Protein–RNA interactions for Protein: P54727

RAD23B, UV excision repair protein RAD23 homolog B, humanhuman

Predictions only

Length 409 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAD23BP54727 GPR18-201ENST00000340807 1698 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
RAD23BP54727 NAV2-AS5-201ENST00000528726 3307 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
RAD23BP54727 ARFGEF2-201ENST00000371917 8852 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
RAD23BP54727 NHSL2-204ENST00000631375 12593 ntTSL 5 BASIC5.87□□□□□ -1.47
RAD23BP54727 AC010266.2-201ENST00000564741 3255 ntBASIC5.87□□□□□ -1.47
RAD23BP54727 OR2J3-202ENST00000641151 3297 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
RAD23BP54727 RNA5SP234-201ENST00000363916 119 ntBASIC5.87□□□□□ -1.47
RAD23BP54727 RNU6-819P-201ENST00000364116 107 ntBASIC5.87□□□□□ -1.47
RAD23BP54727 RN7SKP124-201ENST00000364730 341 ntBASIC5.87□□□□□ -1.47
RAD23BP54727 RNU4-2-201ENST00000365668 141 ntBASIC5.87□□□□□ -1.47
RAD23BP54727 C1orf194-204ENST00000369949 731 ntTSL 2 BASIC5.87□□□□□ -1.47
RAD23BP54727 SNORA16A-201ENST00000384342 137 ntBASIC5.87□□□□□ -1.47
RAD23BP54727 AC005323.2-201ENST00000399342 583 ntTSL 3 BASIC5.87□□□□□ -1.47
RAD23BP54727 AL512422.1-201ENST00000407033 553 ntBASIC5.87□□□□□ -1.47
RAD23BP54727 G6PC2-203ENST00000421979 494 ntTSL 3 BASIC5.87□□□□□ -1.47
RAD23BP54727 SETP10-201ENST00000424368 814 ntBASIC5.87□□□□□ -1.47
RAD23BP54727 HMGN2P27-201ENST00000427352 270 ntBASIC5.87□□□□□ -1.47
RAD23BP54727 ZNF736P1Y-201ENST00000440402 1276 ntBASIC5.87□□□□□ -1.47
RAD23BP54727 AL391987.1-201ENST00000441025 200 ntBASIC5.87□□□□□ -1.47
RAD23BP54727 PCBP1-AS1-232ENST00000442040 1111 ntTSL 3 BASIC5.87□□□□□ -1.47
RAD23BP54727 AC016724.1-201ENST00000453215 421 ntBASIC5.87□□□□□ -1.47
RAD23BP54727 RANP1-206ENST00000455094 651 ntBASIC5.87□□□□□ -1.47
RAD23BP54727 RNU7-157P-201ENST00000459600 66 ntBASIC5.87□□□□□ -1.47
RAD23BP54727 RN7SL197P-201ENST00000466981 299 ntBASIC5.87□□□□□ -1.47
RAD23BP54727 RPSAP39-201ENST00000467439 883 ntBASIC5.87□□□□□ -1.47
RAD23BP54727 TTC26-205ENST00000474035 1193 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
RAD23BP54727 NECTIN3-AS1-205ENST00000491709 792 ntTSL 3 BASIC5.87□□□□□ -1.47
RAD23BP54727 RN7SL466P-201ENST00000497546 295 ntBASIC5.87□□□□□ -1.47
RAD23BP54727 POLR2K-203ENST00000522439 543 ntTSL 2 BASIC5.87□□□□□ -1.47
RAD23BP54727 AC090993.1-201ENST00000522460 582 ntTSL 3 BASIC5.87□□□□□ -1.47
RAD23BP54727 AC138832.1-201ENST00000522871 556 ntBASIC5.87□□□□□ -1.47
RAD23BP54727 EIF4A2P3-201ENST00000525903 1055 ntBASIC5.87□□□□□ -1.47
RAD23BP54727 RGS5-208ENST00000530507 851 ntAPPRIS ALT1 TSL 3 BASIC5.87□□□□□ -1.47
