Protein–RNA interactions for Protein: P26045

PTPN3, Tyrosine-protein phosphatase non-receptor type 3, humanhuman

Predictions only

Length 913 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3P26045 AC087301.1-201ENST00000579037 321 ntTSL 3 BASIC5.6□□□□□ -1.51
PTPN3P26045 AC012313.4-201ENST00000596296 495 ntTSL 3 BASIC5.6□□□□□ -1.51
PTPN3P26045 AP000769.2-201ENST00000602344 396 ntBASIC5.6□□□□□ -1.51
PTPN3P26045 AL118522.2-201ENST00000616045 615 ntBASIC5.6□□□□□ -1.51
PTPN3P26045 RNA5SP439-201ENST00000617595 124 ntBASIC5.6□□□□□ -1.51
PTPN3P26045 Metazoa_SRP.55-201ENST00000618452 275 ntBASIC5.6□□□□□ -1.51
PTPN3P26045 LINC01125-249ENST00000627399 1067 ntAPPRIS P5 TSL 5 BASIC5.6□□□□□ -1.51
PTPN3P26045 AGO2-201ENST00000220592 14581 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
PTPN3P26045 ST8SIA4-201ENST00000231461 6303 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
PTPN3P26045 POLK-210ENST00000508526 2019 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
PTPN3P26045 GBA3-205ENST00000511446 2018 ntTSL 2 BASIC5.6□□□□□ -1.51
PTPN3P26045 MAP9-208ENST00000515654 2044 ntTSL 5 BASIC5.6□□□□□ -1.51
PTPN3P26045 AFP-201ENST00000226359 1914 ntTSL 5 BASIC5.6□□□□□ -1.51
PTPN3P26045 PSG1-202ENST00000312439 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC5.6□□□□□ -1.51
PTPN3P26045 RAPGEF4-213ENST00000535187 3707 ntTSL 2 BASIC5.6□□□□□ -1.51
PTPN3P26045 VPS13C-204ENST00000395898 11012 ntAPPRIS ALT2 TSL 1 (best) BASIC5.6□□□□□ -1.51
PTPN3P26045 TRPM3-209ENST00000377110 12258 ntAPPRIS ALT1 TSL 1 (best) BASIC5.6□□□□□ -1.51
PTPN3P26045 LINS1-214ENST00000561308 1612 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
PTPN3P26045 EOGT-208ENST00000540764 1584 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
PTPN3P26045 AL121594.3-201ENST00000557565 3857 ntAPPRIS P1 TSL 2 BASIC5.59□□□□□ -1.51
PTPN3P26045 DLGAP5-202ENST00000395425 2954 ntAPPRIS ALT2 TSL 1 (best) BASIC5.59□□□□□ -1.51
PTPN3P26045 ZNF343-207ENST00000612935 3675 ntAPPRIS ALT2 TSL 5 BASIC5.59□□□□□ -1.51
PTPN3P26045 SLC26A7-208ENST00000523719 2902 ntAPPRIS P1 TSL 2 BASIC5.59□□□□□ -1.51
PTPN3P26045 FOXN2-203ENST00000616844 1414 ntTSL 5 BASIC5.59□□□□□ -1.51
PTPN3P26045 MCM9-209ENST00000619706 4822 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.51
PTPN3P26045 ZNF215-205ENST00000529903 1396 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
PTPN3P26045 HIST1H1A-201ENST00000244573 648 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
PTPN3P26045 MRPS36-201ENST00000256441 1286 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
PTPN3P26045 RN7SKP28-201ENST00000364770 305 ntBASIC5.59□□□□□ -1.51
PTPN3P26045 C1orf194-204ENST00000369949 731 ntTSL 2 BASIC5.59□□□□□ -1.51
