Protein–RNA interactions for Protein: P09630

HOXC6, Homeobox protein Hox-C6, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6P09630 RNA5SP373-201ENST00000517271 95 ntBASIC6.16□□□□□ -1.42
HOXC6P09630 BRD9P1-201ENST00000529855 560 ntBASIC6.16□□□□□ -1.42
HOXC6P09630 OR4A6P-201ENST00000534364 970 ntBASIC6.16□□□□□ -1.42
HOXC6P09630 AC144548.2-201ENST00000550231 946 ntTSL 3 BASIC6.16□□□□□ -1.42
HOXC6P09630 CR383656.6-201ENST00000550518 394 ntBASIC6.16□□□□□ -1.42
HOXC6P09630 PCNPP1-201ENST00000552501 511 ntBASIC6.16□□□□□ -1.42
HOXC6P09630 AC016987.1-201ENST00000558587 499 ntTSL 2 BASIC6.16□□□□□ -1.42
HOXC6P09630 AC005341.1-201ENST00000571086 708 ntBASIC6.16□□□□□ -1.42
HOXC6P09630 AC107905.1-201ENST00000616204 426 ntBASIC6.16□□□□□ -1.42
HOXC6P09630 AC003001.2-201ENST00000616294 831 ntBASIC6.16□□□□□ -1.42
HOXC6P09630 GDNF-AS1-202ENST00000510986 1941 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
HOXC6P09630 DCN-218ENST00000551354 2924 ntTSL 3 BASIC6.16□□□□□ -1.42
HOXC6P09630 TERB1-203ENST00000558713 2257 ntAPPRIS P1 TSL 5 BASIC6.16□□□□□ -1.42
HOXC6P09630 MECOM-203ENST00000460814 3374 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
HOXC6P09630 ZNF431-201ENST00000311048 13894 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
HOXC6P09630 BTG4-203ENST00000525791 1394 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
HOXC6P09630 PYHIN1-203ENST00000368140 2083 ntAPPRIS P4 TSL 1 (best) BASIC6.16□□□□□ -1.42
HOXC6P09630 WDR12-201ENST00000261015 8100 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
HOXC6P09630 PTBP3-207ENST00000458258 7995 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
HOXC6P09630 NBPF20-205ENST00000622803 3689 ntTSL 5 BASIC6.15□□□□□ -1.42
HOXC6P09630 AC115220.1-201ENST00000330020 1453 ntAPPRIS P1 TSL 3 BASIC6.15□□□□□ -1.42
HOXC6P09630 MEMO1-202ENST00000379383 1498 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
HOXC6P09630 GPR1-201ENST00000407325 2295 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
HOXC6P09630 PCA3-201ENST00000412654 3922 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
HOXC6P09630 OR8G5-203ENST00000641992 1560 ntAPPRIS P1 BASIC6.15□□□□□ -1.42
HOXC6P09630 AC011933.2-201ENST00000578539 2790 ntBASIC6.15□□□□□ -1.42
HOXC6P09630 KCNQ3-205ENST00000621976 10659 ntAPPRIS ALT2 TSL 5 BASIC6.15□□□□□ -1.42
HOXC6P09630 AP000568.1-201ENST00000282964 442 ntBASIC6.15□□□□□ -1.42
HOXC6P09630 SPINK13-201ENST00000398450 509 ntAPPRIS P2 TSL 1 (best) BASIC6.15□□□□□ -1.42
HOXC6P09630 AC211486.3-201ENST00000412694 621 ntBASIC6.15□□□□□ -1.42
HOXC6P09630 RIMKLBP2-201ENST00000424737 654 ntBASIC6.15□□□□□ -1.42
