Protein–RNA interactions for Protein: P55854

SUMO3, Small ubiquitin-related modifier 3, humanhuman

Predicted RBP Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO3P55854 KCNQ3-205ENST00000621976 10659 ntAPPRIS ALT2 TSL 5 BASIC5.63□□□□□ -1.51
SUMO3P55854 OR2T5-201ENST00000641363 2525 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
SUMO3P55854 OR4N2-201ENST00000315947 924 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
SUMO3P55854 LINC01699-201ENST00000319701 259 ntTSL 2 BASIC5.63□□□□□ -1.51
SUMO3P55854 TERB2-201ENST00000340827 1281 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
SUMO3P55854 SNORA62.2-201ENST00000364672 152 ntBASIC5.63□□□□□ -1.51
SUMO3P55854 S100A5-201ENST00000368717 506 ntAPPRIS P1 TSL 3 BASIC5.63□□□□□ -1.51
SUMO3P55854 TINAG-203ENST00000370869 782 ntTSL 3 BASIC5.63□□□□□ -1.51
SUMO3P55854 SNORD116-12-201ENST00000384468 92 ntBASIC5.63□□□□□ -1.51
SUMO3P55854 MIR513B-201ENST00000385136 84 ntBASIC5.63□□□□□ -1.51
SUMO3P55854 PDC-201ENST00000391997 1242 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
SUMO3P55854 AL136310.1-201ENST00000404926 654 ntBASIC5.63□□□□□ -1.51
SUMO3P55854 RN7SKP151-201ENST00000410230 316 ntBASIC5.63□□□□□ -1.51
SUMO3P55854 RN7SKP108-201ENST00000411367 328 ntBASIC5.63□□□□□ -1.51
SUMO3P55854 AC092745.2-202ENST00000411880 369 ntBASIC5.63□□□□□ -1.51
SUMO3P55854 SLC8A1-AS1-202ENST00000417875 344 ntTSL 2 BASIC5.63□□□□□ -1.51
SUMO3P55854 RPS3AP37-201ENST00000419176 745 ntBASIC5.63□□□□□ -1.51
SUMO3P55854 AC007562.1-201ENST00000421819 517 ntBASIC5.63□□□□□ -1.51
SUMO3P55854 AL513175.2-201ENST00000422071 443 ntBASIC5.63□□□□□ -1.51
SUMO3P55854 LINC00502-201ENST00000423621 445 ntTSL 3 BASIC5.63□□□□□ -1.51
SUMO3P55854 TAB2-AS1-201ENST00000424421 730 ntTSL 5 BASIC5.63□□□□□ -1.51
SUMO3P55854 AC090505.2-201ENST00000427064 464 ntTSL 3 BASIC5.63□□□□□ -1.51
SUMO3P55854 AC137630.2-202ENST00000429681 555 ntTSL 3 BASIC5.63□□□□□ -1.51
SUMO3P55854 LCE6A-201ENST00000431011 628 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
SUMO3P55854 AL589935.1-218ENST00000434683 529 ntTSL 3 BASIC5.63□□□□□ -1.51
SUMO3P55854 NANOGP9-201ENST00000439890 892 ntBASIC5.63□□□□□ -1.51
SUMO3P55854 AC073052.1-201ENST00000440417 714 ntBASIC5.63□□□□□ -1.51
SUMO3P55854 MTCYBP42-201ENST00000444653 1130 ntBASIC5.63□□□□□ -1.51
SUMO3P55854 HCG14-201ENST00000444986 413 ntTSL 2 BASIC5.63□□□□□ -1.51
SUMO3P55854 AC023274.2-201ENST00000445264 521 ntBASIC5.63□□□□□ -1.51
SUMO3P55854 AL590004.3-202ENST00000445883 451 ntBASIC5.63□□□□□ -1.51
SUMO3P55854 AC012355.1-201ENST00000450290 769 ntTSL 3 BASIC5.63□□□□□ -1.51
