Protein–RNA interactions for Protein: P49238

CX3CR1, CX3C chemokine receptor 1, humanhuman

Predictions only

Length 355 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CR1P49238 LINC00701-201ENST00000418295 742 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
CX3CR1P49238 RPL12P43-201ENST00000420608 499 ntBASIC4.77□□□□□ -1.65
CX3CR1P49238 RPS3P2-201ENST00000421346 701 ntBASIC4.77□□□□□ -1.65
CX3CR1P49238 Z99289.1-206ENST00000425503 393 ntTSL 3 BASIC4.77□□□□□ -1.65
CX3CR1P49238 AL662874.1-201ENST00000426065 230 ntBASIC4.77□□□□□ -1.65
CX3CR1P49238 BX119321.1-201ENST00000428912 797 ntBASIC4.77□□□□□ -1.65
CX3CR1P49238 RAB9AP5-201ENST00000437794 597 ntBASIC4.77□□□□□ -1.65
CX3CR1P49238 RAB9AP2-201ENST00000443911 597 ntBASIC4.77□□□□□ -1.65
CX3CR1P49238 HMGN1P2-201ENST00000445197 310 ntBASIC4.77□□□□□ -1.65
CX3CR1P49238 EEF1B2P6-201ENST00000445713 673 ntBASIC4.77□□□□□ -1.65
CX3CR1P49238 RBMY2TP-201ENST00000451162 947 ntBASIC4.77□□□□□ -1.65
CX3CR1P49238 AC068489.1-201ENST00000453706 261 ntTSL 5 BASIC4.77□□□□□ -1.65
CX3CR1P49238 LINC01436-201ENST00000457157 1048 ntTSL 2 BASIC4.77□□□□□ -1.65
CX3CR1P49238 RPL5P16-201ENST00000471467 790 ntBASIC4.77□□□□□ -1.65
CX3CR1P49238 SELENOT-204ENST00000480740 783 ntTSL 3 BASIC4.77□□□□□ -1.65
CX3CR1P49238 LINC00483-204ENST00000502517 940 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
CX3CR1P49238 AC098859.2-201ENST00000506232 563 ntTSL 4 BASIC4.77□□□□□ -1.65
CX3CR1P49238 AC109464.1-201ENST00000511091 819 ntBASIC4.77□□□□□ -1.65
CX3CR1P49238 GYPB-213ENST00000513128 360 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
CX3CR1P49238 HMGN1P9-201ENST00000515212 298 ntBASIC4.77□□□□□ -1.65
CX3CR1P49238 RAD21-204ENST00000518055 896 ntTSL 2 BASIC4.77□□□□□ -1.65
CX3CR1P49238 WDYHV1-203ENST00000518125 880 ntTSL 2 BASIC4.77□□□□□ -1.65
CX3CR1P49238 AC020937.1-201ENST00000519677 1013 ntBASIC4.77□□□□□ -1.65
CX3CR1P49238 IGKV2-4-201ENST00000523070 340 ntBASIC4.77□□□□□ -1.65
CX3CR1P49238 AP006259.1-201ENST00000528520 561 ntTSL 2 BASIC4.77□□□□□ -1.65
CX3CR1P49238 AL121839.1-201ENST00000556233 1185 ntBASIC4.77□□□□□ -1.65
CX3CR1P49238 AC007431.2-201ENST00000577189 563 ntTSL 2 BASIC4.77□□□□□ -1.65
CX3CR1P49238 AC012616.1-201ENST00000600294 197 ntBASIC4.77□□□□□ -1.65
CX3CR1P49238 XIST-210ENST00000602863 775 ntTSL 3 BASIC4.77□□□□□ -1.65
CX3CR1P49238 CXADRP3-202ENST00000617265 1100 ntBASIC4.77□□□□□ -1.65
CX3CR1P49238 AC026367.3-201ENST00000619032 590 ntBASIC4.77□□□□□ -1.65
CX3CR1P49238 AC079906.1-201ENST00000621214 815 ntTSL 3 BASIC4.77□□□□□ -1.65
CX3CR1P49238 AC134980.1-203ENST00000640541 570 ntTSL 4 BASIC4.77□□□□□ -1.65
CX3CR1P49238 OR8J3-204ENST00000642058 3806 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