RAD23BP54727 TRDV3-201ENST00000535880 425 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
RAD23BP54727 NELL2-211ENST00000548826 559 ntTSL 2 BASIC5.87□□□□□ -1.47
RAD23BP54727 HMGN2P47-201ENST00000559378 272 ntBASIC5.87□□□□□ -1.47
RAD23BP54727 AL731537.2-201ENST00000561565 951 ntBASIC5.87□□□□□ -1.47
RAD23BP54727 AC015720.2-201ENST00000567709 334 ntBASIC5.87□□□□□ -1.47
RAD23BP54727 AC106729.1-201ENST00000567777 466 ntTSL 3 BASIC5.87□□□□□ -1.47
RAD23BP54727 AC022916.2-201ENST00000590144 559 ntTSL 4 BASIC5.87□□□□□ -1.47
RAD23BP54727 SMIM24-204ENST00000591708 660 ntAPPRIS ALT2 TSL 2 BASIC5.87□□□□□ -1.47
RAD23BP54727 CDC42EP3P1-201ENST00000601004 764 ntBASIC5.87□□□□□ -1.47
RAD23BP54727 AL356580.1-201ENST00000604129 159 ntTSL 5 BASIC5.87□□□□□ -1.47
RAD23BP54727 TULP3P1-203ENST00000606237 586 ntTSL 4 BASIC5.87□□□□□ -1.47
RAD23BP54727 AL160400.1-201ENST00000606385 1030 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
RAD23BP54727 AC092574.1-201ENST00000609771 420 ntBASIC5.87□□□□□ -1.47
RAD23BP54727 AC096586.2-201ENST00000610260 441 ntBASIC5.87□□□□□ -1.47
RAD23BP54727 AL133445.2-201ENST00000611191 527 ntBASIC5.87□□□□□ -1.47
RAD23BP54727 AC004477.3-201ENST00000614061 590 ntBASIC5.87□□□□□ -1.47
RAD23BP54727 SATB1-AS1-243ENST00000627546 589 ntTSL 5 BASIC5.87□□□□□ -1.47
RAD23BP54727 AC004808.2-201ENST00000627965 773 ntBASIC5.87□□□□□ -1.47
RAD23BP54727 AJ009632.2-203ENST00000634708 1205 ntTSL 5 BASIC5.87□□□□□ -1.47
RAD23BP54727 TRIM51-201ENST00000244891 1329 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
RAD23BP54727 PRLR-203ENST00000348262 1339 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
RAD23BP54727 SYNCRIP-204ENST00000616122 6764 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
RAD23BP54727 DLGAP1-AS2-202ENST00000573177 1388 ntBASIC5.87□□□□□ -1.47
RAD23BP54727 ALCAM-205ENST00000472644 4189 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
RAD23BP54727 ZNF518B-201ENST00000326756 6894 ntAPPRIS P1 TSL 3 BASIC5.87□□□□□ -1.47
RAD23BP54727 DDX58-201ENST00000379868 4089 ntTSL 5 BASIC5.87□□□□□ -1.47
RAD23BP54727 LRP1B-201ENST00000389484 16535 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
RAD23BP54727 OTUD4-202ENST00000454497 7069 ntTSL 2 BASIC5.86□□□□□ -1.47
RAD23BP54727 SLC4A10-202ENST00000375514 5710 ntAPPRIS ALT1 TSL 2 BASIC5.86□□□□□ -1.47
RAD23BP54727 SLCO1C1-209ENST00000545604 2557 ntTSL 2 BASIC5.86□□□□□ -1.47
RAD23BP54727 PSG1-202ENST00000312439 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC5.86□□□□□ -1.47
RAD23BP54727 SAMSN1-203ENST00000400566 1888 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
RAD23BP54727 ZNF493-203ENST00000392288 5023 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