SUMO3P55854 RPS27AP2-201ENST00000457576 465 ntBASIC5.63□□□□□ -1.51
SUMO3P55854 AC096992.1-201ENST00000459808 709 ntBASIC5.63□□□□□ -1.51
SUMO3P55854 AL355032.1-201ENST00000472981 438 ntBASIC5.63□□□□□ -1.51
SUMO3P55854 LINC00903-201ENST00000497854 223 ntTSL 3 BASIC5.63□□□□□ -1.51
SUMO3P55854 AC093890.1-201ENST00000502554 540 ntBASIC5.63□□□□□ -1.51
SUMO3P55854 AC008957.1-202ENST00000512329 681 ntTSL 3 BASIC5.63□□□□□ -1.51
SUMO3P55854 CYP4F27P-201ENST00000514557 494 ntBASIC5.63□□□□□ -1.51
SUMO3P55854 Y_RNA.710-201ENST00000516975 110 ntBASIC5.63□□□□□ -1.51
SUMO3P55854 DUXAP5-201ENST00000529668 529 ntBASIC5.63□□□□□ -1.51
SUMO3P55854 AC023538.1-201ENST00000534576 736 ntBASIC5.63□□□□□ -1.51
SUMO3P55854 AC023796.1-201ENST00000536131 670 ntTSL 3 BASIC5.63□□□□□ -1.51
SUMO3P55854 LINC01489-201ENST00000542689 605 ntTSL 5 BASIC5.63□□□□□ -1.51
SUMO3P55854 AC244502.3-201ENST00000555460 457 ntTSL 3 BASIC5.63□□□□□ -1.51
SUMO3P55854 AC090971.2-201ENST00000558142 510 ntTSL 3 BASIC5.63□□□□□ -1.51
SUMO3P55854 AC012050.1-201ENST00000558185 472 ntTSL 3 BASIC5.63□□□□□ -1.51
SUMO3P55854 AC138907.2-201ENST00000561479 866 ntTSL 3 BASIC5.63□□□□□ -1.51
SUMO3P55854 LINC02170-201ENST00000561519 555 ntTSL 4 BASIC5.63□□□□□ -1.51
SUMO3P55854 AC145350.4-201ENST00000562827 866 ntTSL 3 BASIC5.63□□□□□ -1.51
SUMO3P55854 AC133485.5-201ENST00000563407 866 ntTSL 3 BASIC5.63□□□□□ -1.51
SUMO3P55854 AC090125.1-201ENST00000581541 493 ntTSL 3 BASIC5.63□□□□□ -1.51
SUMO3P55854 LINC01908-201ENST00000583148 555 ntTSL 4 BASIC5.63□□□□□ -1.51
SUMO3P55854 AP005136.2-201ENST00000583253 1049 ntBASIC5.63□□□□□ -1.51
SUMO3P55854 AC005544.1-201ENST00000584277 460 ntTSL 3 BASIC5.63□□□□□ -1.51
SUMO3P55854 ZNF92P3-201ENST00000596594 954 ntBASIC5.63□□□□□ -1.51
SUMO3P55854 NIFKP6-201ENST00000598115 845 ntBASIC5.63□□□□□ -1.51
SUMO3P55854 SMIM12P1-201ENST00000603004 274 ntBASIC5.63□□□□□ -1.51
SUMO3P55854 AC008555.7-201ENST00000605008 583 ntBASIC5.63□□□□□ -1.51
SUMO3P55854 AC083798.2-201ENST00000608756 1152 ntTSL 4 BASIC5.63□□□□□ -1.51
SUMO3P55854 AL355493.4-201ENST00000618530 292 ntBASIC5.63□□□□□ -1.51
SUMO3P55854 AL121895.2-201ENST00000619558 447 ntBASIC5.63□□□□□ -1.51
SUMO3P55854 AL137067.2-201ENST00000621202 131 ntBASIC5.63□□□□□ -1.51
SUMO3P55854 SATB1-AS1-263ENST00000630022 622 ntTSL 5 BASIC5.63□□□□□ -1.51
SUMO3P55854 FRG1EP-201ENST00000634469 770 ntBASIC5.63□□□□□ -1.51
SUMO3P55854 AC017104.5-201ENST00000637647 639 ntBASIC5.63□□□□□ -1.51
SUMO3P55854 AC141930.3-201ENST00000640435 762 ntTSL 5 BASIC5.63□□□□□ -1.51
SUMO3P55854 5S_rRNA.29-201ENST00000641250 107 ntBASIC5.63□□□□□ -1.51
