Protein–RNA interactions for Protein: Q9BWH6

RPAP1, RNA polymerase II-associated protein 1, humanhuman

Predicted RBP Predictions only

Length 1,393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP1Q9BWH6 AC117434.1-201ENST00000419971 836 ntBASIC6.54□□□□□ -1.36
RPAP1Q9BWH6 PPP2R2DP1-201ENST00000420526 637 ntBASIC6.54□□□□□ -1.36
RPAP1Q9BWH6 LINC02499-201ENST00000502291 763 ntTSL 3 BASIC6.54□□□□□ -1.36
RPAP1Q9BWH6 MTND6P2-201ENST00000512226 524 ntBASIC6.54□□□□□ -1.36
RPAP1Q9BWH6 UQCRB-209ENST00000523920 695 ntTSL 5 BASIC6.54□□□□□ -1.36
RPAP1Q9BWH6 AP002815.1-201ENST00000533740 386 ntTSL 3 BASIC6.54□□□□□ -1.36
RPAP1Q9BWH6 OR7G1-201ENST00000541538 936 ntAPPRIS P1 BASIC6.54□□□□□ -1.36
RPAP1Q9BWH6 AC007406.1-201ENST00000544067 315 ntTSL 3 BASIC6.54□□□□□ -1.36
RPAP1Q9BWH6 HAGLR-211ENST00000549329 609 ntTSL 4 BASIC6.54□□□□□ -1.36
RPAP1Q9BWH6 LINC02310-201ENST00000556762 572 ntTSL 4 BASIC6.54□□□□□ -1.36
RPAP1Q9BWH6 AC108738.1-201ENST00000603703 237 ntBASIC6.54□□□□□ -1.36
RPAP1Q9BWH6 AC109583.2-201ENST00000617367 129 ntBASIC6.54□□□□□ -1.36
RPAP1Q9BWH6 GABRA1-218ENST00000637827 1838 ntAPPRIS P1 TSL 5 BASIC6.54□□□□□ -1.36
RPAP1Q9BWH6 AL161911.1-202ENST00000464488 1534 ntAPPRIS P1 TSL 5 BASIC6.54□□□□□ -1.36
RPAP1Q9BWH6 ZNF677-201ENST00000333952 3422 ntAPPRIS P1 TSL 2 BASIC6.53□□□□□ -1.36
RPAP1Q9BWH6 AC023421.1-201ENST00000590535 1785 ntBASIC6.53□□□□□ -1.36
RPAP1Q9BWH6 AIMP1-202ENST00000394701 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC6.53□□□□□ -1.36
RPAP1Q9BWH6 EPPIN-202ENST00000354280 1987 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
RPAP1Q9BWH6 TCP11-207ENST00000418521 1575 ntAPPRIS ALT2 TSL 5 BASIC6.53□□□□□ -1.36
RPAP1Q9BWH6 SMCO1-201ENST00000397537 1812 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
RPAP1Q9BWH6 SCN1A-217ENST00000637988 8562 ntAPPRIS P3 TSL 5 BASIC6.53□□□□□ -1.36
RPAP1Q9BWH6 SLITRK4-202ENST00000356928 3074 ntAPPRIS P1 TSL 2 BASIC6.53□□□□□ -1.36
RPAP1Q9BWH6 DYNC1I2-207ENST00000410079 2159 ntTSL 2 BASIC6.53□□□□□ -1.36
RPAP1Q9BWH6 MIR550A3-201ENST00000390735 95 ntBASIC6.53□□□□□ -1.36
RPAP1Q9BWH6 EFCAB9-201ENST00000398186 702 ntAPPRIS P1 TSL 3 BASIC6.53□□□□□ -1.36
RPAP1Q9BWH6 AL589647.1-201ENST00000402485 466 ntBASIC6.53□□□□□ -1.36
RPAP1Q9BWH6 AL592402.1-201ENST00000417161 440 ntTSL 4 BASIC6.53□□□□□ -1.36
RPAP1Q9BWH6 SRSF1P1-201ENST00000424058 520 ntBASIC6.53□□□□□ -1.36
RPAP1Q9BWH6 VTI1BP4-201ENST00000427516 527 ntBASIC6.53□□□□□ -1.36
RPAP1Q9BWH6 AL136231.1-201ENST00000429407 730 ntBASIC6.53□□□□□ -1.36
RPAP1Q9BWH6 LINC01436-201ENST00000457157 1048 ntTSL 2 BASIC6.53□□□□□ -1.36
RPAP1Q9BWH6 AC010451.1-201ENST00000509057 556 ntTSL 3 BASIC6.53□□□□□ -1.36
