Protein–RNA interactions for Protein: P51531

SMARCA2, Probable global transcription activator SNF2L2, humanhuman

Predictions only

Length 1,590 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA2P51531 THRB-202ENST00000356447 6345 ntAPPRIS P2 TSL 1 (best) BASIC9.24□□□□□ -0.93
SMARCA2P51531 NRG3-202ENST00000372142 3136 ntAPPRIS ALT2 TSL 1 (best) BASIC9.23□□□□□ -0.93
SMARCA2P51531 ASAH2-202ENST00000395526 6880 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
SMARCA2P51531 AL161756.1-201ENST00000555861 1751 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
SMARCA2P51531 GRIK2-205ENST00000369138 4921 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
SMARCA2P51531 UGT2B24P-201ENST00000514441 1597 ntBASIC9.23□□□□□ -0.93
SMARCA2P51531 ATP2B4-204ENST00000367218 8918 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
SMARCA2P51531 SENP1-201ENST00000448372 4679 ntAPPRIS P2 TSL 1 (best) BASIC9.23□□□□□ -0.93
SMARCA2P51531 LINC01776-201ENST00000418344 2229 ntTSL 2 BASIC9.23□□□□□ -0.93
SMARCA2P51531 EIF3E-206ENST00000519030 1324 ntTSL 5 BASIC9.23□□□□□ -0.93
SMARCA2P51531 ESRRG-224ENST00000616180 5194 ntAPPRIS P1 TSL 5 BASIC9.23□□□□□ -0.93
SMARCA2P51531 HIVEP2-202ENST00000367603 9724 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
SMARCA2P51531 IQCB2P-201ENST00000401788 1633 ntBASIC9.23□□□□□ -0.93
SMARCA2P51531 FCER1G-201ENST00000289902 591 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
SMARCA2P51531 RNU1-74P-201ENST00000384108 171 ntBASIC9.23□□□□□ -0.93
SMARCA2P51531 IL6-206ENST00000407492 926 ntTSL 3 BASIC9.23□□□□□ -0.93
SMARCA2P51531 AL033380.1-201ENST00000442781 421 ntTSL 2 BASIC9.23□□□□□ -0.93
SMARCA2P51531 AP003774.2-202ENST00000449694 341 ntTSL 3 BASIC9.23□□□□□ -0.93
SMARCA2P51531 NSMCE2-206ENST00000519010 848 ntTSL 2 BASIC9.23□□□□□ -0.93
SMARCA2P51531 AC090809.1-201ENST00000524132 570 ntTSL 4 BASIC9.23□□□□□ -0.93
SMARCA2P51531 AP005436.1-201ENST00000531454 488 ntTSL 2 BASIC9.23□□□□□ -0.93
SMARCA2P51531 AC009643.1-201ENST00000532030 391 ntBASIC9.23□□□□□ -0.93
SMARCA2P51531 AP002370.2-203ENST00000533101 576 ntTSL 4 BASIC9.23□□□□□ -0.93
SMARCA2P51531 AC098935.2-201ENST00000604222 466 ntBASIC9.23□□□□□ -0.93
SMARCA2P51531 MCM9-209ENST00000619706 4822 ntAPPRIS P1 TSL 5 BASIC9.23□□□□□ -0.93
SMARCA2P51531 CDYL2-207ENST00000570137 8159 ntAPPRIS P2 TSL 1 (best) BASIC9.23□□□□□ -0.93
SMARCA2P51531 LCOR-201ENST00000286067 4542 ntBASIC9.23□□□□□ -0.93
SMARCA2P51531 TBC1D23-201ENST00000344949 3656 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
SMARCA2P51531 USP26-203ENST00000511190 3665 ntAPPRIS P1 TSL 2 BASIC9.23□□□□□ -0.93
SMARCA2P51531 Z98755.1-201ENST00000407015 1384 ntBASIC9.23□□□□□ -0.93
SMARCA2P51531 CASP1-208ENST00000527979 1521 ntTSL 5 BASIC9.22□□□□□ -0.93
