Protein–RNA interactions for Protein: Q8NE35

CPEB3, Cytoplasmic polyadenylation element-binding protein 3, humanhuman

Known RBP Predictions only

Length 698 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPEB3Q8NE35 AC009779.8-201ENST00000641684 4384 ntBASIC5.6□□□□□ -1.51
CPEB3Q8NE35 AL356317.1-201ENST00000396110 1436 ntBASIC5.6□□□□□ -1.51
CPEB3Q8NE35 GVINP1-201ENST00000526769 8438 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
CPEB3Q8NE35 SREK1IP1-204ENST00000513458 6876 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
CPEB3Q8NE35 IL2-201ENST00000226730 1029 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
CPEB3Q8NE35 DEFB106A-201ENST00000335186 303 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
CPEB3Q8NE35 DEFB106B-201ENST00000335479 316 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
CPEB3Q8NE35 ANKRD36P1-201ENST00000344424 659 ntBASIC5.6□□□□□ -1.51
CPEB3Q8NE35 CCL20-201ENST00000358813 800 ntAPPRIS P3 TSL 1 (best) BASIC5.6□□□□□ -1.51
CPEB3Q8NE35 RNU6-932P-201ENST00000391108 106 ntBASIC5.6□□□□□ -1.51
CPEB3Q8NE35 AL121978.1-201ENST00000402778 359 ntBASIC5.6□□□□□ -1.51
CPEB3Q8NE35 NACAP7-201ENST00000407371 609 ntBASIC5.6□□□□□ -1.51
CPEB3Q8NE35 Y_RNA.619-201ENST00000410951 90 ntBASIC5.6□□□□□ -1.51
CPEB3Q8NE35 AC096669.1-202ENST00000413708 616 ntTSL 2 BASIC5.6□□□□□ -1.51
CPEB3Q8NE35 TEX41-202ENST00000414256 604 ntTSL 5 BASIC5.6□□□□□ -1.51
CPEB3Q8NE35 RBMS3-AS1-201ENST00000414547 554 ntTSL 4 BASIC5.6□□□□□ -1.51
CPEB3Q8NE35 RPS7P9-201ENST00000414704 586 ntBASIC5.6□□□□□ -1.51
CPEB3Q8NE35 RPL6-202ENST00000424576 1074 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
CPEB3Q8NE35 AC097721.1-201ENST00000427150 1253 ntBASIC5.6□□□□□ -1.51
CPEB3Q8NE35 AC016582.1-203ENST00000433142 502 ntTSL 3 BASIC5.6□□□□□ -1.51
CPEB3Q8NE35 AL138799.4-201ENST00000443939 643 ntTSL 3 BASIC5.6□□□□□ -1.51
CPEB3Q8NE35 CHODL-AS1-201ENST00000447175 1117 ntTSL 2 BASIC5.6□□□□□ -1.51
CPEB3Q8NE35 MRPL35P2-201ENST00000448009 511 ntBASIC5.6□□□□□ -1.51
CPEB3Q8NE35 AC074286.1-201ENST00000452002 544 ntTSL 4 BASIC5.6□□□□□ -1.51
CPEB3Q8NE35 L29074.1-201ENST00000456072 534 ntTSL 5 BASIC5.6□□□□□ -1.51
CPEB3Q8NE35 GTF2IP12-201ENST00000456547 356 ntBASIC5.6□□□□□ -1.51
CPEB3Q8NE35 MTCO2P18-201ENST00000457151 658 ntBASIC5.6□□□□□ -1.51
CPEB3Q8NE35 RPSAP39-201ENST00000467439 883 ntBASIC5.6□□□□□ -1.51
CPEB3Q8NE35 MTND3P7-201ENST00000474435 343 ntBASIC5.6□□□□□ -1.51
CPEB3Q8NE35 LINC02025-201ENST00000488348 360 ntTSL 3 BASIC5.6□□□□□ -1.51
CPEB3Q8NE35 AC093890.1-201ENST00000502554 540 ntBASIC5.6□□□□□ -1.51
CPEB3Q8NE35 PGRMC2-204ENST00000503872 1028 ntTSL 3 BASIC5.6□□□□□ -1.51
CPEB3Q8NE35 NACAP5-201ENST00000509863 636 ntBASIC5.6□□□□□ -1.51