PTPN3P26045 PRH2-201ENST00000381847 641 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
PTPN3P26045 RNA5SP122-201ENST00000384457 108 ntBASIC5.59□□□□□ -1.51
PTPN3P26045 RNU6-1263P-201ENST00000384601 106 ntBASIC5.59□□□□□ -1.51
PTPN3P26045 AL139039.2-201ENST00000407436 479 ntBASIC5.59□□□□□ -1.51
PTPN3P26045 SNORA79B-201ENST00000410557 148 ntBASIC5.59□□□□□ -1.51
PTPN3P26045 RPS27AP6-201ENST00000427962 448 ntBASIC5.59□□□□□ -1.51
PTPN3P26045 BACH1-IT3-201ENST00000429843 406 ntTSL 2 BASIC5.59□□□□□ -1.51
PTPN3P26045 AC093581.1-201ENST00000446411 461 ntTSL 2 BASIC5.59□□□□□ -1.51
PTPN3P26045 RBMY2TP-201ENST00000451162 947 ntBASIC5.59□□□□□ -1.51
PTPN3P26045 AL023584.2-201ENST00000454411 444 ntTSL 5 BASIC5.59□□□□□ -1.51
PTPN3P26045 TAAR4P-201ENST00000454843 1039 ntBASIC5.59□□□□□ -1.51
PTPN3P26045 EFCAB10-203ENST00000480514 740 ntAPPRIS ALT1 TSL 1 (best) BASIC5.59□□□□□ -1.51
PTPN3P26045 ATG10-AS1-201ENST00000504846 648 ntBASIC5.59□□□□□ -1.51
PTPN3P26045 AC009623.1-201ENST00000517964 1131 ntTSL 2 BASIC5.59□□□□□ -1.51
PTPN3P26045 AC008705.1-201ENST00000518837 489 ntTSL 3 BASIC5.59□□□□□ -1.51
PTPN3P26045 TRDV3-201ENST00000535880 425 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
PTPN3P26045 OR11H3P-201ENST00000554547 982 ntBASIC5.59□□□□□ -1.51
PTPN3P26045 AC026992.1-201ENST00000558269 571 ntTSL 2 BASIC5.59□□□□□ -1.51
PTPN3P26045 AC090888.3-201ENST00000558917 509 ntBASIC5.59□□□□□ -1.51
PTPN3P26045 PWRN1-207ENST00000565893 818 ntTSL 3 BASIC5.59□□□□□ -1.51
PTPN3P26045 MRO-208ENST00000588444 866 ntTSL 3 BASIC5.59□□□□□ -1.51
PTPN3P26045 XIST-210ENST00000602863 775 ntTSL 3 BASIC5.59□□□□□ -1.51
PTPN3P26045 AC022387.2-201ENST00000604050 448 ntBASIC5.59□□□□□ -1.51
PTPN3P26045 AC015982.1-201ENST00000608113 465 ntBASIC5.59□□□□□ -1.51
PTPN3P26045 AL451049.1-201ENST00000608672 497 ntBASIC5.59□□□□□ -1.51
PTPN3P26045 AL592494.3-201ENST00000609485 464 ntBASIC5.59□□□□□ -1.51
PTPN3P26045 AC015922.4-201ENST00000612568 690 ntBASIC5.59□□□□□ -1.51
PTPN3P26045 LINC02033-201ENST00000623207 971 ntTSL 2 BASIC5.59□□□□□ -1.51
PTPN3P26045 AC104820.1-201ENST00000624183 307 ntBASIC5.59□□□□□ -1.51
PTPN3P26045 AC135068.5-201ENST00000624197 983 ntBASIC5.59□□□□□ -1.51
PTPN3P26045 AC007683.2-201ENST00000624681 714 ntBASIC5.59□□□□□ -1.51
PTPN3P26045 AC068631.1-223ENST00000625877 472 ntTSL 5 BASIC5.59□□□□□ -1.51
PTPN3P26045 AC073869.8-201ENST00000641806 335 ntBASIC5.59□□□□□ -1.51
PTPN3P26045 EMSY-206ENST00000525038 4376 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
PTPN3P26045 NSD1-202ENST00000354179 12195 ntTSL 5 BASIC5.59□□□□□ -1.51
PTPN3P26045 FLRT3-202ENST00000378053 4776 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
PTPN3P26045 TCF7L2-206ENST00000355995 4073 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
