Protein–RNA interactions for Protein: Q06546

GABPA, GA-binding protein alpha chain, humanhuman

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABPAQ06546 CCAR1-217ENST00000543719 3521 ntTSL 5 BASIC6.21□□□□□ -1.42
GABPAQ06546 SNURFL-201ENST00000309296 343 ntBASIC6.21□□□□□ -1.42
GABPAQ06546 LINC01442-201ENST00000414201 704 ntTSL 2 BASIC6.21□□□□□ -1.42
GABPAQ06546 AC021876.1-201ENST00000425959 359 ntBASIC6.21□□□□□ -1.42
GABPAQ06546 RPS27P18-201ENST00000431701 247 ntBASIC6.21□□□□□ -1.42
GABPAQ06546 GTF2F2P1-201ENST00000511083 675 ntBASIC6.21□□□□□ -1.42
GABPAQ06546 AC093535.1-203ENST00000512500 730 ntTSL 3 BASIC6.21□□□□□ -1.42
GABPAQ06546 AP002373.2-201ENST00000541631 1060 ntBASIC6.21□□□□□ -1.42
GABPAQ06546 AC092490.3-201ENST00000545370 572 ntBASIC6.21□□□□□ -1.42
GABPAQ06546 AC025263.2-201ENST00000550437 548 ntAPPRIS P1 TSL 5 BASIC6.21□□□□□ -1.42
GABPAQ06546 GPATCH2L-203ENST00000553588 776 ntTSL 2 BASIC6.21□□□□□ -1.42
GABPAQ06546 OR1F2P-201ENST00000570470 933 ntBASIC6.21□□□□□ -1.42
GABPAQ06546 MIR4646-201ENST00000580775 63 ntBASIC6.21□□□□□ -1.42
GABPAQ06546 AC025857.2-201ENST00000602711 238 ntBASIC6.21□□□□□ -1.42
GABPAQ06546 AC108738.1-201ENST00000603703 237 ntBASIC6.21□□□□□ -1.42
GABPAQ06546 AC009027.1-201ENST00000604510 479 ntBASIC6.21□□□□□ -1.42
GABPAQ06546 ZNF26-201ENST00000328654 17601 ntAPPRIS P3 TSL 1 (best) BASIC6.21□□□□□ -1.42
GABPAQ06546 LMO3-225ENST00000541295 3498 ntTSL 2 BASIC6.21□□□□□ -1.42
GABPAQ06546 SLC1A3-215ENST00000612708 3832 ntTSL 5 BASIC6.21□□□□□ -1.42
GABPAQ06546 NAT2-201ENST00000286479 1322 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
GABPAQ06546 GSTM2-206ENST00000442650 1478 ntTSL 5 BASIC6.21□□□□□ -1.42
GABPAQ06546 GJA9-202ENST00000360786 1901 ntAPPRIS P1 BASIC6.21□□□□□ -1.42
GABPAQ06546 TEX41-210ENST00000451774 2098 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
GABPAQ06546 KCNH5-201ENST00000322893 11290 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
GABPAQ06546 RAPGEF4-213ENST00000535187 3707 ntTSL 2 BASIC6.21□□□□□ -1.42
GABPAQ06546 NRDE2-201ENST00000354366 14208 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
GABPAQ06546 WDR12-201ENST00000261015 8100 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
GABPAQ06546 AC106799.3-201ENST00000562127 3300 ntTSL 2 BASIC6.2□□□□□ -1.42
GABPAQ06546 SCN2A-203ENST00000375437 8792 ntAPPRIS ALT1 TSL 5 BASIC6.2□□□□□ -1.42
GABPAQ06546 DPP8-203ENST00000341861 8699 ntAPPRIS P4 TSL 2 BASIC6.2□□□□□ -1.42
GABPAQ06546 AP001157.1-201ENST00000550837 2339 ntBASIC6.2□□□□□ -1.42
GABPAQ06546 AC239868.2-201ENST00000564237 4527 ntBASIC6.2□□□□□ -1.42
GABPAQ06546 LGALS8-220ENST00000526634 1852 ntAPPRIS ALT2 TSL 5 BASIC6.2□□□□□ -1.42