RPAP1Q9BWH6 SNORA70.11-201ENST00000515987 138 ntBASIC6.53□□□□□ -1.36
RPAP1Q9BWH6 SNORA70.13-201ENST00000516116 138 ntBASIC6.53□□□□□ -1.36
RPAP1Q9BWH6 AP003501.1-201ENST00000524453 744 ntTSL 3 BASIC6.53□□□□□ -1.36
RPAP1Q9BWH6 AC027804.1-201ENST00000534653 529 ntTSL 2 BASIC6.53□□□□□ -1.36
RPAP1Q9BWH6 MIR3691-201ENST00000578066 90 ntBASIC6.53□□□□□ -1.36
RPAP1Q9BWH6 AC069307.1-201ENST00000602820 447 ntBASIC6.53□□□□□ -1.36
RPAP1Q9BWH6 AC002128.2-201ENST00000604161 618 ntTSL 5 BASIC6.53□□□□□ -1.36
RPAP1Q9BWH6 AC243654.3-201ENST00000617427 735 ntTSL 5 BASIC6.53□□□□□ -1.36
RPAP1Q9BWH6 PXT1-202ENST00000619547 619 ntAPPRIS ALT2 TSL 1 (best) BASIC6.53□□□□□ -1.36
RPAP1Q9BWH6 ZNF850-202ENST00000591344 7714 ntAPPRIS P3 TSL 1 (best) BASIC6.53□□□□□ -1.36
RPAP1Q9BWH6 OR6C4-203ENST00000641851 4989 ntAPPRIS P1 BASIC6.53□□□□□ -1.36
RPAP1Q9BWH6 NPM1-203ENST00000393820 1598 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
RPAP1Q9BWH6 MCF2L2-202ENST00000414362 3031 ntTSL 2 BASIC6.52□□□□□ -1.37
RPAP1Q9BWH6 FILIP1L-201ENST00000331335 4219 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
RPAP1Q9BWH6 HELZ-207ENST00000580168 6279 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
RPAP1Q9BWH6 ZNF266-207ENST00000592904 4401 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
RPAP1Q9BWH6 SEMA6D-210ENST00000558816 4419 ntTSL 5 BASIC6.52□□□□□ -1.37
RPAP1Q9BWH6 LINS1-214ENST00000561308 1612 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
RPAP1Q9BWH6 AC103591.2-201ENST00000265259 766 ntBASIC6.52□□□□□ -1.37
RPAP1Q9BWH6 NPM1-202ENST00000351986 1237 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
RPAP1Q9BWH6 RNA5SP305-201ENST00000362665 119 ntBASIC6.52□□□□□ -1.37
RPAP1Q9BWH6 RN7SKP115-201ENST00000363177 317 ntBASIC6.52□□□□□ -1.37
RPAP1Q9BWH6 DBIP1-201ENST00000401435 260 ntBASIC6.52□□□□□ -1.37
RPAP1Q9BWH6 HYALP1-201ENST00000417674 1279 ntBASIC6.52□□□□□ -1.37
RPAP1Q9BWH6 LINC01507-201ENST00000417801 446 ntTSL 5 BASIC6.52□□□□□ -1.37
RPAP1Q9BWH6 AC096711.3-201ENST00000420721 582 ntTSL 4 BASIC6.52□□□□□ -1.37
RPAP1Q9BWH6 FAM96AP1-201ENST00000430879 482 ntBASIC6.52□□□□□ -1.37
RPAP1Q9BWH6 AL161457.1-201ENST00000434656 905 ntTSL 5 BASIC6.52□□□□□ -1.37
RPAP1Q9BWH6 PSMD10P3-201ENST00000437000 448 ntBASIC6.52□□□□□ -1.37
RPAP1Q9BWH6 AC018467.1-203ENST00000440785 506 ntTSL 3 BASIC6.52□□□□□ -1.37
RPAP1Q9BWH6 SNRPCP2-201ENST00000504370 475 ntBASIC6.52□□□□□ -1.37
RPAP1Q9BWH6 RNU6-941P-201ENST00000516346 108 ntBASIC6.52□□□□□ -1.37
RPAP1Q9BWH6 MS4A6A-210ENST00000529054 1160 ntTSL 5 BASIC6.52□□□□□ -1.37
RPAP1Q9BWH6 AC039056.1-201ENST00000552704 467 ntTSL 3 BASIC6.52□□□□□ -1.37