CX3CR1P49238 TTC3-204ENST00000399017 10363 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
CX3CR1P49238 TSPAN6-204ENST00000612152 3796 ntTSL 5 BASIC4.77□□□□□ -1.65
CX3CR1P49238 FOXP2-202ENST00000360232 1412 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
CX3CR1P49238 AFP-201ENST00000226359 1914 ntTSL 5 BASIC4.77□□□□□ -1.65
CX3CR1P49238 CSNK1G3-210ENST00000521364 2580 ntAPPRIS ALT2 TSL 2 BASIC4.77□□□□□ -1.65
CX3CR1P49238 WDPCP-202ENST00000398544 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC4.77□□□□□ -1.65
CX3CR1P49238 FAM19A2-215ENST00000551619 2718 ntAPPRIS P1 TSL 2 BASIC4.77□□□□□ -1.65
CX3CR1P49238 GLRA2-202ENST00000355020 1730 ntAPPRIS ALT1 TSL 1 (best) BASIC4.77□□□□□ -1.65
CX3CR1P49238 ZNF429-209ENST00000618549 1889 ntTSL 5 BASIC4.77□□□□□ -1.65
CX3CR1P49238 POU2F1-202ENST00000367862 14038 ntAPPRIS ALT2 TSL 1 (best) BASIC4.77□□□□□ -1.65
CX3CR1P49238 MAP9-208ENST00000515654 2044 ntTSL 5 BASIC4.77□□□□□ -1.65
CX3CR1P49238 C9orf135-AS1-201ENST00000439418 1375 ntTSL 2 BASIC4.77□□□□□ -1.65
CX3CR1P49238 CFAP47-203ENST00000378653 9943 ntAPPRIS P2 TSL 5 BASIC4.77□□□□□ -1.65
CX3CR1P49238 ZNF117-201ENST00000282869 9080 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
CX3CR1P49238 CPNE4-214ENST00000617767 3556 ntTSL 2 BASIC4.76□□□□□ -1.65
CX3CR1P49238 DLEU7-AS1-201ENST00000413510 1806 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
CX3CR1P49238 PTCD2-202ENST00000380639 11151 ntAPPRIS P1 TSL 5 BASIC4.76□□□□□ -1.65
CX3CR1P49238 AP002512.4-201ENST00000641310 4672 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
CX3CR1P49238 MTERF1-201ENST00000351870 1997 ntAPPRIS P3 TSL 1 (best) BASIC4.76□□□□□ -1.65
CX3CR1P49238 MAP3K2-201ENST00000344908 2135 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
CX3CR1P49238 OR9K1P-202ENST00000641111 3217 ntBASIC4.76□□□□□ -1.65
CX3CR1P49238 WDHD1-201ENST00000360586 5996 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
CX3CR1P49238 RPGRIP1L-212ENST00000621565 6038 ntAPPRIS ALT1 TSL 1 (best) BASIC4.76□□□□□ -1.65
CX3CR1P49238 ANO6-205ENST00000441606 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC4.76□□□□□ -1.65
CX3CR1P49238 TRGV5-201ENST00000390344 552 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
CX3CR1P49238 AC092111.3-201ENST00000402465 496 ntAPPRIS P1 TSL 2 BASIC4.76□□□□□ -1.65
CX3CR1P49238 SNORA79B-201ENST00000410557 148 ntBASIC4.76□□□□□ -1.65
CX3CR1P49238 DSCR4-IT1-201ENST00000417138 424 ntTSL 5 BASIC4.76□□□□□ -1.65
CX3CR1P49238 AL513188.1-201ENST00000421167 614 ntTSL 3 BASIC4.76□□□□□ -1.65
CX3CR1P49238 RPL34P3-201ENST00000421454 338 ntBASIC4.76□□□□□ -1.65
CX3CR1P49238 AL592078.1-201ENST00000421866 321 ntTSL 3 BASIC4.76□□□□□ -1.65
