Protein–RNA interactions for Protein: P07339

CTSD, Cathepsin D, humanhuman

Predicted RBP Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSDP07339 RN7SKP275-201ENST00000364626 301 ntBASIC4.43□□□□□ -1.7
CTSDP07339 RNA5SP131-201ENST00000365452 119 ntBASIC4.43□□□□□ -1.7
CTSDP07339 RPS3AP2-201ENST00000407190 754 ntBASIC4.43□□□□□ -1.7
CTSDP07339 AL451107.1-201ENST00000416310 408 ntTSL 2 BASIC4.43□□□□□ -1.7
CTSDP07339 LINC00701-201ENST00000418295 742 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
CTSDP07339 HAO2-IT1-201ENST00000419144 311 ntTSL 5 BASIC4.43□□□□□ -1.7
CTSDP07339 AL356056.1-206ENST00000424615 407 ntTSL 5 BASIC4.43□□□□□ -1.7
CTSDP07339 AC007283.1-201ENST00000434645 445 ntTSL 5 BASIC4.43□□□□□ -1.7
CTSDP07339 AC023481.1-201ENST00000435368 938 ntTSL 3 BASIC4.43□□□□□ -1.7
CTSDP07339 OR6D1P-201ENST00000436165 939 ntBASIC4.43□□□□□ -1.7
CTSDP07339 AL592494.1-201ENST00000437523 309 ntTSL 5 BASIC4.43□□□□□ -1.7
CTSDP07339 AL137186.1-201ENST00000440436 480 ntTSL 3 BASIC4.43□□□□□ -1.7
CTSDP07339 TAS2R39-201ENST00000446620 1017 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
CTSDP07339 BX842559.2-201ENST00000451418 605 ntBASIC4.43□□□□□ -1.7
CTSDP07339 OARD1-211ENST00000480585 829 ntTSL 3 BASIC4.43□□□□□ -1.7
CTSDP07339 PFN1P8-201ENST00000497012 543 ntBASIC4.43□□□□□ -1.7
CTSDP07339 B4GALNT2P1-201ENST00000508857 307 ntBASIC4.43□□□□□ -1.7
CTSDP07339 LINC02147-201ENST00000509367 807 ntTSL 2 BASIC4.43□□□□□ -1.7
CTSDP07339 Y_RNA.667-201ENST00000516212 107 ntBASIC4.43□□□□□ -1.7
CTSDP07339 RNA5SP438-201ENST00000516561 112 ntBASIC4.43□□□□□ -1.7
CTSDP07339 AP000424.2-201ENST00000523784 233 ntTSL 3 BASIC4.43□□□□□ -1.7
CTSDP07339 OR10D4P-201ENST00000525892 951 ntBASIC4.43□□□□□ -1.7
CTSDP07339 AC091231.1-201ENST00000558443 391 ntTSL 5 BASIC4.43□□□□□ -1.7
CTSDP07339 LINC00556-201ENST00000569603 412 ntBASIC4.43□□□□□ -1.7
CTSDP07339 AC015845.1-202ENST00000580184 242 ntTSL 3 BASIC4.43□□□□□ -1.7
CTSDP07339 AC090415.2-201ENST00000584078 374 ntTSL 3 BASIC4.43□□□□□ -1.7
CTSDP07339 ZNF66-203ENST00000594534 757 ntTSL 5 BASIC4.43□□□□□ -1.7
CTSDP07339 AL391425.1-202ENST00000617518 774 ntTSL 5 BASIC4.43□□□□□ -1.7
CTSDP07339 AC068631.1-223ENST00000625877 472 ntTSL 5 BASIC4.43□□□□□ -1.7
CTSDP07339 FOXP2-209ENST00000393498 2617 ntTSL 5 BASIC4.43□□□□□ -1.7
CTSDP07339 LINC02227-201ENST00000619068 3748 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
CTSDP07339 SEC31A-201ENST00000264405 3447 ntTSL 2 BASIC4.43□□□□□ -1.7
CTSDP07339 FANCD2-202ENST00000383807 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC4.43□□□□□ -1.7
CTSDP07339 PPP1R9A-207ENST00000433881 9928 ntAPPRIS P1 TSL 5 BASIC4.42□□□□□ -1.7
CTSDP07339 OR5AQ1P-203ENST00000641818 1529 ntBASIC4.42□□□□□ -1.7
CTSDP07339 CLEC1A-204ENST00000457018 1686 ntAPPRIS ALT2 TSL 2 BASIC4.42□□□□□ -1.7
CTSDP07339 RWDD2A-201ENST00000369724 3744 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
CTSDP07339 MRE11P1-201ENST00000464884 2127 ntBASIC4.42□□□□□ -1.7
CTSDP07339 SYT14-206ENST00000537238 5208 ntAPPRIS ALT2 TSL 5 BASIC4.42□□□□□ -1.7
CTSDP07339 MARCH1-202ENST00000339875 2476 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
CTSDP07339 AC005294.1-201ENST00000355509 281 ntBASIC4.42□□□□□ -1.7
CTSDP07339 OR6K2-201ENST00000359610 975 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
CTSDP07339 OR2J2-202ENST00000377167 1272 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
CTSDP07339 MIR589-201ENST00000385238 99 ntBASIC4.42□□□□□ -1.7
CTSDP07339 OTC-201ENST00000039007 1585 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
CTSDP07339 TRAJ4-201ENST00000390533 63 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
CTSDP07339 IL31RA-204ENST00000396834 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC4.42□□□□□ -1.7
CTSDP07339 LSM5-203ENST00000409782 649 ntTSL 5 BASIC4.42□□□□□ -1.7
CTSDP07339 RN7SKP16-201ENST00000410180 299 ntBASIC4.42□□□□□ -1.7
