Protein–RNA interactions for Protein: P09326

CD48, CD48 antigen, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD48P09326 ASNSD1-208ENST00000607690 535 ntTSL 2 BASIC5.55□□□□□ -1.52
CD48P09326 AC012467.1-201ENST00000607740 256 ntBASIC5.55□□□□□ -1.52
CD48P09326 ASNSD1-209ENST00000607829 581 ntTSL 2 BASIC5.55□□□□□ -1.52
CD48P09326 AC244131.2-201ENST00000612592 512 ntTSL 3 BASIC5.55□□□□□ -1.52
CD48P09326 CACNB4-221ENST00000636130 7748 ntTSL 5 BASIC5.55□□□□□ -1.52
CD48P09326 AFTPH-204ENST00000409933 2811 ntAPPRIS ALT1 TSL 1 (best) BASIC5.55□□□□□ -1.52
CD48P09326 KMT2D-201ENST00000301067 19419 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
CD48P09326 DYNC1I2-207ENST00000410079 2159 ntTSL 2 BASIC5.55□□□□□ -1.52
CD48P09326 AC005261.6-201ENST00000623072 1387 ntBASIC5.55□□□□□ -1.52
CD48P09326 PHACTR4-201ENST00000373836 3107 ntAPPRIS P4 TSL 5 BASIC5.54□□□□□ -1.52
CD48P09326 AC007998.4-201ENST00000612496 2533 ntBASIC5.54□□□□□ -1.52
CD48P09326 MAP3K2-201ENST00000344908 2135 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
CD48P09326 EDA2R-203ENST00000396050 3429 ntAPPRIS ALT2 TSL 5 BASIC5.54□□□□□ -1.52
CD48P09326 ZNF790-201ENST00000356725 3037 ntAPPRIS P1 TSL 2 BASIC5.54□□□□□ -1.52
CD48P09326 KCTD4-201ENST00000379108 1865 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
CD48P09326 MRPL35-202ENST00000337109 3727 ntAPPRIS P4 TSL 1 (best) BASIC5.54□□□□□ -1.52
CD48P09326 NPIPB9-201ENST00000357796 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC5.54□□□□□ -1.52
CD48P09326 HMMR-203ENST00000393915 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC5.54□□□□□ -1.52
CD48P09326 FHIT-201ENST00000341848 174 ntTSL 3 BASIC5.54□□□□□ -1.52
CD48P09326 RNA5SP319-201ENST00000362768 119 ntBASIC5.54□□□□□ -1.52
CD48P09326 RNA5SP335-201ENST00000363817 110 ntBASIC5.54□□□□□ -1.52
CD48P09326 APOA2-201ENST00000367990 474 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
CD48P09326 EFCAB9-201ENST00000398186 702 ntAPPRIS P1 TSL 3 BASIC5.54□□□□□ -1.52
CD48P09326 AL391422.1-201ENST00000402155 436 ntBASIC5.54□□□□□ -1.52
CD48P09326 RPL12P18-201ENST00000437175 325 ntBASIC5.54□□□□□ -1.52
CD48P09326 LINC02094-201ENST00000437646 520 ntTSL 2 BASIC5.54□□□□□ -1.52
CD48P09326 NOP56P2-201ENST00000447491 769 ntBASIC5.54□□□□□ -1.52
CD48P09326 AC104634.1-201ENST00000452720 462 ntBASIC5.54□□□□□ -1.52
CD48P09326 AC108161.1-201ENST00000461060 402 ntBASIC5.54□□□□□ -1.52
CD48P09326 RN7SL51P-201ENST00000468230 285 ntBASIC5.54□□□□□ -1.52
CD48P09326 TFDP2-211ENST00000479040 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC5.54□□□□□ -1.52
CD48P09326 AC063979.2-201ENST00000513767 958 ntTSL 5 BASIC5.54□□□□□ -1.52