SMARCA2P51531 DCP2-201ENST00000389063 8947 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
SMARCA2P51531 AC048341.2-201ENST00000550290 8693 ntTSL 4 BASIC9.22□□□□□ -0.93
SMARCA2P51531 MOCS2-203ENST00000450852 1337 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
SMARCA2P51531 SCN8A-201ENST00000354534 11556 ntAPPRIS P3 TSL 1 (best) BASIC9.22□□□□□ -0.93
SMARCA2P51531 LINC01317-201ENST00000366209 779 ntTSL 5 BASIC9.22□□□□□ -0.93
SMARCA2P51531 ARSD-AS1-201ENST00000414053 816 ntTSL 2 BASIC9.22□□□□□ -0.93
SMARCA2P51531 BX510359.2-201ENST00000417920 305 ntBASIC9.22□□□□□ -0.93
SMARCA2P51531 AC006037.1-201ENST00000437967 287 ntTSL 5 BASIC9.22□□□□□ -0.93
SMARCA2P51531 TRIM60P9Y-201ENST00000438459 816 ntBASIC9.22□□□□□ -0.93
SMARCA2P51531 LINC00380-201ENST00000442478 353 ntTSL 2 BASIC9.22□□□□□ -0.93
SMARCA2P51531 TRIM60P11Y-201ENST00000445313 801 ntBASIC9.22□□□□□ -0.93
SMARCA2P51531 AP000470.1-201ENST00000448063 693 ntTSL 5 BASIC9.22□□□□□ -0.93
SMARCA2P51531 EIF4E-204ENST00000504432 1132 ntTSL 5 BASIC9.22□□□□□ -0.93
SMARCA2P51531 GLUD1P3-202ENST00000508551 200 ntBASIC9.22□□□□□ -0.93
SMARCA2P51531 LINC00589-202ENST00000518623 938 ntTSL 4 BASIC9.22□□□□□ -0.93
SMARCA2P51531 AC083923.2-201ENST00000519880 574 ntTSL 4 BASIC9.22□□□□□ -0.93
SMARCA2P51531 AC091163.1-201ENST00000524012 605 ntTSL 4 BASIC9.22□□□□□ -0.93
SMARCA2P51531 NMNAT1P1-201ENST00000554095 876 ntBASIC9.22□□□□□ -0.93
SMARCA2P51531 AC099518.4-204ENST00000567047 380 ntTSL 2 BASIC9.22□□□□□ -0.93
SMARCA2P51531 BNIP3P33-201ENST00000598912 569 ntBASIC9.22□□□□□ -0.93
SMARCA2P51531 AC005377.1-201ENST00000605126 456 ntBASIC9.22□□□□□ -0.93
SMARCA2P51531 Metazoa_SRP.181-201ENST00000616636 288 ntBASIC9.22□□□□□ -0.93
SMARCA2P51531 AC006338.2-201ENST00000616864 791 ntBASIC9.22□□□□□ -0.93
SMARCA2P51531 LINC00624-202ENST00000621316 3372 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
SMARCA2P51531 AL359757.1-201ENST00000623176 255 ntBASIC9.22□□□□□ -0.93
SMARCA2P51531 HYDIN2-203ENST00000614586 13885 ntBASIC9.22□□□□□ -0.93
SMARCA2P51531 AC144833.1-201ENST00000567953 4089 ntBASIC9.22□□□□□ -0.93
SMARCA2P51531 AL359715.3-201ENST00000569267 2123 ntBASIC9.22□□□□□ -0.93
SMARCA2P51531 PLCH1-203ENST00000447496 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC9.22□□□□□ -0.93
SMARCA2P51531 ZNF253-203ENST00000589717 3519 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
SMARCA2P51531 LARP4-203ENST00000398473 6427 ntAPPRIS P3 TSL 1 (best) BASIC9.22□□□□□ -0.93
SMARCA2P51531 ZNF420-202ENST00000337995 3535 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.93
SMARCA2P51531 OR2J1-202ENST00000641659 2144 ntAPPRIS P1 BASIC9.21□□□□□ -0.93
SMARCA2P51531 NACA-203ENST00000454682 6629 ntTSL 5 BASIC9.21□□□□□ -0.93
