Protein–RNA interactions for Protein: P12110

COL6A2, Collagen alpha-2(VI) chain, humanhuman

Predictions only

Length 1,019 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2P12110 VCAM1-201ENST00000294728 3083 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
COL6A2P12110 NLRP11-204ENST00000592953 3077 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
COL6A2P12110 SLC35A5-201ENST00000261034 2444 ntTSL 5 BASIC6.33□□□□□ -1.4
COL6A2P12110 EIF1B-201ENST00000232905 1010 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
COL6A2P12110 OR6P1-201ENST00000334632 954 ntAPPRIS P1 BASIC6.33□□□□□ -1.4
COL6A2P12110 SEC61G-201ENST00000352861 462 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
COL6A2P12110 FAS-205ENST00000357339 1044 ntAPPRIS ALT2 TSL 1 (best) BASIC6.33□□□□□ -1.4
COL6A2P12110 PLAC1-201ENST00000359237 1131 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
COL6A2P12110 RNA5SP140-201ENST00000364524 92 ntBASIC6.33□□□□□ -1.4
COL6A2P12110 RNU6-192P-201ENST00000391253 100 ntBASIC6.33□□□□□ -1.4
COL6A2P12110 RPS3AP26-201ENST00000398259 784 ntBASIC6.33□□□□□ -1.4
COL6A2P12110 RPL31-206ENST00000409650 770 ntAPPRIS ALT1 TSL 2 BASIC6.33□□□□□ -1.4
COL6A2P12110 RN7SKP129-201ENST00000410288 299 ntBASIC6.33□□□□□ -1.4
COL6A2P12110 OR4K6P-201ENST00000416478 897 ntBASIC6.33□□□□□ -1.4
COL6A2P12110 AC007879.3-201ENST00000417096 556 ntTSL 4 BASIC6.33□□□□□ -1.4
COL6A2P12110 LINC01347-201ENST00000417964 355 ntBASIC6.33□□□□□ -1.4
COL6A2P12110 AL049712.1-201ENST00000418739 872 ntTSL 3 BASIC6.33□□□□□ -1.4
COL6A2P12110 LINC02263-202ENST00000420701 597 ntTSL 5 BASIC6.33□□□□□ -1.4
COL6A2P12110 RPL7P53-201ENST00000421245 739 ntBASIC6.33□□□□□ -1.4
COL6A2P12110 AC007562.1-201ENST00000421819 517 ntBASIC6.33□□□□□ -1.4
COL6A2P12110 AC246680.2-201ENST00000422106 389 ntBASIC6.33□□□□□ -1.4
COL6A2P12110 LINC01318-201ENST00000423593 597 ntTSL 4 BASIC6.33□□□□□ -1.4
COL6A2P12110 RPL7AP14-201ENST00000424041 802 ntBASIC6.33□□□□□ -1.4
COL6A2P12110 AC117944.1-201ENST00000430748 641 ntTSL 3 BASIC6.33□□□□□ -1.4
COL6A2P12110 AL590399.4-201ENST00000436561 601 ntBASIC6.33□□□□□ -1.4
COL6A2P12110 LRTOMT-209ENST00000440313 253 ntTSL 3 BASIC6.33□□□□□ -1.4
COL6A2P12110 LINC01309-201ENST00000444795 492 ntTSL 3 BASIC6.33□□□□□ -1.4
COL6A2P12110 AC023274.2-201ENST00000445264 521 ntBASIC6.33□□□□□ -1.4
COL6A2P12110 AC003035.2-201ENST00000448948 696 ntTSL 3 BASIC6.33□□□□□ -1.4
COL6A2P12110 AC092967.1-201ENST00000449016 481 ntBASIC6.33□□□□□ -1.4
COL6A2P12110 AC079896.1-201ENST00000455845 488 ntTSL 3 BASIC6.33□□□□□ -1.4
COL6A2P12110 RNU7-125P-201ENST00000458760 62 ntBASIC6.33□□□□□ -1.4
COL6A2P12110 SEPT7P9-201ENST00000475691 413 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
