Protein–RNA interactions for Protein: Q96M95

CCDC42, Coiled-coil domain-containing protein 42, humanhuman

Predictions only

Length 316 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC42Q96M95 RN7SL170P-201ENST00000487098 295 ntBASIC5.66□□□□□ -1.5
CCDC42Q96M95 LINC02117-201ENST00000513673 540 ntTSL 4 BASIC5.66□□□□□ -1.5
CCDC42Q96M95 MYBPC1-208ENST00000547405 3834 ntAPPRIS ALT2 TSL 1 (best) BASIC5.66□□□□□ -1.5
CCDC42Q96M95 LSM3P2-201ENST00000551246 273 ntBASIC5.66□□□□□ -1.5
CCDC42Q96M95 AC026992.1-201ENST00000558269 571 ntTSL 2 BASIC5.66□□□□□ -1.5
CCDC42Q96M95 AC090415.2-201ENST00000584078 374 ntTSL 3 BASIC5.66□□□□□ -1.5
CCDC42Q96M95 AP000648.2-201ENST00000624182 404 ntBASIC5.66□□□□□ -1.5
CCDC42Q96M95 MTCO1P1-201ENST00000624263 1081 ntBASIC5.66□□□□□ -1.5
CCDC42Q96M95 MS4A1-207ENST00000532073 2560 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
CCDC42Q96M95 CFAP47-203ENST00000378653 9943 ntAPPRIS P2 TSL 5 BASIC5.66□□□□□ -1.5
CCDC42Q96M95 CASC1-201ENST00000320267 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC5.66□□□□□ -1.5
CCDC42Q96M95 NXT2-201ENST00000218004 2692 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
CCDC42Q96M95 DLGAP5-202ENST00000395425 2954 ntAPPRIS ALT2 TSL 1 (best) BASIC5.66□□□□□ -1.5
CCDC42Q96M95 ENKUR-205ENST00000615958 3294 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
CCDC42Q96M95 LTN1-202ENST00000389194 7749 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
CCDC42Q96M95 LINC01553-203ENST00000521074 4329 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
CCDC42Q96M95 AL132656.2-201ENST00000482985 1837 ntTSL 5 BASIC5.65□□□□□ -1.5
CCDC42Q96M95 MED23-203ENST00000368058 4576 ntTSL 5 BASIC5.65□□□□□ -1.5
CCDC42Q96M95 SLC10A7-203ENST00000432059 3747 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
CCDC42Q96M95 CLDND1-208ENST00000503004 2818 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
CCDC42Q96M95 CDC23-202ENST00000394886 3155 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
CCDC42Q96M95 PRH2-201ENST00000381847 641 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
CCDC42Q96M95 AL133388.1-201ENST00000404509 287 ntBASIC5.65□□□□□ -1.5
CCDC42Q96M95 OR6E1P-201ENST00000414424 923 ntBASIC5.65□□□□□ -1.5
CCDC42Q96M95 AL596448.1-201ENST00000415024 392 ntBASIC5.65□□□□□ -1.5
CCDC42Q96M95 PPP2R2DP1-201ENST00000420526 637 ntBASIC5.65□□□□□ -1.5
CCDC42Q96M95 TMEM196-203ENST00000422233 775 ntTSL 5 BASIC5.65□□□□□ -1.5
CCDC42Q96M95 AL353693.1-201ENST00000429567 442 ntTSL 3 BASIC5.65□□□□□ -1.5
CCDC42Q96M95 AL161722.2-201ENST00000434731 981 ntBASIC5.65□□□□□ -1.5
CCDC42Q96M95 AL139161.2-201ENST00000438371 740 ntTSL 3 BASIC5.65□□□□□ -1.5
CCDC42Q96M95 AC012512.1-201ENST00000446594 718 ntBASIC5.65□□□□□ -1.5