SMARCA2P51531 NSUN6-201ENST00000377304 2201 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.93
SMARCA2P51531 OR11H6-201ENST00000315519 993 ntAPPRIS P1 BASIC9.21□□□□□ -0.93
SMARCA2P51531 C1orf54-201ENST00000369098 418 ntTSL 1 (best) BASIC9.21□□□□□ -0.93
SMARCA2P51531 LINC02337-201ENST00000401043 374 ntTSL 3 BASIC9.21□□□□□ -0.93
SMARCA2P51531 C6orf52-203ENST00000426700 493 ntAPPRIS P2 TSL 2 BASIC9.21□□□□□ -0.93
SMARCA2P51531 DOCK9-AS1-201ENST00000439367 392 ntTSL 3 BASIC9.21□□□□□ -0.93
SMARCA2P51531 REG1CP-206ENST00000447469 496 ntBASIC9.21□□□□□ -0.93
SMARCA2P51531 GAPDHP62-201ENST00000515313 990 ntBASIC9.21□□□□□ -0.93
SMARCA2P51531 AC087783.1-201ENST00000527135 564 ntTSL 4 BASIC9.21□□□□□ -0.93
SMARCA2P51531 CCDC58P3-201ENST00000590792 430 ntBASIC9.21□□□□□ -0.93
SMARCA2P51531 SETSIP-202ENST00000596516 909 ntAPPRIS P2 BASIC9.21□□□□□ -0.93
SMARCA2P51531 NEK3-211ENST00000629912 141 ntTSL 5 BASIC9.21□□□□□ -0.93
SMARCA2P51531 SLC9A6-212ENST00000637195 4858 ntTSL 5 BASIC9.21□□□□□ -0.93
SMARCA2P51531 RASGRP1-209ENST00000559830 1910 ntTSL 1 (best) BASIC9.21□□□□□ -0.93
SMARCA2P51531 POLA1-201ENST00000379059 5440 ntAPPRIS P3 TSL 1 (best) BASIC9.21□□□□□ -0.94
SMARCA2P51531 POLA1-206ENST00000611764 5434 ntAPPRIS ALT2 TSL 5 BASIC9.21□□□□□ -0.94
SMARCA2P51531 ASTE1-208ENST00000514044 2504 ntTSL 1 (best) BASIC9.21□□□□□ -0.94
SMARCA2P51531 LINC01450-201ENST00000443406 3263 ntTSL 1 (best) BASIC9.21□□□□□ -0.94
SMARCA2P51531 PHTF2-207ENST00000424760 1977 ntTSL 2 BASIC9.21□□□□□ -0.94
SMARCA2P51531 AL121594.3-201ENST00000557565 3857 ntAPPRIS P1 TSL 2 BASIC9.21□□□□□ -0.94
SMARCA2P51531 AC068733.2-201ENST00000605434 1418 ntBASIC9.21□□□□□ -0.94
SMARCA2P51531 KCNN3-205ENST00000618040 13057 ntTSL 5 BASIC9.21□□□□□ -0.94
SMARCA2P51531 FAM170B-AS1-203ENST00000442525 2000 ntTSL 2 BASIC9.21□□□□□ -0.94
SMARCA2P51531 MYPN-202ENST00000358913 6013 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
SMARCA2P51531 MAX-203ENST00000341653 330 ntTSL 2 BASIC9.2□□□□□ -0.94
SMARCA2P51531 RNA5SP191-201ENST00000362585 102 ntBASIC9.2□□□□□ -0.94
SMARCA2P51531 LINC00364-201ENST00000415120 611 ntTSL 3 BASIC9.2□□□□□ -0.94
SMARCA2P51531 AC122718.1-201ENST00000439448 744 ntBASIC9.2□□□□□ -0.94
SMARCA2P51531 MID1-209ENST00000453318 6393 ntAPPRIS P1 TSL 5 BASIC9.2□□□□□ -0.94
SMARCA2P51531 FAM133DP-201ENST00000464802 691 ntBASIC9.2□□□□□ -0.94
SMARCA2P51531 LINC02438-201ENST00000505347 641 ntTSL 3 BASIC9.2□□□□□ -0.94
SMARCA2P51531 LINC02306-201ENST00000546412 529 ntTSL 3 BASIC9.2□□□□□ -0.94
SMARCA2P51531 AC087500.2-201ENST00000575056 498 ntTSL 5 BASIC9.2□□□□□ -0.94
SMARCA2P51531 HID1-AS1-201ENST00000577295 815 ntTSL 2 BASIC9.2□□□□□ -0.94
SMARCA2P51531 TTN-AS1-232ENST00000589487 1077 ntTSL 5 BASIC9.2□□□□□ -0.94
Retrieved 100 of 98,524 protein–RNA pairs in 100.7 ms