CD48P09326 AP003086.3-201ENST00000527030 365 ntTSL 3 BASIC5.54□□□□□ -1.52
CD48P09326 AP003168.1-201ENST00000530091 307 ntBASIC5.54□□□□□ -1.52
CD48P09326 CCDC60-203ENST00000536742 886 ntAPPRIS ALT2 TSL 2 BASIC5.54□□□□□ -1.52
CD48P09326 SNRPGP1-201ENST00000553864 222 ntBASIC5.54□□□□□ -1.52
CD48P09326 AC015912.1-201ENST00000574826 538 ntTSL 3 BASIC5.54□□□□□ -1.52
CD48P09326 AP000897.2-201ENST00000579509 1057 ntTSL 3 BASIC5.54□□□□□ -1.52
CD48P09326 SNORD95-201ENST00000579879 68 ntBASIC5.54□□□□□ -1.52
CD48P09326 AL157938.2-202ENST00000588378 875 ntTSL 5 BASIC5.54□□□□□ -1.52
CD48P09326 STARD13-AS-208ENST00000589472 859 ntTSL 5 BASIC5.54□□□□□ -1.52
CD48P09326 Z98949.1-203ENST00000597284 851 ntTSL 5 BASIC5.54□□□□□ -1.52
CD48P09326 AL136164.2-201ENST00000602823 732 ntTSL 5 BASIC5.54□□□□□ -1.52
CD48P09326 MTCO1P1-201ENST00000624263 1081 ntBASIC5.54□□□□□ -1.52
CD48P09326 AC079298.1-201ENST00000625026 1619 ntBASIC5.54□□□□□ -1.52
CD48P09326 CTSV-203ENST00000538255 4322 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
CD48P09326 CDK15-204ENST00000450471 3659 ntAPPRIS ALT1 TSL 1 (best) BASIC5.54□□□□□ -1.52
CD48P09326 HAUS3-201ENST00000243706 5620 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
CD48P09326 AC006484.1-201ENST00000435086 1884 ntBASIC5.54□□□□□ -1.52
CD48P09326 DAZ4-205ENST00000440066 1891 ntTSL 5 BASIC5.54□□□□□ -1.52
CD48P09326 DAZ1-206ENST00000620725 1891 ntTSL 5 BASIC5.54□□□□□ -1.52
CD48P09326 SRSF11-201ENST00000370949 3034 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
CD48P09326 LRRC19-201ENST00000380055 3609 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
CD48P09326 ITGAV-204ENST00000433736 3288 ntAPPRIS ALT2 TSL 2 BASIC5.53□□□□□ -1.52
CD48P09326 GLYATL1-202ENST00000317391 1627 ntAPPRIS ALT2 TSL 1 (best) BASIC5.53□□□□□ -1.52
CD48P09326 AC091045.1-201ENST00000561460 2277 ntTSL 5 BASIC5.53□□□□□ -1.52
CD48P09326 LINC01206-204ENST00000482787 9580 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
CD48P09326 NUDT6-202ENST00000339154 1065 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
CD48P09326 OR1L6-202ENST00000373684 1044 ntBASIC5.53□□□□□ -1.52
CD48P09326 RNU1-77P-201ENST00000390868 162 ntBASIC5.53□□□□□ -1.52
CD48P09326 AC005323.2-201ENST00000399342 583 ntTSL 3 BASIC5.53□□□□□ -1.52
CD48P09326 MTND3P20-201ENST00000407663 186 ntBASIC5.53□□□□□ -1.52
CD48P09326 AC012499.1-201ENST00000412133 741 ntTSL 5 BASIC5.53□□□□□ -1.52
CD48P09326 HSPD1P12-201ENST00000429127 1069 ntBASIC5.53□□□□□ -1.52
CD48P09326 AC124944.2-201ENST00000429866 1242 ntBASIC5.53□□□□□ -1.52
CD48P09326 AC008269.1-201ENST00000438070 646 ntTSL 3 BASIC5.53□□□□□ -1.52