CPEB3Q8NE35 XKRY-201ENST00000510392 1100 ntBASIC5.6□□□□□ -1.51
CPEB3Q8NE35 AC010625.1-201ENST00000511296 403 ntBASIC5.6□□□□□ -1.51
CPEB3Q8NE35 LINC02057-202ENST00000511794 577 ntTSL 3 BASIC5.6□□□□□ -1.51
CPEB3Q8NE35 AC010261.1-201ENST00000514411 457 ntTSL 5 BASIC5.6□□□□□ -1.51
CPEB3Q8NE35 AC138517.1-201ENST00000515724 568 ntBASIC5.6□□□□□ -1.51
CPEB3Q8NE35 AC068413.1-201ENST00000517739 776 ntTSL 5 BASIC5.6□□□□□ -1.51
CPEB3Q8NE35 AC022915.3-201ENST00000518620 594 ntTSL 4 BASIC5.6□□□□□ -1.51
CPEB3Q8NE35 AB015752.1-201ENST00000521975 578 ntTSL 5 BASIC5.6□□□□□ -1.51
CPEB3Q8NE35 AC105177.1-201ENST00000523110 555 ntTSL 4 BASIC5.6□□□□□ -1.51
CPEB3Q8NE35 AP003100.1-201ENST00000524772 832 ntTSL 3 BASIC5.6□□□□□ -1.51
CPEB3Q8NE35 KCTD9P4-201ENST00000526766 1166 ntBASIC5.6□□□□□ -1.51
CPEB3Q8NE35 ERP27-202ENST00000540097 993 ntTSL 2 BASIC5.6□□□□□ -1.51
CPEB3Q8NE35 AC073916.1-201ENST00000545095 130 ntBASIC5.6□□□□□ -1.51
CPEB3Q8NE35 G2E3-AS1-201ENST00000548631 579 ntTSL 3 BASIC5.6□□□□□ -1.51
CPEB3Q8NE35 TPRX1P1-201ENST00000557620 319 ntBASIC5.6□□□□□ -1.51
CPEB3Q8NE35 AC018558.3-201ENST00000567902 572 ntTSL 4 BASIC5.6□□□□□ -1.51
CPEB3Q8NE35 RN7SL475P-201ENST00000583379 298 ntBASIC5.6□□□□□ -1.51
CPEB3Q8NE35 AC093484.5-201ENST00000585048 304 ntTSL 3 BASIC5.6□□□□□ -1.51
CPEB3Q8NE35 AC091132.1-201ENST00000588189 547 ntTSL 5 BASIC5.6□□□□□ -1.51
CPEB3Q8NE35 AL161896.1-201ENST00000597248 508 ntTSL 4 BASIC5.6□□□□□ -1.51
CPEB3Q8NE35 AC073046.2-201ENST00000604756 527 ntBASIC5.6□□□□□ -1.51
CPEB3Q8NE35 AP003392.5-201ENST00000607857 415 ntBASIC5.6□□□□□ -1.51
CPEB3Q8NE35 HTR1DP1-201ENST00000616500 888 ntBASIC5.6□□□□□ -1.51
CPEB3Q8NE35 AC007490.1-201ENST00000624321 703 ntBASIC5.6□□□□□ -1.51
CPEB3Q8NE35 AC018659.2-201ENST00000624690 715 ntBASIC5.6□□□□□ -1.51
CPEB3Q8NE35 TTC33-206ENST00000636863 1149 ntTSL 5 BASIC5.6□□□□□ -1.51
CPEB3Q8NE35 LINC02341-202ENST00000637462 1295 ntTSL 5 BASIC5.6□□□□□ -1.51
CPEB3Q8NE35 OR5AS1-202ENST00000641320 7860 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
CPEB3Q8NE35 OR51I2-202ENST00000641930 3302 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
CPEB3Q8NE35 ZCCHC6-206ENST00000375963 5379 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
CPEB3Q8NE35 CLHC1-204ENST00000407122 2139 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
CPEB3Q8NE35 CLCC1-204ENST00000369968 4151 ntTSL 5 BASIC5.6□□□□□ -1.51
CPEB3Q8NE35 HELLS-205ENST00000394036 3131 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
CPEB3Q8NE35 CLRN1-AS1-201ENST00000465576 2045 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
CPEB3Q8NE35 AL591135.1-201ENST00000401578 5914 ntBASIC5.6□□□□□ -1.51