PTPN3P26045 PPARGC1A-201ENST00000264867 6318 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
PTPN3P26045 SLCO1C1-208ENST00000545102 2868 ntTSL 2 BASIC5.59□□□□□ -1.51
PTPN3P26045 ENPP2-208ENST00000522826 2667 ntAPPRIS ALT1 TSL 1 (best) BASIC5.59□□□□□ -1.52
PTPN3P26045 ENPP2-201ENST00000075322 2651 ntAPPRIS ALT1 TSL 1 (best) BASIC5.59□□□□□ -1.52
PTPN3P26045 GEN1-202ENST00000381254 6367 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.52
PTPN3P26045 ATF2-201ENST00000264110 4176 ntTSL 1 (best) BASIC5.59□□□□□ -1.52
PTPN3P26045 GAPT-202ENST00000396776 3016 ntAPPRIS P1 TSL 2 BASIC5.58□□□□□ -1.52
PTPN3P26045 AP005432.1-201ENST00000580891 3485 ntBASIC5.58□□□□□ -1.52
PTPN3P26045 GTDC1-203ENST00000392867 2408 ntTSL 5 BASIC5.58□□□□□ -1.52
PTPN3P26045 AL356317.1-201ENST00000396110 1436 ntBASIC5.58□□□□□ -1.52
PTPN3P26045 OR10G4-203ENST00000641722 3301 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
PTPN3P26045 ANK3-201ENST00000280772 16874 ntAPPRIS P3 TSL 1 (best) BASIC5.58□□□□□ -1.52
PTPN3P26045 KIAA0408-204ENST00000483725 3284 ntAPPRIS P2 TSL 5 BASIC5.58□□□□□ -1.52
PTPN3P26045 XRN1-201ENST00000264951 10143 ntAPPRIS P3 TSL 1 (best) BASIC5.58□□□□□ -1.52
PTPN3P26045 AL360270.2-201ENST00000562952 5985 ntBASIC5.58□□□□□ -1.52
PTPN3P26045 DDX3Y-201ENST00000336079 4445 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
PTPN3P26045 DMTF1-204ENST00000413276 3548 ntTSL 5 BASIC5.58□□□□□ -1.52
PTPN3P26045 NCOA1-206ENST00000407230 4745 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
PTPN3P26045 CRYAB-201ENST00000227251 848 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
PTPN3P26045 HBG1-201ENST00000330597 808 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
PTPN3P26045 SNTN-201ENST00000343837 1090 ntAPPRIS P1 TSL 2 BASIC5.58□□□□□ -1.52
PTPN3P26045 RNU6-670P-201ENST00000364312 104 ntBASIC5.58□□□□□ -1.52
PTPN3P26045 SSX1-201ENST00000376919 1298 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
PTPN3P26045 RNU6-1320P-201ENST00000390838 107 ntBASIC5.58□□□□□ -1.52
PTPN3P26045 RNU6-1269P-201ENST00000391139 107 ntBASIC5.58□□□□□ -1.52
PTPN3P26045 AL391987.2-201ENST00000421848 492 ntTSL 5 BASIC5.58□□□□□ -1.52
PTPN3P26045 TNPO1P1-201ENST00000423641 1138 ntBASIC5.58□□□□□ -1.52
PTPN3P26045 DSTNP5-201ENST00000427921 523 ntBASIC5.58□□□□□ -1.52
PTPN3P26045 AC018832.1-201ENST00000428171 566 ntTSL 4 BASIC5.58□□□□□ -1.52
PTPN3P26045 AC092920.1-201ENST00000428516 678 ntTSL 5 BASIC5.58□□□□□ -1.52
PTPN3P26045 AC079807.1-201ENST00000429993 481 ntBASIC5.58□□□□□ -1.52
PTPN3P26045 AC003991.1-210ENST00000434733 1048 ntTSL 3 BASIC5.58□□□□□ -1.52
PTPN3P26045 HMGB3P10-201ENST00000434734 572 ntBASIC5.58□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 70.6 ms