GABPAQ06546 OR10A3-202ENST00000642047 2650 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
GABPAQ06546 HCFC2P1-201ENST00000392864 1592 ntBASIC6.2□□□□□ -1.42
GABPAQ06546 TEDDM1-201ENST00000367565 2500 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
GABPAQ06546 MUC17-201ENST00000306151 14247 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
GABPAQ06546 HDAC9-203ENST00000406072 4102 ntTSL 5 BASIC6.2□□□□□ -1.42
GABPAQ06546 VPS41-203ENST00000395969 3181 ntTSL 5 BASIC6.2□□□□□ -1.42
GABPAQ06546 RNU4-4P-201ENST00000364588 130 ntBASIC6.2□□□□□ -1.42
GABPAQ06546 SPRR2G-201ENST00000368748 568 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
GABPAQ06546 TRAJ58-201ENST00000390481 63 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
GABPAQ06546 PPP3R1-203ENST00000409752 851 ntTSL 3 BASIC6.2□□□□□ -1.42
GABPAQ06546 IFNA17-201ENST00000413767 980 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
GABPAQ06546 ATP6V1G1P7-201ENST00000415853 349 ntBASIC6.2□□□□□ -1.42
GABPAQ06546 AC124944.2-201ENST00000429866 1242 ntBASIC6.2□□□□□ -1.42
GABPAQ06546 AC097484.1-201ENST00000471148 389 ntBASIC6.2□□□□□ -1.42
GABPAQ06546 AADACP1-204ENST00000483636 1285 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
GABPAQ06546 GYPB-202ENST00000502664 521 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
GABPAQ06546 AC012629.1-201ENST00000503953 342 ntTSL 3 BASIC6.2□□□□□ -1.42
GABPAQ06546 AC084871.1-201ENST00000508020 628 ntTSL 3 BASIC6.2□□□□□ -1.42
GABPAQ06546 SPRY4-AS1-205ENST00000514303 152 ntTSL 3 BASIC6.2□□□□□ -1.42
GABPAQ06546 OR5AZ1P-201ENST00000527448 943 ntBASIC6.2□□□□□ -1.42
GABPAQ06546 OR5D15P-201ENST00000531671 942 ntBASIC6.2□□□□□ -1.42
GABPAQ06546 MIR4307HG-201ENST00000548170 822 ntTSL 3 BASIC6.2□□□□□ -1.42
GABPAQ06546 AC034102.2-201ENST00000548861 489 ntAPPRIS P1 TSL 5 BASIC6.2□□□□□ -1.42
GABPAQ06546 AC016987.1-201ENST00000558587 499 ntTSL 2 BASIC6.2□□□□□ -1.42
GABPAQ06546 SETP3-201ENST00000581726 813 ntBASIC6.2□□□□□ -1.42
GABPAQ06546 AC009597.2-201ENST00000604659 592 ntBASIC6.2□□□□□ -1.42
GABPAQ06546 AC000095.2-202ENST00000637415 154 ntBASIC6.2□□□□□ -1.42
GABPAQ06546 TEX26-201ENST00000380473 1478 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
GABPAQ06546 AC092070.2-203ENST00000598377 3644 ntBASIC6.2□□□□□ -1.42
GABPAQ06546 RAPGEF4-215ENST00000540783 3974 ntTSL 2 BASIC6.2□□□□□ -1.42
GABPAQ06546 GTPBP10-201ENST00000222511 7531 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
GABPAQ06546 CPSF2-201ENST00000298875 13035 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
GABPAQ06546 RPL7-204ENST00000396467 1526 ntTSL 3 BASIC6.2□□□□□ -1.42