CX3CR1P49238 LINC01731-201ENST00000428035 420 ntTSL 3 BASIC4.76□□□□□ -1.65
CX3CR1P49238 AC017002.1-201ENST00000432268 881 ntTSL 5 BASIC4.76□□□□□ -1.65
CX3CR1P49238 AL354863.1-204ENST00000436430 556 ntTSL 3 BASIC4.76□□□□□ -1.65
CX3CR1P49238 Z84478.1-201ENST00000438230 1219 ntBASIC4.76□□□□□ -1.65
CX3CR1P49238 AL139161.2-201ENST00000438371 740 ntTSL 3 BASIC4.76□□□□□ -1.65
CX3CR1P49238 AL450023.1-201ENST00000450868 751 ntBASIC4.76□□□□□ -1.65
CX3CR1P49238 OR52E3P-201ENST00000452083 936 ntBASIC4.76□□□□□ -1.65
CX3CR1P49238 AP001439.1-201ENST00000455275 392 ntTSL 2 BASIC4.76□□□□□ -1.65
CX3CR1P49238 LINC01448-201ENST00000455947 1171 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
CX3CR1P49238 RPS4XP12-201ENST00000461747 709 ntBASIC4.76□□□□□ -1.65
CX3CR1P49238 LRRC77P-202ENST00000463642 457 ntTSL 4 BASIC4.76□□□□□ -1.65
CX3CR1P49238 SPRR2F-201ENST00000468739 681 ntAPPRIS P1 TSL 3 BASIC4.76□□□□□ -1.65
CX3CR1P49238 VN1R5-201ENST00000472952 1239 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
CX3CR1P49238 AC023424.1-201ENST00000496058 459 ntBASIC4.76□□□□□ -1.65
CX3CR1P49238 PFN1P8-201ENST00000497012 543 ntBASIC4.76□□□□□ -1.65
CX3CR1P49238 LINC02492-201ENST00000502952 564 ntTSL 5 BASIC4.76□□□□□ -1.65
CX3CR1P49238 IGBP1P4-201ENST00000503202 879 ntBASIC4.76□□□□□ -1.65
CX3CR1P49238 AC068672.3-203ENST00000505166 311 ntTSL 3 BASIC4.76□□□□□ -1.65
CX3CR1P49238 MTND6P2-201ENST00000512226 524 ntBASIC4.76□□□□□ -1.65
CX3CR1P49238 SCARNA20.4-201ENST00000516969 131 ntBASIC4.76□□□□□ -1.65
CX3CR1P49238 CDC42P3-201ENST00000518493 633 ntBASIC4.76□□□□□ -1.65
CX3CR1P49238 AC111149.1-201ENST00000522560 343 ntTSL 3 BASIC4.76□□□□□ -1.65
CX3CR1P49238 OR8G3P-201ENST00000533406 921 ntBASIC4.76□□□□□ -1.65
CX3CR1P49238 AP001804.2-201ENST00000533932 910 ntBASIC4.76□□□□□ -1.65
CX3CR1P49238 AC110275.1-201ENST00000534420 623 ntAPPRIS P1 TSL 4 BASIC4.76□□□□□ -1.65
CX3CR1P49238 AC079950.1-201ENST00000551229 568 ntTSL 4 BASIC4.76□□□□□ -1.65
CX3CR1P49238 AL358913.1-201ENST00000554342 121 ntBASIC4.76□□□□□ -1.65
CX3CR1P49238 AL049872.1-201ENST00000556323 322 ntBASIC4.76□□□□□ -1.65
CX3CR1P49238 AC139099.3-202ENST00000574856 439 ntTSL 2 BASIC4.76□□□□□ -1.65
CX3CR1P49238 RN7SL290P-201ENST00000578661 300 ntBASIC4.76□□□□□ -1.65
CX3CR1P49238 AC127024.5-201ENST00000580085 462 ntBASIC4.76□□□□□ -1.65
CX3CR1P49238 AC104996.1-201ENST00000583250 591 ntTSL 5 BASIC4.76□□□□□ -1.65
CX3CR1P49238 ZNF667-AS1-207ENST00000592146 668 ntTSL 5 BASIC4.76□□□□□ -1.65
CX3CR1P49238 AC008395.1-201ENST00000601752 607 ntTSL 5 BASIC4.76□□□□□ -1.65
CX3CR1P49238 AC112211.1-201ENST00000607832 305 ntTSL 3 BASIC4.76□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 72.8 ms