Protein–RNA interactions for Protein: P43378

PTPN9, Tyrosine-protein phosphatase non-receptor type 9, humanhuman

Predictions only

Length 593 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN9P43378 KCNMA1-AS3-201ENST00000418515 701 ntTSL 3 BASIC5.83□□□□□ -1.48
PTPN9P43378 AL021153.1-201ENST00000427360 308 ntTSL 3 BASIC5.83□□□□□ -1.48
PTPN9P43378 AP001476.3-201ENST00000429512 415 ntTSL 3 BASIC5.83□□□□□ -1.48
PTPN9P43378 BX276092.6-201ENST00000430476 250 ntBASIC5.83□□□□□ -1.48
PTPN9P43378 AC012668.2-201ENST00000431727 503 ntTSL 3 BASIC5.83□□□□□ -1.48
PTPN9P43378 AL353681.1-201ENST00000435828 731 ntTSL 3 BASIC5.83□□□□□ -1.48
PTPN9P43378 AL450996.1-201ENST00000445574 1202 ntBASIC5.83□□□□□ -1.48
PTPN9P43378 AP000470.1-201ENST00000448063 693 ntTSL 5 BASIC5.83□□□□□ -1.48
PTPN9P43378 AL450023.1-201ENST00000450868 751 ntBASIC5.83□□□□□ -1.48
PTPN9P43378 AZGP1P2-201ENST00000454506 345 ntBASIC5.83□□□□□ -1.48
PTPN9P43378 BX276092.8-201ENST00000455722 250 ntBASIC5.83□□□□□ -1.48
PTPN9P43378 RN7SL188P-201ENST00000469842 285 ntBASIC5.83□□□□□ -1.48
PTPN9P43378 AC015908.1-201ENST00000478739 476 ntBASIC5.83□□□□□ -1.48
PTPN9P43378 CCDC169-211ENST00000503173 837 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
PTPN9P43378 AC012629.1-201ENST00000503953 342 ntTSL 3 BASIC5.83□□□□□ -1.48
PTPN9P43378 AC068672.3-203ENST00000505166 311 ntTSL 3 BASIC5.83□□□□□ -1.48
PTPN9P43378 LINC02270-201ENST00000505386 610 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
PTPN9P43378 AC111000.6-201ENST00000514471 709 ntBASIC5.83□□□□□ -1.48
PTPN9P43378 AC010261.2-201ENST00000515563 588 ntTSL 2 BASIC5.83□□□□□ -1.48
PTPN9P43378 C11orf65-206ENST00000529391 973 ntAPPRIS P1 TSL 2 BASIC5.83□□□□□ -1.48
PTPN9P43378 OR5AM1P-201ENST00000532136 1032 ntBASIC5.83□□□□□ -1.48
PTPN9P43378 AC008149.1-201ENST00000551844 525 ntTSL 4 BASIC5.83□□□□□ -1.48
PTPN9P43378 AP000842.3-201ENST00000564354 808 ntTSL 3 BASIC5.83□□□□□ -1.48
PTPN9P43378 PWRN3-201ENST00000566797 849 ntTSL 5 BASIC5.83□□□□□ -1.48
PTPN9P43378 AP005433.1-201ENST00000582939 620 ntTSL 2 BASIC5.83□□□□□ -1.48
PTPN9P43378 AC021517.1-203ENST00000590257 421 ntTSL 3 BASIC5.83□□□□□ -1.48
PTPN9P43378 AC026786.2-201ENST00000606110 392 ntTSL 3 BASIC5.83□□□□□ -1.48
PTPN9P43378 AL358975.1-202ENST00000628133 589 ntTSL 5 BASIC5.83□□□□□ -1.48
PTPN9P43378 AC008691.1-209ENST00000642094 814 ntBASIC5.83□□□□□ -1.48
PTPN9P43378 YES1P1-201ENST00000418510 1628 ntBASIC5.83□□□□□ -1.48
PTPN9P43378 SERPINB7-207ENST00000546027 1951 ntAPPRIS P1 TSL 2 BASIC5.83□□□□□ -1.48
PTPN9P43378 ATF7IP2-201ENST00000324570 3396 ntTSL 5 BASIC5.83□□□□□ -1.48
PTPN9P43378 MT-RNR2-201ENST00000387347 1559 ntBASIC5.83□□□□□ -1.48
