Protein–RNA interactions for Protein: P43699

NKX2-1, Homeobox protein Nkx-2.1, humanhuman

Predicted RBP Predictions only

Length 371 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1P43699 RBMY2HP-201ENST00000457961 720 ntBASIC4.7□□□□□ -1.66
NKX2-1P43699 MIR205HG-209ENST00000458250 406 ntTSL 3 BASIC4.7□□□□□ -1.66
NKX2-1P43699 PSAT1P4-201ENST00000466500 526 ntBASIC4.7□□□□□ -1.66
NKX2-1P43699 RPL12P24-201ENST00000474907 486 ntBASIC4.7□□□□□ -1.66
NKX2-1P43699 AC008410.1-201ENST00000483777 339 ntBASIC4.7□□□□□ -1.66
NKX2-1P43699 GLRX-203ENST00000505427 632 ntAPPRIS P1 TSL 2 BASIC4.7□□□□□ -1.66
NKX2-1P43699 LINC01017-201ENST00000508823 768 ntTSL 3 BASIC4.7□□□□□ -1.66
NKX2-1P43699 LINC02223-202ENST00000511596 578 ntTSL 5 BASIC4.7□□□□□ -1.66
NKX2-1P43699 AC112242.1-201ENST00000515805 406 ntTSL 3 BASIC4.7□□□□□ -1.66
NKX2-1P43699 AC025300.1-201ENST00000526616 384 ntTSL 3 BASIC4.7□□□□□ -1.66
NKX2-1P43699 AC004923.2-201ENST00000529649 369 ntBASIC4.7□□□□□ -1.66
NKX2-1P43699 AC137627.1-201ENST00000545761 289 ntBASIC4.7□□□□□ -1.66
NKX2-1P43699 TWF1-207ENST00000548315 1170 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
NKX2-1P43699 LINC02325-202ENST00000554260 567 ntTSL 4 BASIC4.7□□□□□ -1.66
NKX2-1P43699 TIMM9-203ENST00000555061 598 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
NKX2-1P43699 AC055874.1-201ENST00000561458 479 ntTSL 2 BASIC4.7□□□□□ -1.66
NKX2-1P43699 TXNP4-201ENST00000575018 310 ntBASIC4.7□□□□□ -1.66
NKX2-1P43699 MIR3157-201ENST00000578688 85 ntBASIC4.7□□□□□ -1.66
NKX2-1P43699 Z98949.1-228ENST00000595093 798 ntTSL 5 BASIC4.7□□□□□ -1.66
NKX2-1P43699 AL589740.1-209ENST00000607032 1056 ntTSL 3 BASIC4.7□□□□□ -1.66
NKX2-1P43699 C5orf63-208ENST00000607731 478 ntTSL 5 BASIC4.7□□□□□ -1.66
NKX2-1P43699 AL139124.1-201ENST00000609123 421 ntBASIC4.7□□□□□ -1.66
NKX2-1P43699 MIR6885-201ENST00000612241 66 ntBASIC4.7□□□□□ -1.66
NKX2-1P43699 AC023510.2-201ENST00000622162 746 ntBASIC4.7□□□□□ -1.66
NKX2-1P43699 LINC01620-204ENST00000623295 700 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
NKX2-1P43699 AC021106.3-201ENST00000623925 531 ntBASIC4.7□□□□□ -1.66
NKX2-1P43699 FP236241.1-206ENST00000625005 987 ntTSL 5 BASIC4.7□□□□□ -1.66
NKX2-1P43699 AC073488.3-201ENST00000631611 778 ntBASIC4.7□□□□□ -1.66
NKX2-1P43699 LINC02203-203ENST00000625989 1600 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
NKX2-1P43699 MTERF1-201ENST00000351870 1997 ntAPPRIS P3 TSL 1 (best) BASIC4.7□□□□□ -1.66
NKX2-1P43699 SEM1-202ENST00000356686 2667 ntTSL 5 BASIC4.7□□□□□ -1.66
NKX2-1P43699 MAMDC2-AS1-201ENST00000377178 1504 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
NKX2-1P43699 USP15-201ENST00000280377 4748 ntAPPRIS ALT1 TSL 1 (best) BASIC4.7□□□□□ -1.66