SUMO3P55854 OR7A1P-202ENST00000641542 1158 ntBASIC5.63□□□□□ -1.51
SUMO3P55854 DYNC1I2-202ENST00000397119 2604 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
SUMO3P55854 TAF12-202ENST00000373824 1334 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
SUMO3P55854 PIP5K1B-201ENST00000265382 2654 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
SUMO3P55854 NOS1-201ENST00000317775 12158 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
SUMO3P55854 PCGF5-204ENST00000543648 7144 ntAPPRIS P1 TSL 2 BASIC5.63□□□□□ -1.51
SUMO3P55854 CYLD-201ENST00000311559 5371 ntTSL 5 BASIC5.63□□□□□ -1.51
SUMO3P55854 PSMC6-219ENST00000612399 1590 ntAPPRIS P2 TSL 1 (best) BASIC5.63□□□□□ -1.51
SUMO3P55854 AL133243.2-201ENST00000610331 1621 ntBASIC5.63□□□□□ -1.51
SUMO3P55854 TEX9-203ENST00000558083 4440 ntTSL 2 BASIC5.62□□□□□ -1.51
SUMO3P55854 OPALIN-201ENST00000371172 3557 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
SUMO3P55854 CALN1-203ENST00000395276 9189 ntAPPRIS P3 TSL 1 (best) BASIC5.62□□□□□ -1.51
SUMO3P55854 CCDC129-211ENST00000615280 4142 ntAPPRIS ALT2 TSL 2 BASIC5.62□□□□□ -1.51
SUMO3P55854 PLCZ1-201ENST00000266505 2148 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
SUMO3P55854 FRS2-209ENST00000550389 6600 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
SUMO3P55854 MATR3-230ENST00000394800 5513 ntTSL 5 BASIC5.62□□□□□ -1.51
SUMO3P55854 AC091045.1-201ENST00000561460 2277 ntTSL 5 BASIC5.62□□□□□ -1.51
SUMO3P55854 AL391704.1-201ENST00000422206 2368 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
SUMO3P55854 RERGL-201ENST00000229002 1147 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
SUMO3P55854 TMSB4XP2-201ENST00000335179 210 ntBASIC5.62□□□□□ -1.51
SUMO3P55854 RNU6-353P-201ENST00000364266 108 ntBASIC5.62□□□□□ -1.51
SUMO3P55854 ZCCHC6-202ENST00000375947 611 ntTSL 5 BASIC5.62□□□□□ -1.51
SUMO3P55854 S100G-201ENST00000380200 455 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
SUMO3P55854 RNU6-98P-201ENST00000384173 107 ntBASIC5.62□□□□□ -1.51
SUMO3P55854 AL360271.1-201ENST00000395679 510 ntBASIC5.62□□□□□ -1.51
SUMO3P55854 RNA5SP156-201ENST00000410250 110 ntBASIC5.62□□□□□ -1.51
SUMO3P55854 RN7SKP86-201ENST00000410454 332 ntBASIC5.62□□□□□ -1.51
SUMO3P55854 GTF2IP2-201ENST00000424290 697 ntBASIC5.62□□□□□ -1.51
SUMO3P55854 AL139158.1-201ENST00000424719 340 ntBASIC5.62□□□□□ -1.51
SUMO3P55854 AC130360.1-201ENST00000425489 1117 ntBASIC5.62□□□□□ -1.51
SUMO3P55854 AC016027.5-201ENST00000427227 210 ntBASIC5.62□□□□□ -1.51
SUMO3P55854 MIR4435-2HG-206ENST00000432818 572 ntTSL 5 BASIC5.62□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 70.3 ms