Protein–RNA interactions for Protein: P06340

HLA-DOA, HLA class II histocompatibility antigen, DO alpha chain, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOAP06340 AC008517.1-201ENST00000502383 585 ntTSL 4 BASIC6.61□□□□□ -1.35
HLA-DOAP06340 AC091917.1-201ENST00000506330 566 ntTSL 4 BASIC6.61□□□□□ -1.35
HLA-DOAP06340 AC018709.1-201ENST00000509111 700 ntAPPRIS P1 TSL 3 BASIC6.61□□□□□ -1.35
HLA-DOAP06340 AC006296.1-201ENST00000514401 591 ntTSL 2 BASIC6.61□□□□□ -1.35
HLA-DOAP06340 PMS2P3-207ENST00000529061 717 ntBASIC6.61□□□□□ -1.35
HLA-DOAP06340 AC007527.1-201ENST00000535528 313 ntTSL 2 BASIC6.61□□□□□ -1.35
HLA-DOAP06340 HNF1A-AS1-203ENST00000537361 659 ntTSL 3 BASIC6.61□□□□□ -1.35
HLA-DOAP06340 AL049779.2-201ENST00000553847 315 ntBASIC6.61□□□□□ -1.35
HLA-DOAP06340 AC025580.2-202ENST00000558536 715 ntTSL 3 BASIC6.61□□□□□ -1.35
HLA-DOAP06340 BLOC1S6-209ENST00000565409 616 ntTSL 4 BASIC6.61□□□□□ -1.35
HLA-DOAP06340 AC104984.2-201ENST00000582938 385 ntTSL 3 BASIC6.61□□□□□ -1.35
HLA-DOAP06340 FAM26D-205ENST00000628083 1117 ntTSL 2 BASIC6.61□□□□□ -1.35
HLA-DOAP06340 LINC01685-203ENST00000634464 1201 ntTSL 5 BASIC6.61□□□□□ -1.35
HLA-DOAP06340 SRSF11-202ENST00000370950 3784 ntAPPRIS P3 TSL 1 (best) BASIC6.61□□□□□ -1.35
HLA-DOAP06340 GTPBP10-201ENST00000222511 7531 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
HLA-DOAP06340 PHACTR4-201ENST00000373836 3107 ntAPPRIS P4 TSL 5 BASIC6.61□□□□□ -1.35
HLA-DOAP06340 ELAVL4-202ENST00000371819 2467 ntAPPRIS ALT1 TSL 2 BASIC6.61□□□□□ -1.35
HLA-DOAP06340 TLR10-208ENST00000622002 3673 ntAPPRIS P1 TSL 3 BASIC6.61□□□□□ -1.35
HLA-DOAP06340 PABPC1P6-201ENST00000445594 1829 ntBASIC6.61□□□□□ -1.35
HLA-DOAP06340 SELE-204ENST00000367776 3576 ntTSL 5 BASIC6.61□□□□□ -1.35
HLA-DOAP06340 SELE-205ENST00000367777 3576 ntTSL 5 BASIC6.61□□□□□ -1.35
HLA-DOAP06340 PCGF5-201ENST00000336126 7018 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
HLA-DOAP06340 DDX1-208ENST00000621973 2183 ntTSL 5 BASIC6.61□□□□□ -1.35
HLA-DOAP06340 FBXW12-201ENST00000296438 1647 ntAPPRIS P3 TSL 1 (best) BASIC6.61□□□□□ -1.35
HLA-DOAP06340 MT-RNR2-201ENST00000387347 1559 ntBASIC6.61□□□□□ -1.35
HLA-DOAP06340 FHL5-201ENST00000326771 2031 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
HLA-DOAP06340 AL138820.1-201ENST00000617901 5305 ntBASIC6.6□□□□□ -1.35
HLA-DOAP06340 ZNF337-AS1-201ENST00000414393 4666 ntTSL 2 BASIC6.6□□□□□ -1.35
HLA-DOAP06340 HNMT-203ENST00000329366 835 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
HLA-DOAP06340 FIGN-202ENST00000409634 746 ntTSL 5 BASIC6.6□□□□□ -1.35
HLA-DOAP06340 RNF10P1-201ENST00000418589 369 ntBASIC6.6□□□□□ -1.35
HLA-DOAP06340 G6PC2-203ENST00000421979 494 ntTSL 3 BASIC6.6□□□□□ -1.35