RPAP1Q9BWH6 OR11J2P-201ENST00000555298 907 ntBASIC6.52□□□□□ -1.37
RPAP1Q9BWH6 RPL10P14-201ENST00000565265 298 ntBASIC6.52□□□□□ -1.37
RPAP1Q9BWH6 AC106730.2-201ENST00000566641 540 ntBASIC6.52□□□□□ -1.37
RPAP1Q9BWH6 AP002884.5-201ENST00000595053 1132 ntBASIC6.52□□□□□ -1.37
RPAP1Q9BWH6 MIR4435-2HG-220ENST00000609902 603 ntTSL 3 BASIC6.52□□□□□ -1.37
RPAP1Q9BWH6 MAPK6PS2-201ENST00000379571 2060 ntBASIC6.52□□□□□ -1.37
RPAP1Q9BWH6 ZNF493-202ENST00000355504 4386 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
RPAP1Q9BWH6 FAM26D-201ENST00000368596 1353 ntAPPRIS P1 TSL 5 BASIC6.52□□□□□ -1.37
RPAP1Q9BWH6 DLEU7-AS1-201ENST00000413510 1806 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
RPAP1Q9BWH6 CHEK1-216ENST00000534070 3513 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
RPAP1Q9BWH6 LINC02352-202ENST00000559292 1450 ntTSL 5 BASIC6.52□□□□□ -1.37
RPAP1Q9BWH6 ZNF780A-205ENST00000594395 2044 ntAPPRIS ALT2 TSL 2 BASIC6.52□□□□□ -1.37
RPAP1Q9BWH6 CEP295-206ENST00000531700 2890 ntAPPRIS ALT2 TSL 2 BASIC6.51□□□□□ -1.37
RPAP1Q9BWH6 RYR3-202ENST00000415757 15557 ntAPPRIS ALT2 TSL 2 BASIC6.51□□□□□ -1.37
RPAP1Q9BWH6 LINC01013-205ENST00000458028 1345 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
RPAP1Q9BWH6 FNIP1-201ENST00000307954 6366 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
RPAP1Q9BWH6 AC006600.2-201ENST00000624834 2506 ntBASIC6.51□□□□□ -1.37
RPAP1Q9BWH6 AC112255.1-201ENST00000624070 2493 ntBASIC6.51□□□□□ -1.37
RPAP1Q9BWH6 ANK3-216ENST00000503366 5792 ntAPPRIS ALT2 TSL 2 BASIC6.51□□□□□ -1.37
RPAP1Q9BWH6 HIST1H1A-201ENST00000244573 648 ntAPPRIS P1 BASIC6.51□□□□□ -1.37
RPAP1Q9BWH6 IGLV7-43-201ENST00000390298 385 ntAPPRIS P1 BASIC6.51□□□□□ -1.37
RPAP1Q9BWH6 RNU1-149P-201ENST00000390870 161 ntBASIC6.51□□□□□ -1.37
RPAP1Q9BWH6 DUTP5-201ENST00000406790 469 ntBASIC6.51□□□□□ -1.37
RPAP1Q9BWH6 U3.36-201ENST00000408418 213 ntBASIC6.51□□□□□ -1.37
RPAP1Q9BWH6 SLC8A1-AS1-205ENST00000435515 497 ntTSL 3 BASIC6.51□□□□□ -1.37
RPAP1Q9BWH6 GAPDHP25-201ENST00000447061 1001 ntBASIC6.51□□□□□ -1.37
RPAP1Q9BWH6 AC073850.1-201ENST00000449243 255 ntBASIC6.51□□□□□ -1.37
RPAP1Q9BWH6 RPL35AP28-201ENST00000459730 331 ntBASIC6.51□□□□□ -1.37
RPAP1Q9BWH6 AC015864.1-201ENST00000496512 544 ntBASIC6.51□□□□□ -1.37
RPAP1Q9BWH6 SCARNA20.4-201ENST00000516969 131 ntBASIC6.51□□□□□ -1.37
RPAP1Q9BWH6 ARL6IP1P3-201ENST00000524544 560 ntBASIC6.51□□□□□ -1.37
RPAP1Q9BWH6 LINC01493-201ENST00000530102 460 ntTSL 5 BASIC6.51□□□□□ -1.37
RPAP1Q9BWH6 AP001992.1-201ENST00000533875 723 ntTSL 5 BASIC6.51□□□□□ -1.37
RPAP1Q9BWH6 AC034102.2-201ENST00000548861 489 ntAPPRIS P1 TSL 5 BASIC6.51□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 70.9 ms