RAD23BP54727 ARHGAP5-206ENST00000539826 4881 ntAPPRIS P3 TSL 1 (best) BASIC5.86□□□□□ -1.47
RAD23BP54727 AC012361.1-201ENST00000447260 1498 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
RAD23BP54727 ZNF492-201ENST00000456783 4245 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
RAD23BP54727 ZNF440-201ENST00000304060 4189 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
RAD23BP54727 LINC02047-201ENST00000494761 1371 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
RAD23BP54727 TCP11X1-202ENST00000622971 1372 ntBASIC5.86□□□□□ -1.47
RAD23BP54727 OR51Q1-201ENST00000300778 1096 ntAPPRIS P1 BASIC5.86□□□□□ -1.47
RAD23BP54727 Y_RNA.62-201ENST00000362840 99 ntBASIC5.86□□□□□ -1.47
RAD23BP54727 HEATR1-201ENST00000366579 793 ntTSL 2 BASIC5.86□□□□□ -1.47
RAD23BP54727 SSX1-201ENST00000376919 1298 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
RAD23BP54727 BCL11A-205ENST00000409351 756 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
RAD23BP54727 MIRLET7DHG-201ENST00000416309 1294 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
RAD23BP54727 CHEK2P5-201ENST00000423877 246 ntBASIC5.86□□□□□ -1.47
RAD23BP54727 AC004994.1-201ENST00000447057 313 ntTSL 3 BASIC5.86□□□□□ -1.47
RAD23BP54727 IGBP1P3-201ENST00000447449 1000 ntBASIC5.86□□□□□ -1.47
RAD23BP54727 EIF4A1P6-201ENST00000448133 1210 ntBASIC5.86□□□□□ -1.47
RAD23BP54727 AC099344.3-201ENST00000454489 626 ntTSL 3 BASIC5.86□□□□□ -1.47
RAD23BP54727 RPL35AP19-201ENST00000469425 329 ntBASIC5.86□□□□□ -1.47
RAD23BP54727 RN7SL188P-201ENST00000469842 285 ntBASIC5.86□□□□□ -1.47
RAD23BP54727 RN7SL101P-201ENST00000496350 279 ntBASIC5.86□□□□□ -1.47
RAD23BP54727 ATG10-AS1-201ENST00000504846 648 ntBASIC5.86□□□□□ -1.47
RAD23BP54727 SEMA6A-AS1-202ENST00000508424 862 ntTSL 3 BASIC5.86□□□□□ -1.47
RAD23BP54727 AC021106.1-201ENST00000509020 1058 ntBASIC5.86□□□□□ -1.47
RAD23BP54727 AC097515.1-201ENST00000512370 435 ntTSL 2 BASIC5.86□□□□□ -1.47
RAD23BP54727 HGNC:24955-208ENST00000521585 1260 ntTSL 4 BASIC5.86□□□□□ -1.47
RAD23BP54727 MTERF3-205ENST00000524341 776 ntTSL 3 BASIC5.86□□□□□ -1.47
RAD23BP54727 ANKRD49-206ENST00000540349 573 ntTSL 4 BASIC5.86□□□□□ -1.47
RAD23BP54727 LINC00933-205ENST00000560917 449 ntTSL 3 BASIC5.86□□□□□ -1.47
RAD23BP54727 AC087190.2-201ENST00000565648 731 ntTSL 3 BASIC5.86□□□□□ -1.47
RAD23BP54727 AC012146.2-201ENST00000576545 416 ntBASIC5.86□□□□□ -1.47
RAD23BP54727 AC103808.4-201ENST00000577258 391 ntTSL 3 BASIC5.86□□□□□ -1.47
RAD23BP54727 AC087301.1-201ENST00000579037 321 ntTSL 3 BASIC5.86□□□□□ -1.47
RAD23BP54727 AP005403.1-201ENST00000579720 229 ntBASIC5.86□□□□□ -1.47
RAD23BP54727 AC022031.2-203ENST00000587346 565 ntTSL 4 BASIC5.86□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 86.1 ms