COL6A2P12110 AC008705.1-201ENST00000518837 489 ntTSL 3 BASIC6.33□□□□□ -1.4
COL6A2P12110 COX6B1P4-201ENST00000519826 484 ntBASIC6.33□□□□□ -1.4
COL6A2P12110 PTK2-220ENST00000520151 573 ntTSL 4 BASIC6.33□□□□□ -1.4
COL6A2P12110 IGHVIII-11-1-201ENST00000522733 267 ntBASIC6.33□□□□□ -1.4
COL6A2P12110 AC105177.1-201ENST00000523110 555 ntTSL 4 BASIC6.33□□□□□ -1.4
COL6A2P12110 AP002833.2-201ENST00000531585 462 ntTSL 3 BASIC6.33□□□□□ -1.4
COL6A2P12110 SOX9-AS1-214ENST00000540802 578 ntTSL 4 BASIC6.33□□□□□ -1.4
COL6A2P12110 RAB3IP-214ENST00000550847 670 ntTSL 3 BASIC6.33□□□□□ -1.4
COL6A2P12110 HNRNPCP1-201ENST00000556181 766 ntBASIC6.33□□□□□ -1.4
COL6A2P12110 WDR61-205ENST00000558459 884 ntTSL 3 BASIC6.33□□□□□ -1.4
COL6A2P12110 AC007494.1-201ENST00000562293 760 ntBASIC6.33□□□□□ -1.4
COL6A2P12110 AC087463.4-202ENST00000566676 579 ntTSL 3 BASIC6.33□□□□□ -1.4
COL6A2P12110 AC139099.3-202ENST00000574856 439 ntTSL 2 BASIC6.33□□□□□ -1.4
COL6A2P12110 AL133410.1-201ENST00000574939 546 ntTSL 3 BASIC6.33□□□□□ -1.4
COL6A2P12110 CT45A3-201ENST00000597510 1076 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
COL6A2P12110 ZNF43-209ENST00000598288 560 ntTSL 4 BASIC6.33□□□□□ -1.4
COL6A2P12110 AC243960.3-202ENST00000599770 594 ntTSL 4 BASIC6.33□□□□□ -1.4
COL6A2P12110 RPS4XP21-201ENST00000603814 750 ntBASIC6.33□□□□□ -1.4
COL6A2P12110 LAPTM4BP2-201ENST00000604542 446 ntBASIC6.33□□□□□ -1.4
COL6A2P12110 AC064872.1-201ENST00000604823 1072 ntBASIC6.33□□□□□ -1.4
COL6A2P12110 CT45A2-201ENST00000605791 1076 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
COL6A2P12110 AC244100.1-201ENST00000618141 407 ntTSL 5 BASIC6.33□□□□□ -1.4
COL6A2P12110 AC027506.1-201ENST00000621395 198 ntBASIC6.33□□□□□ -1.4
COL6A2P12110 AP003108.4-201ENST00000623917 878 ntBASIC6.33□□□□□ -1.4
COL6A2P12110 PAQR5-201ENST00000340965 4943 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
COL6A2P12110 ZEB2-244ENST00000638007 9140 ntTSL 5 BASIC6.33□□□□□ -1.4
COL6A2P12110 AL391704.1-201ENST00000422206 2368 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
COL6A2P12110 ZNF644-204ENST00000370440 5702 ntAPPRIS P1 TSL 5 BASIC6.33□□□□□ -1.4
COL6A2P12110 DLG2-207ENST00000398309 7890 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
COL6A2P12110 DCTN5-201ENST00000300087 11011 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
COL6A2P12110 CLRN1-AS1-201ENST00000465576 2045 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
COL6A2P12110 TRPC1-205ENST00000612385 3620 ntAPPRIS P3 TSL 1 (best) BASIC6.33□□□□□ -1.4
COL6A2P12110 AL592429.1-201ENST00000403909 1473 ntBASIC6.33□□□□□ -1.4
COL6A2P12110 MUSK-206ENST00000416899 3344 ntTSL 5 BASIC6.33□□□□□ -1.4