HOXC6P09630 DPH5-204ENST00000427040 609 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
HOXC6P09630 KCNIP1-205ENST00000434108 726 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
HOXC6P09630 AC091685.1-201ENST00000442436 448 ntTSL 3 BASIC6.15□□□□□ -1.42
HOXC6P09630 VN1R96P-201ENST00000446052 858 ntBASIC6.15□□□□□ -1.42
HOXC6P09630 HNRNPDLP2-201ENST00000455248 751 ntBASIC6.15□□□□□ -1.42
HOXC6P09630 RPL5P16-201ENST00000471467 790 ntBASIC6.15□□□□□ -1.42
HOXC6P09630 LINC02200-202ENST00000508879 615 ntTSL 3 BASIC6.15□□□□□ -1.42
HOXC6P09630 AC093535.1-203ENST00000512500 730 ntTSL 3 BASIC6.15□□□□□ -1.42
HOXC6P09630 UBE2Q2P10-201ENST00000514854 900 ntBASIC6.15□□□□□ -1.42
HOXC6P09630 RN7SKP147-201ENST00000517154 244 ntBASIC6.15□□□□□ -1.42
HOXC6P09630 AC006511.5-202ENST00000546339 1198 ntTSL 5 BASIC6.15□□□□□ -1.42
HOXC6P09630 AC078880.1-201ENST00000546696 553 ntTSL 4 BASIC6.15□□□□□ -1.42
HOXC6P09630 AC025423.4-201ENST00000553141 785 ntTSL 3 BASIC6.15□□□□□ -1.42
HOXC6P09630 AC025271.2-201ENST00000566990 800 ntTSL 3 BASIC6.15□□□□□ -1.42
HOXC6P09630 AC018695.3-201ENST00000602617 408 ntTSL 2 BASIC6.15□□□□□ -1.42
HOXC6P09630 AC005084.1-201ENST00000605160 304 ntBASIC6.15□□□□□ -1.42
HOXC6P09630 BX322635.1-201ENST00000605804 496 ntBASIC6.15□□□□□ -1.42
HOXC6P09630 AC005972.3-201ENST00000606304 481 ntBASIC6.15□□□□□ -1.42
HOXC6P09630 PACRG-210ENST00000611387 279 ntTSL 5 BASIC6.15□□□□□ -1.42
HOXC6P09630 SHMT1-211ENST00000618902 378 ntTSL 5 BASIC6.15□□□□□ -1.42
HOXC6P09630 AC091953.3-201ENST00000623220 236 ntBASIC6.15□□□□□ -1.42
HOXC6P09630 AC099494.2-201ENST00000623371 978 ntBASIC6.15□□□□□ -1.42
HOXC6P09630 AC087632.1-216ENST00000625619 487 ntAPPRIS P1 TSL 3 BASIC6.15□□□□□ -1.42
HOXC6P09630 AC109462.4-201ENST00000637882 581 ntTSL 5 BASIC6.15□□□□□ -1.42
HOXC6P09630 ITCH-201ENST00000262650 3089 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
HOXC6P09630 SH3YL1-203ENST00000403657 3540 ntTSL 2 BASIC6.15□□□□□ -1.43
HOXC6P09630 PDE5A-203ENST00000394439 6770 ntAPPRIS ALT2 TSL 5 BASIC6.15□□□□□ -1.43
HOXC6P09630 MMP12-201ENST00000571244 1874 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
HOXC6P09630 CASC8-203ENST00000502082 1420 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
HOXC6P09630 TMPRSS15-201ENST00000284885 3947 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
HOXC6P09630 TTC39B-207ENST00000507993 1950 ntAPPRIS ALT2 TSL 2 BASIC6.15□□□□□ -1.43
HOXC6P09630 AC073365.1-203ENST00000641055 1992 ntBASIC6.15□□□□□ -1.43
HOXC6P09630 LINC02421-201ENST00000542219 3135 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
HOXC6P09630 NRDE2-201ENST00000354366 14208 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