CTSDP07339 AC002524.1-201ENST00000411687 547 ntBASIC4.42□□□□□ -1.7
CTSDP07339 AL445213.1-201ENST00000412589 747 ntBASIC4.42□□□□□ -1.7
CTSDP07339 MOBP-203ENST00000415443 577 ntAPPRIS ALT2 TSL 4 BASIC4.42□□□□□ -1.7
CTSDP07339 MARK2P12-201ENST00000420129 585 ntBASIC4.42□□□□□ -1.7
CTSDP07339 AC066692.1-201ENST00000421721 457 ntBASIC4.42□□□□□ -1.7
CTSDP07339 NPM1P22-201ENST00000427761 952 ntBASIC4.42□□□□□ -1.7
CTSDP07339 AC009227.2-201ENST00000432599 511 ntTSL 3 BASIC4.42□□□□□ -1.7
CTSDP07339 NOP56P2-201ENST00000447491 769 ntBASIC4.42□□□□□ -1.7
CTSDP07339 AC003991.1-205ENST00000447758 625 ntTSL 5 BASIC4.42□□□□□ -1.7
CTSDP07339 PCGEM1-201ENST00000454040 1590 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
CTSDP07339 TPT1P1-201ENST00000458495 518 ntBASIC4.42□□□□□ -1.7
CTSDP07339 RN7SL591P-201ENST00000496150 292 ntBASIC4.42□□□□□ -1.7
CTSDP07339 FGB-207ENST00000509493 1164 ntTSL 5 BASIC4.42□□□□□ -1.7
CTSDP07339 AC008592.4-201ENST00000509999 450 ntTSL 3 BASIC4.42□□□□□ -1.7
CTSDP07339 AC114781.3-201ENST00000512083 142 ntBASIC4.42□□□□□ -1.7
CTSDP07339 AP001961.1-201ENST00000515782 526 ntTSL 3 BASIC4.42□□□□□ -1.7
CTSDP07339 DDHD2-202ENST00000517385 4113 ntTSL 2 BASIC4.42□□□□□ -1.7
CTSDP07339 LINC02553-201ENST00000529088 734 ntTSL 5 BASIC4.42□□□□□ -1.7
CTSDP07339 AC005363.1-201ENST00000530779 351 ntBASIC4.42□□□□□ -1.7
CTSDP07339 AC079075.2-201ENST00000557964 449 ntTSL 4 BASIC4.42□□□□□ -1.7
CTSDP07339 AC018558.1-201ENST00000562591 459 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
CTSDP07339 AC092121.1-201ENST00000569452 202 ntBASIC4.42□□□□□ -1.7
CTSDP07339 RN7SL435P-201ENST00000584418 282 ntBASIC4.42□□□□□ -1.7
CTSDP07339 AC004596.1-201ENST00000586560 528 ntTSL 3 BASIC4.42□□□□□ -1.7
CTSDP07339 AC011626.1-201ENST00000604710 562 ntBASIC4.42□□□□□ -1.7
CTSDP07339 AC018695.5-201ENST00000605872 315 ntBASIC4.42□□□□□ -1.7
CTSDP07339 AC037198.3-201ENST00000616754 526 ntBASIC4.42□□□□□ -1.7
CTSDP07339 RN7SL544P-201ENST00000617232 284 ntBASIC4.42□□□□□ -1.7
CTSDP07339 RN7SL763P-201ENST00000620922 284 ntBASIC4.42□□□□□ -1.7
CTSDP07339 WDHD1-201ENST00000360586 5996 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
CTSDP07339 RANBP3L-201ENST00000296604 3104 ntAPPRIS P3 TSL 1 (best) BASIC4.42□□□□□ -1.7
CTSDP07339 PDE10A-201ENST00000366882 8233 ntAPPRIS P3 TSL 5 BASIC4.42□□□□□ -1.7
CTSDP07339 FILIP1-202ENST00000370020 4051 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
CTSDP07339 SMC2-AS1-201ENST00000603487 7020 ntTSL 2 BASIC4.42□□□□□ -1.7
CTSDP07339 CD47-201ENST00000355354 5020 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
CTSDP07339 MED23-203ENST00000368058 4576 ntTSL 5 BASIC4.42□□□□□ -1.7
CTSDP07339 AL672167.1-204ENST00000641875 3017 ntBASIC4.42□□□□□ -1.7
CTSDP07339 ZNF652P1-201ENST00000442420 1309 ntBASIC4.42□□□□□ -1.7
CTSDP07339 UGT2A1-203ENST00000503640 2595 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
CTSDP07339 STX3-208ENST00000641815 3236 ntBASIC4.42□□□□□ -1.7
CTSDP07339 EPPIN-202ENST00000354280 1987 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
CTSDP07339 IFIT1B-201ENST00000371809 1972 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
CTSDP07339 PUS10-203ENST00000407787 1820 ntAPPRIS P1 TSL 2 BASIC4.42□□□□□ -1.7
CTSDP07339 FGG-201ENST00000336098 1659 ntTSL 2 BASIC4.41□□□□□ -1.7
CTSDP07339 C2orf66-201ENST00000342506 1669 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
CTSDP07339 AL022393.1-201ENST00000625142 1677 ntBASIC4.41□□□□□ -1.7
CTSDP07339 AC006210.2-201ENST00000367074 1545 ntBASIC4.41□□□□□ -1.7
CTSDP07339 PTPRD-203ENST00000381196 9911 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
CTSDP07339 FNIP1-202ENST00000307968 6388 ntAPPRIS ALT2 TSL 5 BASIC4.41□□□□□ -1.7
CTSDP07339 R3HCC1L-202ENST00000314594 3198 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
CTSDP07339 CDC23-202ENST00000394886 3155 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 93.5 ms