NKX2-1P43699 LIX1-AS1-201ENST00000504578 1793 ntTSL 5 BASIC4.7□□□□□ -1.66
NKX2-1P43699 PDS5B-201ENST00000315596 7497 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
NKX2-1P43699 MTCO1P4-201ENST00000520516 1409 ntBASIC4.7□□□□□ -1.66
NKX2-1P43699 FBXO38-218ENST00000513826 3585 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
NKX2-1P43699 ADGRL2-206ENST00000370721 5023 ntTSL 5 BASIC4.7□□□□□ -1.66
NKX2-1P43699 MID2-202ENST00000443968 2251 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
NKX2-1P43699 AC104964.3-201ENST00000606115 2860 ntBASIC4.7□□□□□ -1.66
NKX2-1P43699 ELMO1-203ENST00000396045 2524 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
NKX2-1P43699 AC117409.1-201ENST00000470499 1310 ntBASIC4.7□□□□□ -1.66
NKX2-1P43699 CDC5L-201ENST00000371477 6423 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
NKX2-1P43699 EPB41L2-226ENST00000530757 4360 ntTSL 2 BASIC4.69□□□□□ -1.66
NKX2-1P43699 SCN11A-202ENST00000444237 5729 ntAPPRIS ALT2 TSL 5 BASIC4.69□□□□□ -1.66
NKX2-1P43699 SLAIN1-204ENST00000358679 2075 ntAPPRIS P3 TSL 2 BASIC4.69□□□□□ -1.66
NKX2-1P43699 WDR12-201ENST00000261015 8100 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
NKX2-1P43699 DYNC2LI1-201ENST00000260605 1399 ntAPPRIS P3 TSL 1 (best) BASIC4.69□□□□□ -1.66
NKX2-1P43699 OAZ3-204ENST00000479764 3789 ntTSL 5 BASIC4.69□□□□□ -1.66
NKX2-1P43699 FAM170B-AS1-203ENST00000442525 2000 ntTSL 2 BASIC4.69□□□□□ -1.66
NKX2-1P43699 GABRG2-203ENST00000414552 3927 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
NKX2-1P43699 SLFN12L-205ENST00000628453 1767 ntAPPRIS ALT2 TSL 5 BASIC4.69□□□□□ -1.66
NKX2-1P43699 AASDH-202ENST00000451613 3182 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
NKX2-1P43699 AC018717.1-201ENST00000457712 1505 ntBASIC4.69□□□□□ -1.66
NKX2-1P43699 HSPA8P19-201ENST00000505359 1517 ntBASIC4.69□□□□□ -1.66
NKX2-1P43699 TAAR1-201ENST00000275216 1020 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
NKX2-1P43699 WFDC11-201ENST00000324384 614 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
NKX2-1P43699 RPL11P4-201ENST00000332269 436 ntBASIC4.69□□□□□ -1.66
NKX2-1P43699 RNA5SP279-201ENST00000365513 117 ntBASIC4.69□□□□□ -1.66
NKX2-1P43699 SPHAR-201ENST00000366688 648 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
NKX2-1P43699 DAOA-202ENST00000375936 742 ntAPPRIS P3 TSL 1 (best) BASIC4.69□□□□□ -1.66
NKX2-1P43699 IFNB1-201ENST00000380232 859 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
NKX2-1P43699 ZRSR2-202ENST00000380308 744 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
NKX2-1P43699 TRAV36DV7-201ENST00000390463 356 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