PTPN9P43378 OR2J3-202ENST00000641151 3297 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
PTPN9P43378 AP000473.2-201ENST00000602659 1537 ntBASIC5.83□□□□□ -1.48
PTPN9P43378 AP002512.4-202ENST00000641599 4530 ntBASIC5.83□□□□□ -1.48
PTPN9P43378 AC068870.1-201ENST00000563737 2455 ntBASIC5.83□□□□□ -1.48
PTPN9P43378 SLC38A9-218ENST00000512595 1756 ntTSL 2 BASIC5.83□□□□□ -1.48
PTPN9P43378 NOVA1-213ENST00000574031 1431 ntTSL 2 BASIC5.82□□□□□ -1.48
PTPN9P43378 SLC4A10-202ENST00000375514 5710 ntAPPRIS ALT1 TSL 2 BASIC5.82□□□□□ -1.48
PTPN9P43378 FP236241.1-201ENST00000623374 7632 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
PTPN9P43378 CU633967.1-211ENST00000624444 7628 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
PTPN9P43378 CRB1-203ENST00000367400 4932 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
PTPN9P43378 MKI67-201ENST00000368653 11417 ntAPPRIS ALT2 TSL 2 BASIC5.82□□□□□ -1.48
PTPN9P43378 AC020633.1-201ENST00000468439 2247 ntBASIC5.82□□□□□ -1.48
PTPN9P43378 AFF2-201ENST00000286437 12280 ntTSL 2 BASIC5.82□□□□□ -1.48
PTPN9P43378 AC006484.1-201ENST00000435086 1884 ntBASIC5.82□□□□□ -1.48
PTPN9P43378 LINC01538-201ENST00000588074 2408 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
PTPN9P43378 OR7G2-201ENST00000305456 1038 ntAPPRIS P2 BASIC5.82□□□□□ -1.48
PTPN9P43378 WFDC11-202ENST00000356562 642 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
PTPN9P43378 RNA5SP510-201ENST00000364697 99 ntBASIC5.82□□□□□ -1.48
PTPN9P43378 CDC123-202ENST00000378900 933 ntTSL 5 BASIC5.82□□□□□ -1.48
PTPN9P43378 AC003035.1-201ENST00000391359 544 ntTSL 3 BASIC5.82□□□□□ -1.48
PTPN9P43378 CABYR-204ENST00000399499 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC5.82□□□□□ -1.48
PTPN9P43378 MIR3681HG-202ENST00000412606 578 ntTSL 5 BASIC5.82□□□□□ -1.48
PTPN9P43378 AL596448.1-201ENST00000415024 392 ntBASIC5.82□□□□□ -1.48
PTPN9P43378 AL354868.1-201ENST00000417077 482 ntBASIC5.82□□□□□ -1.48
PTPN9P43378 C9orf57-202ENST00000424431 1297 ntAPPRIS ALT2 TSL 1 (best) BASIC5.82□□□□□ -1.48
PTPN9P43378 OR4K3-201ENST00000425829 947 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
PTPN9P43378 AC138761.5-201ENST00000433967 325 ntBASIC5.82□□□□□ -1.48
PTPN9P43378 GUSBP6-201ENST00000434932 640 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
PTPN9P43378 LINC01448-201ENST00000455947 1171 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
PTPN9P43378 AC090543.1-201ENST00000492168 485 ntBASIC5.82□□□□□ -1.48
PTPN9P43378 SSR3-208ENST00000496050 579 ntTSL 4 BASIC5.82□□□□□ -1.48
PTPN9P43378 NADK2-AS1-201ENST00000501794 720 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