HLA-DOAP06340 AL021408.1-201ENST00000430428 552 ntTSL 4 BASIC6.6□□□□□ -1.35
HLA-DOAP06340 AC106053.1-201ENST00000431697 368 ntTSL 3 BASIC6.6□□□□□ -1.35
HLA-DOAP06340 AL109807.1-201ENST00000438222 569 ntTSL 3 BASIC6.6□□□□□ -1.35
HLA-DOAP06340 RPL31P53-201ENST00000457065 348 ntBASIC6.6□□□□□ -1.35
HLA-DOAP06340 AC024558.1-201ENST00000505008 528 ntBASIC6.6□□□□□ -1.35
HLA-DOAP06340 AC006499.3-201ENST00000506077 748 ntBASIC6.6□□□□□ -1.35
HLA-DOAP06340 CDC42P3-201ENST00000518493 633 ntBASIC6.6□□□□□ -1.35
HLA-DOAP06340 AC246817.2-206ENST00000520570 582 ntTSL 4 BASIC6.6□□□□□ -1.35
HLA-DOAP06340 AC131254.2-201ENST00000521908 550 ntTSL 3 BASIC6.6□□□□□ -1.35
HLA-DOAP06340 AP003386.1-201ENST00000526509 504 ntTSL 3 BASIC6.6□□□□□ -1.35
HLA-DOAP06340 AC008056.2-201ENST00000553812 551 ntTSL 5 BASIC6.6□□□□□ -1.35
HLA-DOAP06340 DHFRP1-201ENST00000579682 559 ntBASIC6.6□□□□□ -1.35
HLA-DOAP06340 AC015845.1-202ENST00000580184 242 ntTSL 3 BASIC6.6□□□□□ -1.35
HLA-DOAP06340 AC006116.7-201ENST00000590141 756 ntBASIC6.6□□□□□ -1.35
HLA-DOAP06340 AC005702.2-201ENST00000591035 481 ntAPPRIS P1 TSL 3 BASIC6.6□□□□□ -1.35
HLA-DOAP06340 SMIM24-204ENST00000591708 660 ntAPPRIS ALT2 TSL 2 BASIC6.6□□□□□ -1.35
HLA-DOAP06340 AC000068.2-201ENST00000608816 460 ntBASIC6.6□□□□□ -1.35
HLA-DOAP06340 AL356608.1-201ENST00000610034 820 ntBASIC6.6□□□□□ -1.35
HLA-DOAP06340 AC087683.2-201ENST00000611384 326 ntBASIC6.6□□□□□ -1.35
HLA-DOAP06340 C8orf89-202ENST00000624510 658 ntAPPRIS P2 TSL 3 BASIC6.6□□□□□ -1.35
HLA-DOAP06340 FP236241.1-201ENST00000623374 7632 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
HLA-DOAP06340 CU633967.1-211ENST00000624444 7628 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
HLA-DOAP06340 AC107980.1-201ENST00000558671 3355 ntBASIC6.6□□□□□ -1.35
HLA-DOAP06340 NBPF9-203ENST00000610300 2930 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
HLA-DOAP06340 MAGI2-205ENST00000519748 3316 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
HLA-DOAP06340 CEACAM5-202ENST00000398599 2451 ntAPPRIS ALT2 TSL 5 BASIC6.6□□□□□ -1.35
HLA-DOAP06340 ATP5A1P4-201ENST00000556888 1605 ntBASIC6.6□□□□□ -1.35
HLA-DOAP06340 MAPK10-366ENST00000641903 2812 ntAPPRIS ALT1 BASIC6.6□□□□□ -1.35
HLA-DOAP06340 INPP4B-214ENST00000508116 3165 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
HLA-DOAP06340 TRPC4-202ENST00000355779 2784 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
HLA-DOAP06340 TRPC4-204ENST00000379673 2760 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
HLA-DOAP06340 ZNF300P1-202ENST00000520773 3115 ntTSL 5 BASIC6.6□□□□□ -1.35
HLA-DOAP06340 LEPROT-206ENST00000613538 4625 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