GABPAQ06546 NBPF26-202ENST00000611287 2701 ntTSL 5 BASIC6.19□□□□□ -1.42
GABPAQ06546 NBPF14-211ENST00000621070 2701 ntTSL 5 BASIC6.19□□□□□ -1.42
GABPAQ06546 ARFGEF2-201ENST00000371917 8852 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
GABPAQ06546 TRPC4-201ENST00000338947 2912 ntTSL 5 BASIC6.19□□□□□ -1.42
GABPAQ06546 SELL-201ENST00000236147 2436 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
GABPAQ06546 AC048341.2-201ENST00000550290 8693 ntTSL 4 BASIC6.19□□□□□ -1.42
GABPAQ06546 NTRK3-205ENST00000394480 19984 ntAPPRIS P3 TSL 5 BASIC6.19□□□□□ -1.42
GABPAQ06546 ZEB2-241ENST00000637304 9158 ntTSL 5 BASIC6.19□□□□□ -1.42
GABPAQ06546 NUP37-201ENST00000251074 1203 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
GABPAQ06546 AC092681.1-201ENST00000297369 291 ntBASIC6.19□□□□□ -1.42
GABPAQ06546 OR8I2-201ENST00000302124 1010 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
GABPAQ06546 RN7SKP104-201ENST00000362605 328 ntBASIC6.19□□□□□ -1.42
GABPAQ06546 USMG5-203ENST00000369811 635 ntAPPRIS P1 TSL 2 BASIC6.19□□□□□ -1.42
GABPAQ06546 MIR550A3-201ENST00000390735 95 ntBASIC6.19□□□□□ -1.42
GABPAQ06546 AL645733.1-201ENST00000402250 217 ntBASIC6.19□□□□□ -1.42
GABPAQ06546 AC092111.3-201ENST00000402465 496 ntAPPRIS P1 TSL 2 BASIC6.19□□□□□ -1.42
GABPAQ06546 RNU6ATAC7P-201ENST00000408111 127 ntBASIC6.19□□□□□ -1.42
GABPAQ06546 AC093162.1-201ENST00000419682 124 ntBASIC6.19□□□□□ -1.42
GABPAQ06546 LINC01690-201ENST00000424837 576 ntTSL 2 BASIC6.19□□□□□ -1.42
GABPAQ06546 AC008073.2-201ENST00000428344 792 ntTSL 5 BASIC6.19□□□□□ -1.42
GABPAQ06546 TEX41-206ENST00000432608 661 ntTSL 3 BASIC6.19□□□□□ -1.42
GABPAQ06546 NOP56P2-201ENST00000447491 769 ntBASIC6.19□□□□□ -1.42
GABPAQ06546 RN7SKP66-201ENST00000516681 231 ntBASIC6.19□□□□□ -1.42
GABPAQ06546 AP000676.2-201ENST00000529711 301 ntBASIC6.19□□□□□ -1.42
GABPAQ06546 AC006511.5-202ENST00000546339 1198 ntTSL 5 BASIC6.19□□□□□ -1.42
GABPAQ06546 NQO1-206ENST00000564043 892 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
GABPAQ06546 OCLM-201ENST00000574641 884 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
GABPAQ06546 AC104984.1-201ENST00000581633 697 ntTSL 3 BASIC6.19□□□□□ -1.42
GABPAQ06546 AL356608.1-201ENST00000610034 820 ntBASIC6.19□□□□□ -1.42
GABPAQ06546 AC015660.5-201ENST00000623238 564 ntBASIC6.19□□□□□ -1.42
GABPAQ06546 TEX41-254ENST00000626394 423 ntTSL 5 BASIC6.19□□□□□ -1.42
GABPAQ06546 AC115220.1-201ENST00000330020 1453 ntAPPRIS P1 TSL 3 BASIC6.19□□□□□ -1.42
GABPAQ06546 WDR63-201ENST00000294664 2995 ntAPPRIS P3 TSL 1 (best) BASIC6.19□□□□□ -1.42
GABPAQ06546 DAZ1-206ENST00000620725 1891 ntTSL 5 BASIC6.19□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 88 ms