NKX2-1P43699 HMGB1P10-201ENST00000395823 563 ntBASIC4.69□□□□□ -1.66
NKX2-1P43699 TATDN1P1-201ENST00000414123 891 ntBASIC4.69□□□□□ -1.66
NKX2-1P43699 AL138789.1-201ENST00000425820 960 ntTSL 2 BASIC4.69□□□□□ -1.66
NKX2-1P43699 AC244453.3-201ENST00000426275 459 ntTSL 5 BASIC4.69□□□□□ -1.66
NKX2-1P43699 AL160175.1-201ENST00000428124 247 ntBASIC4.69□□□□□ -1.66
NKX2-1P43699 AC093151.2-201ENST00000429109 394 ntTSL 3 BASIC4.69□□□□□ -1.66
NKX2-1P43699 GABRG3-AS1-201ENST00000439938 970 ntTSL 2 BASIC4.69□□□□□ -1.66
NKX2-1P43699 PA2G4P1-201ENST00000442248 1197 ntBASIC4.69□□□□□ -1.66
NKX2-1P43699 AC245291.3-201ENST00000443400 292 ntBASIC4.69□□□□□ -1.66
NKX2-1P43699 TRIM60P16-201ENST00000444048 694 ntBASIC4.69□□□□□ -1.66
NKX2-1P43699 CEACAMP11-201ENST00000455211 583 ntBASIC4.69□□□□□ -1.66
NKX2-1P43699 AC092905.1-201ENST00000467527 949 ntBASIC4.69□□□□□ -1.66
NKX2-1P43699 OR7E22P-201ENST00000478335 1035 ntBASIC4.69□□□□□ -1.66
NKX2-1P43699 RPS7P6-201ENST00000485777 579 ntBASIC4.69□□□□□ -1.66
NKX2-1P43699 LINC01995-201ENST00000489016 621 ntTSL 3 BASIC4.69□□□□□ -1.66
NKX2-1P43699 AC119751.4-201ENST00000507498 357 ntBASIC4.69□□□□□ -1.66
NKX2-1P43699 AC117383.1-201ENST00000507698 422 ntTSL 3 BASIC4.69□□□□□ -1.66
NKX2-1P43699 RNU6-1102P-201ENST00000516149 96 ntBASIC4.69□□□□□ -1.66
NKX2-1P43699 SNORA74.1-201ENST00000516320 180 ntBASIC4.69□□□□□ -1.66
NKX2-1P43699 C8orf22-204ENST00000522267 739 ntAPPRIS ALT1 TSL 2 BASIC4.69□□□□□ -1.66
NKX2-1P43699 AP000859.1-201ENST00000525536 307 ntBASIC4.69□□□□□ -1.66
NKX2-1P43699 AP000942.2-201ENST00000526310 628 ntTSL 3 BASIC4.69□□□□□ -1.66
NKX2-1P43699 AC113192.3-201ENST00000529152 742 ntBASIC4.69□□□□□ -1.66
NKX2-1P43699 AC026894.1-201ENST00000532930 850 ntTSL 3 BASIC4.69□□□□□ -1.66
NKX2-1P43699 OSBPL9P3-201ENST00000534523 595 ntBASIC4.69□□□□□ -1.66
NKX2-1P43699 EQTN-204ENST00000537675 879 ntAPPRIS ALT2 TSL 1 (best) BASIC4.69□□□□□ -1.66
NKX2-1P43699 AL049836.2-201ENST00000553318 513 ntTSL 5 BASIC4.69□□□□□ -1.66
NKX2-1P43699 AC025918.2-201ENST00000558683 763 ntBASIC4.69□□□□□ -1.66
NKX2-1P43699 AC090125.1-201ENST00000581541 493 ntTSL 3 BASIC4.69□□□□□ -1.66
NKX2-1P43699 LINC01916-201ENST00000582028 559 ntTSL 4 BASIC4.69□□□□□ -1.66
NKX2-1P43699 LINC01533-201ENST00000585739 616 ntTSL 5 BASIC4.69□□□□□ -1.66
NKX2-1P43699 AC024075.3-201ENST00000601687 453 ntTSL 5 BASIC4.69□□□□□ -1.66
NKX2-1P43699 AP003117.1-201ENST00000602771 554 ntBASIC4.69□□□□□ -1.66
NKX2-1P43699 NQO2-209ENST00000606474 470 ntTSL 3 BASIC4.69□□□□□ -1.66
NKX2-1P43699 Z95327.3-201ENST00000610385 572 ntBASIC4.69□□□□□ -1.66
NKX2-1P43699 GAPDHP41-201ENST00000613707 975 ntBASIC4.69□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 69.8 ms