CPEB3Q8NE35 SERPINB7-207ENST00000546027 1951 ntAPPRIS P1 TSL 2 BASIC5.6□□□□□ -1.51
CPEB3Q8NE35 PTER-202ENST00000378000 3777 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
CPEB3Q8NE35 ALG6-201ENST00000263440 1895 ntAPPRIS ALT1 TSL 5 BASIC5.6□□□□□ -1.51
CPEB3Q8NE35 AC119674.1-202ENST00000641333 1860 ntBASIC5.6□□□□□ -1.51
CPEB3Q8NE35 P2RY14-202ENST00000424796 1780 ntAPPRIS P1 TSL 2 BASIC5.6□□□□□ -1.51
CPEB3Q8NE35 PPFIBP1-201ENST00000228425 5933 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
CPEB3Q8NE35 RNF145-201ENST00000274542 3364 ntTSL 2 BASIC5.59□□□□□ -1.51
CPEB3Q8NE35 FAM216B-202ENST00000537894 3300 ntAPPRIS P1 TSL 4 BASIC5.59□□□□□ -1.51
CPEB3Q8NE35 DOPEY1-201ENST00000237163 7995 ntAPPRIS ALT1 TSL 5 BASIC5.59□□□□□ -1.51
CPEB3Q8NE35 TRIQK-201ENST00000378861 1596 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
CPEB3Q8NE35 TNFSF11-202ENST00000358545 1520 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
CPEB3Q8NE35 CCDC150-202ENST00000409270 2243 ntAPPRIS ALT2 TSL 5 BASIC5.59□□□□□ -1.51
CPEB3Q8NE35 AL592429.1-201ENST00000403909 1473 ntBASIC5.59□□□□□ -1.51
CPEB3Q8NE35 KIF20A-205ENST00000508792 2935 ntTSL 2 BASIC5.59□□□□□ -1.51
CPEB3Q8NE35 DICER1-202ENST00000393063 10220 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
CPEB3Q8NE35 LINC01153-201ENST00000429809 2864 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
CPEB3Q8NE35 NDUFA5-207ENST00000471770 5608 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
CPEB3Q8NE35 UGT2B11-201ENST00000446444 2088 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
CPEB3Q8NE35 LINC02426-201ENST00000550506 1372 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
CPEB3Q8NE35 ZNF542P-204ENST00000482727 1305 ntBASIC5.59□□□□□ -1.51
CPEB3Q8NE35 ZNF542P-202ENST00000467807 3209 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
CPEB3Q8NE35 STAG3L4-201ENST00000352103 530 ntBASIC5.59□□□□□ -1.51
CPEB3Q8NE35 RNA5SP485-201ENST00000365053 119 ntBASIC5.59□□□□□ -1.51
CPEB3Q8NE35 ST3GAL3-212ENST00000372362 468 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
CPEB3Q8NE35 LYZL1-201ENST00000375500 815 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
CPEB3Q8NE35 NUDT5-203ENST00000378940 1126 ntTSL 5 BASIC5.59□□□□□ -1.51
CPEB3Q8NE35 RNU6-31P-201ENST00000384388 108 ntBASIC5.59□□□□□ -1.51
CPEB3Q8NE35 CAV1-203ENST00000393468 845 ntAPPRIS ALT1 TSL 1 (best) BASIC5.59□□□□□ -1.51
CPEB3Q8NE35 SMARCE1P6-201ENST00000398372 1216 ntBASIC5.59□□□□□ -1.51
CPEB3Q8NE35 MTCO1P56-201ENST00000401674 224 ntBASIC5.59□□□□□ -1.51
CPEB3Q8NE35 AL049649.1-202ENST00000412405 414 ntTSL 3 BASIC5.59□□□□□ -1.51
CPEB3Q8NE35 SETP15-201ENST00000412724 337 ntBASIC5.59□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 111 ms