COL6A2P12110 LINC00698-203ENST00000468072 1957 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
COL6A2P12110 AC125238.2-201ENST00000430003 1440 ntBASIC6.33□□□□□ -1.4
COL6A2P12110 MGC32805-205ENST00000510972 1424 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
COL6A2P12110 ZMYM2-210ENST00000610343 10200 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
COL6A2P12110 KCNJ2-201ENST00000243457 5392 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
COL6A2P12110 C2CD6-201ENST00000286195 2104 ntAPPRIS P3 TSL 1 (best) BASIC6.32□□□□□ -1.4
COL6A2P12110 AOX3P-204ENST00000491025 2107 ntBASIC6.32□□□□□ -1.4
COL6A2P12110 SREK1IP1-204ENST00000513458 6876 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
COL6A2P12110 OR2J1-202ENST00000641659 2144 ntAPPRIS P1 BASIC6.32□□□□□ -1.4
COL6A2P12110 DHX32-201ENST00000284690 3070 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
COL6A2P12110 MGP-201ENST00000228938 694 ntTSL 3 BASIC6.32□□□□□ -1.4
COL6A2P12110 PSMA6-201ENST00000261479 1029 ntAPPRIS P2 TSL 1 (best) BASIC6.32□□□□□ -1.4
COL6A2P12110 LALBA-201ENST00000301046 728 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
COL6A2P12110 RNA5SP429-201ENST00000363688 109 ntBASIC6.32□□□□□ -1.4
COL6A2P12110 OR10R2-201ENST00000368152 1008 ntAPPRIS P2 BASIC6.32□□□□□ -1.4
COL6A2P12110 SNORA40.2-201ENST00000390847 128 ntBASIC6.32□□□□□ -1.4
COL6A2P12110 AL590867.1-201ENST00000392385 1212 ntTSL 2 BASIC6.32□□□□□ -1.4
COL6A2P12110 AC011233.1-201ENST00000422812 283 ntBASIC6.32□□□□□ -1.4
COL6A2P12110 LINC00266-4P-201ENST00000427373 842 ntTSL 3 BASIC6.32□□□□□ -1.4
COL6A2P12110 AC010153.1-201ENST00000432862 727 ntBASIC6.32□□□□□ -1.4
COL6A2P12110 AC096632.2-201ENST00000438139 1239 ntBASIC6.32□□□□□ -1.4
COL6A2P12110 GABRG3-AS1-201ENST00000439938 970 ntTSL 2 BASIC6.32□□□□□ -1.4
COL6A2P12110 AL592114.2-201ENST00000440142 532 ntBASIC6.32□□□□□ -1.4
COL6A2P12110 AC097499.1-201ENST00000444277 208 ntBASIC6.32□□□□□ -1.4
COL6A2P12110 LINC01952-202ENST00000450016 281 ntTSL 3 BASIC6.32□□□□□ -1.4
COL6A2P12110 AURKAPS1-201ENST00000451805 1212 ntBASIC6.32□□□□□ -1.4
COL6A2P12110 AP001596.1-202ENST00000452460 644 ntTSL 3 BASIC6.32□□□□□ -1.4
COL6A2P12110 AC097262.1-201ENST00000452559 548 ntBASIC6.32□□□□□ -1.4
COL6A2P12110 LINC00894-208ENST00000455777 284 ntTSL 2 BASIC6.32□□□□□ -1.4
COL6A2P12110 AC026348.1-201ENST00000462549 1053 ntBASIC6.32□□□□□ -1.4
COL6A2P12110 AC090058.1-201ENST00000498788 435 ntBASIC6.32□□□□□ -1.4
COL6A2P12110 AC091860.1-201ENST00000505723 432 ntBASIC6.32□□□□□ -1.4
COL6A2P12110 MTCO1P49-201ENST00000523429 802 ntBASIC6.32□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 103 ms