PTPN9P43378 LINC01612-201ENST00000504509 469 ntTSL 3 BASIC5.82□□□□□ -1.48
PTPN9P43378 AC138866.2-201ENST00000508650 584 ntBASIC5.82□□□□□ -1.48
PTPN9P43378 ASNSP4-201ENST00000511103 447 ntBASIC5.82□□□□□ -1.48
PTPN9P43378 AC034238.3-201ENST00000512349 591 ntTSL 4 BASIC5.82□□□□□ -1.48
PTPN9P43378 RNU6-889P-201ENST00000517189 103 ntBASIC5.82□□□□□ -1.48
PTPN9P43378 NRBF2P4-201ENST00000520874 850 ntBASIC5.82□□□□□ -1.48
PTPN9P43378 MINCR-206ENST00000524335 499 ntTSL 2 BASIC5.82□□□□□ -1.48
PTPN9P43378 OR4A17P-201ENST00000526032 904 ntBASIC5.82□□□□□ -1.48
PTPN9P43378 ASB8-202ENST00000535055 657 ntTSL 2 BASIC5.82□□□□□ -1.48
PTPN9P43378 AC027544.2-201ENST00000539313 630 ntTSL 5 BASIC5.82□□□□□ -1.48
PTPN9P43378 AC004551.1-201ENST00000552784 575 ntTSL 4 BASIC5.82□□□□□ -1.48
PTPN9P43378 AC007431.2-201ENST00000577189 563 ntTSL 2 BASIC5.82□□□□□ -1.48
PTPN9P43378 KATNBL1P5-201ENST00000605015 517 ntBASIC5.82□□□□□ -1.48
PTPN9P43378 AL513314.2-202ENST00000617077 536 ntTSL 5 BASIC5.82□□□□□ -1.48
PTPN9P43378 CC2D2B-209ENST00000618242 980 ntTSL 5 BASIC5.82□□□□□ -1.48
PTPN9P43378 MIR6861-201ENST00000618657 64 ntBASIC5.82□□□□□ -1.48
PTPN9P43378 AL513314.2-201ENST00000621440 545 ntTSL 5 BASIC5.82□□□□□ -1.48
PTPN9P43378 CU639417.4-201ENST00000623928 207 ntBASIC5.82□□□□□ -1.48
PTPN9P43378 CLDN12-203ENST00000394605 3488 ntAPPRIS P1 TSL 2 BASIC5.82□□□□□ -1.48
PTPN9P43378 IGF2BP2-AS1-202ENST00000456447 1531 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
PTPN9P43378 SDAD1-203ENST00000395711 2513 ntTSL 2 BASIC5.82□□□□□ -1.48
PTPN9P43378 CLIP1-AS1-201ENST00000535976 1745 ntTSL 3 BASIC5.82□□□□□ -1.48
PTPN9P43378 ROR1-204ENST00000545203 5362 ntAPPRIS ALT2 TSL 5 BASIC5.82□□□□□ -1.48
PTPN9P43378 PINCR-201ENST00000440955 2228 ntTSL 2 BASIC5.82□□□□□ -1.48
PTPN9P43378 AC114786.1-201ENST00000512892 1415 ntBASIC5.82□□□□□ -1.48
PTPN9P43378 MAPKAPK5P1-201ENST00000431810 1376 ntBASIC5.81□□□□□ -1.48
PTPN9P43378 KIAA1328-202ENST00000586135 1863 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
PTPN9P43378 ZNF431-201ENST00000311048 13894 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
PTPN9P43378 SPRR2D-201ENST00000360379 682 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
PTPN9P43378 RNA5SP453-201ENST00000362503 119 ntBASIC5.81□□□□□ -1.48
PTPN9P43378 RN7SKP15-201ENST00000364742 309 ntBASIC5.81□□□□□ -1.48
PTPN9P43378 IGLV3-10-201ENST00000390315 382 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
PTPN9P43378 CAPSL-201ENST00000397366 969 ntAPPRIS P1 TSL 3 BASIC5.81□□□□□ -1.48
PTPN9P43378 CBX1P3-201ENST00000413296 527 ntBASIC5.81□□□□□ -1.48
PTPN9P43378 OR2AT2P-201ENST00000413438 905 ntBASIC5.81□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 172.7 ms