CCDC42Q96M95 YRDCP3-201ENST00000456507 480 ntBASIC5.65□□□□□ -1.5
CCDC42Q96M95 AC108161.1-201ENST00000461060 402 ntBASIC5.65□□□□□ -1.5
CCDC42Q96M95 RPL7P40-201ENST00000481703 745 ntBASIC5.65□□□□□ -1.5
CCDC42Q96M95 AC112206.2-204ENST00000504068 793 ntTSL 3 BASIC5.65□□□□□ -1.5
CCDC42Q96M95 FGB-207ENST00000509493 1164 ntTSL 5 BASIC5.65□□□□□ -1.5
CCDC42Q96M95 GYPB-213ENST00000513128 360 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
CCDC42Q96M95 TMEM97P2-201ENST00000517841 403 ntBASIC5.65□□□□□ -1.5
CCDC42Q96M95 AC103855.1-201ENST00000525926 564 ntTSL 2 BASIC5.65□□□□□ -1.5
CCDC42Q96M95 TMEM126B-211ENST00000534341 1273 ntTSL 2 BASIC5.65□□□□□ -1.5
CCDC42Q96M95 AC004862.1-203ENST00000598433 1020 ntTSL 5 BASIC5.65□□□□□ -1.5
CCDC42Q96M95 LINC02112-204ENST00000606222 429 ntTSL 5 BASIC5.65□□□□□ -1.5
CCDC42Q96M95 AL596275.2-207ENST00000641188 675 ntBASIC5.65□□□□□ -1.5
CCDC42Q96M95 ZNF107-201ENST00000344930 5174 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
CCDC42Q96M95 VPS13D-214ENST00000620676 16320 ntAPPRIS P4 TSL 1 (best) BASIC5.65□□□□□ -1.51
CCDC42Q96M95 ZNF117-201ENST00000282869 9080 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
CCDC42Q96M95 OR4K1-203ENST00000641429 1358 ntAPPRIS P1 BASIC5.65□□□□□ -1.51
CCDC42Q96M95 TRIQK-206ENST00000518748 3563 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
CCDC42Q96M95 CNGA1-202ENST00000402813 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC5.65□□□□□ -1.51
CCDC42Q96M95 R3HDM1-204ENST00000410054 4442 ntTSL 2 BASIC5.64□□□□□ -1.51
CCDC42Q96M95 DNAAF4-CCPG1-201ENST00000565113 4589 ntTSL 2 BASIC5.64□□□□□ -1.51
CCDC42Q96M95 OBSCN-205ENST00000422127 24060 ntTSL 5 BASIC5.64□□□□□ -1.51
CCDC42Q96M95 AC010127.1-209ENST00000447809 2305 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
CCDC42Q96M95 AL731532.2-201ENST00000623542 1953 ntBASIC5.64□□□□□ -1.51
CCDC42Q96M95 SYT14-206ENST00000537238 5208 ntAPPRIS ALT2 TSL 5 BASIC5.64□□□□□ -1.51
CCDC42Q96M95 LCMT1-AS2-202ENST00000565214 5666 ntBASIC5.64□□□□□ -1.51
CCDC42Q96M95 G6PC2-202ENST00000375363 1214 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
CCDC42Q96M95 CEACAM7-202ENST00000401731 1236 ntAPPRIS P1 TSL 2 BASIC5.64□□□□□ -1.51
CCDC42Q96M95 NACAP7-201ENST00000407371 609 ntBASIC5.64□□□□□ -1.51
CCDC42Q96M95 CTSL3P-202ENST00000412179 788 ntBASIC5.64□□□□□ -1.51
CCDC42Q96M95 AC109779.1-201ENST00000414475 573 ntTSL 5 BASIC5.64□□□□□ -1.51
CCDC42Q96M95 BMS1P17-202ENST00000416720 316 ntBASIC5.64□□□□□ -1.51
CCDC42Q96M95 MARK2P12-201ENST00000420129 585 ntBASIC5.64□□□□□ -1.51
CCDC42Q96M95 AL606970.4-201ENST00000424343 455 ntTSL 2 BASIC5.64□□□□□ -1.51
CCDC42Q96M95 PRUNEP1-201ENST00000425846 705 ntBASIC5.64□□□□□ -1.51
CCDC42Q96M95 ARPP21-215ENST00000432682 1015 ntTSL 5 BASIC5.64□□□□□ -1.51