HOXC6P09630 RUFY3-202ENST00000381006 3098 ntAPPRIS P1 TSL 5 BASIC6.14□□□□□ -1.43
HOXC6P09630 EPB41L2-226ENST00000530757 4360 ntTSL 2 BASIC6.14□□□□□ -1.43
HOXC6P09630 AC083799.1-201ENST00000366451 910 ntBASIC6.14□□□□□ -1.43
HOXC6P09630 AL035419.1-201ENST00000397037 564 ntBASIC6.14□□□□□ -1.43
HOXC6P09630 CXCL8-202ENST00000401931 700 ntAPPRIS ALT1 TSL 1 (best) BASIC6.14□□□□□ -1.43
HOXC6P09630 AC096921.1-201ENST00000411661 375 ntBASIC6.14□□□□□ -1.43
HOXC6P09630 C9orf57-202ENST00000424431 1297 ntAPPRIS ALT2 TSL 1 (best) BASIC6.14□□□□□ -1.43
HOXC6P09630 AL139231.1-201ENST00000431001 312 ntTSL 3 BASIC6.14□□□□□ -1.43
HOXC6P09630 AL354863.1-202ENST00000431695 494 ntTSL 5 BASIC6.14□□□□□ -1.43
HOXC6P09630 AC017002.1-201ENST00000432268 881 ntTSL 5 BASIC6.14□□□□□ -1.43
HOXC6P09630 USP12-AS1-201ENST00000440657 268 ntTSL 5 BASIC6.14□□□□□ -1.43
HOXC6P09630 AC093581.1-201ENST00000446411 461 ntTSL 2 BASIC6.14□□□□□ -1.43
HOXC6P09630 CASP12-208ENST00000448103 1071 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
HOXC6P09630 NDUFA5P8-201ENST00000449019 346 ntBASIC6.14□□□□□ -1.43
HOXC6P09630 BX546450.1-201ENST00000454307 482 ntTSL 2 BASIC6.14□□□□□ -1.43
HOXC6P09630 Z92846.1-201ENST00000456203 268 ntBASIC6.14□□□□□ -1.43
HOXC6P09630 RPS3AP41-201ENST00000462701 778 ntBASIC6.14□□□□□ -1.43
HOXC6P09630 SEC22A-207ENST00000481965 673 ntTSL 3 BASIC6.14□□□□□ -1.43
HOXC6P09630 CASP12-210ENST00000494737 961 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
HOXC6P09630 AC105233.1-201ENST00000498840 781 ntBASIC6.14□□□□□ -1.43
HOXC6P09630 RN7SKP67-201ENST00000515905 235 ntBASIC6.14□□□□□ -1.43
HOXC6P09630 AC137627.1-201ENST00000545761 289 ntBASIC6.14□□□□□ -1.43
HOXC6P09630 TRPT1-216ENST00000546133 382 ntTSL 2 BASIC6.14□□□□□ -1.43
HOXC6P09630 AC092078.1-201ENST00000558370 325 ntTSL 3 BASIC6.14□□□□□ -1.43
HOXC6P09630 AC104938.1-202ENST00000563041 630 ntTSL 3 BASIC6.14□□□□□ -1.43
HOXC6P09630 MIR3934-201ENST00000579806 107 ntBASIC6.14□□□□□ -1.43
HOXC6P09630 ZNF227-204ENST00000586228 569 ntTSL 2 BASIC6.14□□□□□ -1.43
HOXC6P09630 MIR4527HG-203ENST00000600127 704 ntTSL 5 BASIC6.14□□□□□ -1.43
HOXC6P09630 AC092474.3-201ENST00000603022 568 ntBASIC6.14□□□□□ -1.43
HOXC6P09630 INTS6-AS1-226ENST00000610018 672 ntTSL 5 BASIC6.14□□□□□ -1.43
HOXC6P09630 AL138960.2-201ENST00000625145 535 ntBASIC6.14□□□□□ -1.43
HOXC6P09630 AC106799.3-201ENST00000562127 3300 ntTSL 2 BASIC6.14□□□□□ -1.43
HOXC6P09630 PRUNE2-201ENST00000223609 2697 ntTSL 2 BASIC6.14□□□□□ -1.43
HOXC6P09630 EXOC1-201ENST00000346134 3357 ntAPPRIS P4 TSL 2 BASIC6.14□□□□□ -1.43
HOXC6P09630 SIAH1-202ENST00000380006 3352 ntAPPRIS P3 BASIC6.14□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 97.7 ms