CD48P09326 LINC02038-201ENST00000439074 702 ntTSL 4 BASIC5.53□□□□□ -1.52
CD48P09326 FLJ27354-202ENST00000443562 770 ntTSL 3 BASIC5.53□□□□□ -1.52
CD48P09326 AC016772.1-201ENST00000444170 1261 ntBASIC5.53□□□□□ -1.52
CD48P09326 CBX1P2-201ENST00000453841 458 ntBASIC5.53□□□□□ -1.52
CD48P09326 AC100832.1-201ENST00000471945 383 ntBASIC5.53□□□□□ -1.52
CD48P09326 RPS12P31-201ENST00000491419 398 ntBASIC5.53□□□□□ -1.52
CD48P09326 RN7SL466P-201ENST00000497546 295 ntBASIC5.53□□□□□ -1.52
CD48P09326 AC024579.1-201ENST00000503685 371 ntTSL 5 BASIC5.53□□□□□ -1.52
CD48P09326 AC011389.1-203ENST00000513790 573 ntTSL 4 BASIC5.53□□□□□ -1.52
CD48P09326 TMEM97P2-201ENST00000517841 403 ntBASIC5.53□□□□□ -1.52
CD48P09326 AC068672.3-201ENST00000524017 824 ntTSL 3 BASIC5.53□□□□□ -1.52
CD48P09326 AC079414.1-201ENST00000563114 488 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
CD48P09326 AC006363.1-201ENST00000603806 463 ntBASIC5.53□□□□□ -1.52
CD48P09326 FAM72A-208ENST00000607379 1139 ntBASIC5.53□□□□□ -1.52
CD48P09326 AL359513.1-201ENST00000614364 557 ntBASIC5.53□□□□□ -1.52
CD48P09326 AC109583.2-201ENST00000617367 129 ntBASIC5.53□□□□□ -1.52
CD48P09326 AL109620.1-201ENST00000618738 1197 ntBASIC5.53□□□□□ -1.52
CD48P09326 AL691477.1-201ENST00000624398 162 ntBASIC5.53□□□□□ -1.52
CD48P09326 LINC01685-203ENST00000634464 1201 ntTSL 5 BASIC5.53□□□□□ -1.52
CD48P09326 LIMA1-203ENST00000547825 3920 ntAPPRIS ALT2 TSL 1 (best) BASIC5.53□□□□□ -1.52
CD48P09326 AC011755.1-201ENST00000623763 2049 ntBASIC5.53□□□□□ -1.52
CD48P09326 ERVW-1-201ENST00000493463 2925 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
CD48P09326 GTF2IRD2P1-202ENST00000618962 3055 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
CD48P09326 MIPEPP2-201ENST00000422560 1819 ntBASIC5.53□□□□□ -1.52
CD48P09326 ANK3-216ENST00000503366 5792 ntAPPRIS ALT2 TSL 2 BASIC5.53□□□□□ -1.52
CD48P09326 ZNF573-208ENST00000536220 2257 ntAPPRIS P1 TSL 3 BASIC5.53□□□□□ -1.52
CD48P09326 LIN7C-201ENST00000278193 4688 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
CD48P09326 FAM196B-201ENST00000377365 2999 ntAPPRIS P1 TSL 2 BASIC5.52□□□□□ -1.53
CD48P09326 LINC01923-203ENST00000456248 2528 ntTSL 2 BASIC5.52□□□□□ -1.53
CD48P09326 IQCM-206ENST00000636793 1900 ntAPPRIS P5 TSL 5 BASIC5.52□□□□□ -1.53
CD48P09326 OR8D4-201ENST00000321355 1331 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
CD48P09326 ZNF429-209ENST00000618549 1889 ntTSL 5 BASIC5.52□□□□□ -1.53
CD48P09326 TMLHE-AS1-201ENST00000433624 1702 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
CD48P09326 TJP1-209ENST00000545208 5007 ntAPPRIS ALT2 TSL 5 BASIC5.52□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 89.2 ms