CCDC42Q96M95 AL450384.1-201ENST00000433526 413 ntTSL 2 BASIC5.64□□□□□ -1.51
CCDC42Q96M95 LINC01911-201ENST00000450667 806 ntTSL 5 BASIC5.64□□□□□ -1.51
CCDC42Q96M95 AC005165.2-201ENST00000466070 380 ntBASIC5.64□□□□□ -1.51
CCDC42Q96M95 AC138866.2-201ENST00000508650 584 ntBASIC5.64□□□□□ -1.51
CCDC42Q96M95 AC006427.1-201ENST00000514359 712 ntBASIC5.64□□□□□ -1.51
CCDC42Q96M95 MSC-AS1-205ENST00000519068 569 ntTSL 3 BASIC5.64□□□□□ -1.51
CCDC42Q96M95 AP003696.1-201ENST00000519337 770 ntTSL 3 BASIC5.64□□□□□ -1.51
CCDC42Q96M95 HGNC:24955-208ENST00000521585 1260 ntTSL 4 BASIC5.64□□□□□ -1.51
CCDC42Q96M95 POLR2K-203ENST00000522439 543 ntTSL 2 BASIC5.64□□□□□ -1.51
CCDC42Q96M95 TPPP2-208ENST00000530140 703 ntAPPRIS P1 TSL 2 BASIC5.64□□□□□ -1.51
CCDC42Q96M95 PIWIL4-203ENST00000537419 831 ntTSL 2 BASIC5.64□□□□□ -1.51
CCDC42Q96M95 AL135838.1-201ENST00000556080 235 ntTSL 3 BASIC5.64□□□□□ -1.51
CCDC42Q96M95 UBA2-208ENST00000592791 910 ntTSL 2 BASIC5.64□□□□□ -1.51
CCDC42Q96M95 AC108865.2-201ENST00000606881 432 ntBASIC5.64□□□□□ -1.51
CCDC42Q96M95 AC048341.3-201ENST00000619323 491 ntBASIC5.64□□□□□ -1.51
CCDC42Q96M95 BX005214.3-202ENST00000619809 325 ntBASIC5.64□□□□□ -1.51
CCDC42Q96M95 CU639417.4-201ENST00000623928 207 ntBASIC5.64□□□□□ -1.51
CCDC42Q96M95 AC063952.1-204ENST00000635496 927 ntTSL 5 BASIC5.64□□□□□ -1.51
CCDC42Q96M95 LGALS8-222ENST00000527974 1349 ntAPPRIS P4 TSL 5 BASIC5.64□□□□□ -1.51
CCDC42Q96M95 GAS2L3-203ENST00000539410 2229 ntAPPRIS P1 TSL 2 BASIC5.64□□□□□ -1.51
CCDC42Q96M95 THAP12P5-201ENST00000405864 2275 ntBASIC5.64□□□□□ -1.51
CCDC42Q96M95 SRPK2-201ENST00000357311 3700 ntAPPRIS P3 TSL 1 (best) BASIC5.64□□□□□ -1.51
CCDC42Q96M95 GJA9-202ENST00000360786 1901 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
CCDC42Q96M95 ANKRD49-208ENST00000544253 3002 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
CCDC42Q96M95 NOSTRIN-206ENST00000444448 2537 ntTSL 5 BASIC5.64□□□□□ -1.51
CCDC42Q96M95 ANK2-202ENST00000357077 14196 ntAPPRIS P3 TSL 1 (best) BASIC5.64□□□□□ -1.51
CCDC42Q96M95 SMARCA2-206ENST00000382185 1584 ntTSL 2 BASIC5.63□□□□□ -1.51
CCDC42Q96M95 R3HCC1L-202ENST00000314594 3198 ntAPPRIS P1 TSL 5 BASIC5.63□□□□□ -1.51
CCDC42Q96M95 RAD51AP1-202ENST00000352618 2113 ntAPPRIS P3 TSL 1 (best) BASIC5.63□□□□□ -1.51
CCDC42Q96M95 SKP1-202ENST00000353411 9474 ntAPPRIS P4 TSL 1 (best) BASIC5.63□□□□□ -1.51
CCDC42Q96M95 OR13C1P-202ENST00000641378 2919 ntBASIC5.63□□□□□ -1.51
CCDC42Q96M95 SELL-201ENST00000236147 2436 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
CCDC42Q96M95 ADAM29-202ENST00000404450 3171 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
CCDC42Q96M95 SSX5-202ENST00000347757 1261 ntAPPRIS ALT2 TSL 5 BASIC5.63□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 126.1 ms