HLA-DOAP06340 MUC17-201ENST00000306151 14247 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
HLA-DOAP06340 C4BPAP1-201ENST00000415474 1893 ntBASIC6.6□□□□□ -1.35
HLA-DOAP06340 DAZ2-204ENST00000382431 3637 ntAPPRIS ALT2 TSL 1 (best) BASIC6.59□□□□□ -1.35
HLA-DOAP06340 ADH4-207ENST00000505590 1400 ntTSL 5 BASIC6.59□□□□□ -1.35
HLA-DOAP06340 MGP-203ENST00000539261 1405 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
HLA-DOAP06340 ECT2L-203ENST00000423192 4319 ntAPPRIS P1 TSL 5 BASIC6.59□□□□□ -1.35
HLA-DOAP06340 OR10G4-202ENST00000641521 3623 ntAPPRIS P1 BASIC6.59□□□□□ -1.35
HLA-DOAP06340 DSPP-201ENST00000282478 4281 ntAPPRIS P1 TSL 5 BASIC6.59□□□□□ -1.35
HLA-DOAP06340 KANTR-203ENST00000604062 4251 ntAPPRIS P1 TSL 5 BASIC6.59□□□□□ -1.35
HLA-DOAP06340 GPR87-201ENST00000260843 1608 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
HLA-DOAP06340 TAS2R8-201ENST00000240615 1243 ntAPPRIS P1 BASIC6.59□□□□□ -1.35
HLA-DOAP06340 RNU6-670P-201ENST00000364312 104 ntBASIC6.59□□□□□ -1.35
HLA-DOAP06340 RNU1-59P-201ENST00000364829 162 ntBASIC6.59□□□□□ -1.35
HLA-DOAP06340 SLC35E1P1-201ENST00000419313 864 ntBASIC6.59□□□□□ -1.35
HLA-DOAP06340 MAGI2-AS3-204ENST00000426835 738 ntTSL 3 BASIC6.59□□□□□ -1.35
HLA-DOAP06340 HMGB3P5-201ENST00000428894 612 ntBASIC6.59□□□□□ -1.35
HLA-DOAP06340 LINC00380-201ENST00000442478 353 ntTSL 2 BASIC6.59□□□□□ -1.35
HLA-DOAP06340 MTND5P8-201ENST00000449817 1083 ntBASIC6.59□□□□□ -1.35
HLA-DOAP06340 RN7SL447P-201ENST00000494711 245 ntBASIC6.59□□□□□ -1.35
HLA-DOAP06340 PANCR-201ENST00000503456 493 ntTSL 5 BASIC6.59□□□□□ -1.35
HLA-DOAP06340 HIGD1AP14-201ENST00000507617 282 ntBASIC6.59□□□□□ -1.35
HLA-DOAP06340 RNU6-760P-201ENST00000516078 97 ntBASIC6.59□□□□□ -1.35
HLA-DOAP06340 AC100802.1-201ENST00000519197 1026 ntTSL 3 BASIC6.59□□□□□ -1.35
HLA-DOAP06340 AC015522.1-201ENST00000523678 640 ntTSL 3 BASIC6.59□□□□□ -1.35
HLA-DOAP06340 AC090888.2-201ENST00000559765 1144 ntBASIC6.59□□□□□ -1.35
HLA-DOAP06340 AC021351.1-202ENST00000561394 701 ntTSL 3 BASIC6.59□□□□□ -1.35
HLA-DOAP06340 MIR762HG-201ENST00000564901 648 ntTSL 2 BASIC6.59□□□□□ -1.35
HLA-DOAP06340 AC009019.1-203ENST00000568603 515 ntTSL 5 BASIC6.59□□□□□ -1.35
HLA-DOAP06340 H3F3BP2-201ENST00000583907 357 ntBASIC6.59□□□□□ -1.35
HLA-DOAP06340 TTN-AS1-219ENST00000586707 834 ntTSL 5 BASIC6.59□□□□□ -1.35
HLA-DOAP06340 AC006504.5-212ENST00000587188 746 ntTSL 3 BASIC6.59□□□□□ -1.35
HLA-DOAP06340 AC091057.3-201ENST00000602684 733 ntBASIC6.59□□□□□ -1.35
HLA-DOAP06340 PACRG-210ENST00000611387 279 ntTSL 5 BASIC6.59□□□□□ -1.35
HLA-DOAP06340 AC084782.3-201ENST00000612282 578 ntBASIC6.59□□□□□ -1.35
HLA-DOAP06340 U1.25-201ENST00000614085 162 ntBASIC6.59□□□□□ -1.35
Retrieved 100 of 98,524 protein–RNA pairs in 94.4 ms