Protein–RNA interactions for Protein: O95398

RAPGEF3, Rap guanine nucleotide exchange factor 3, humanhuman

Predictions only

Length 923 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3O95398 RPL36AP15-201ENST00000444514 266 ntBASIC8.14□□□□□ -1.11
RAPGEF3O95398 TMEM246-AS1-204ENST00000450109 538 ntTSL 3 BASIC8.14□□□□□ -1.11
RAPGEF3O95398 OR6C72P-201ENST00000451403 892 ntBASIC8.14□□□□□ -1.11
RAPGEF3O95398 HRAT17-202ENST00000451962 687 ntTSL 5 BASIC8.14□□□□□ -1.11
RAPGEF3O95398 AC104634.1-201ENST00000452720 462 ntBASIC8.14□□□□□ -1.11
RAPGEF3O95398 LINC01995-201ENST00000489016 621 ntTSL 3 BASIC8.14□□□□□ -1.11
RAPGEF3O95398 KRTAP5-14P-201ENST00000502328 121 ntBASIC8.14□□□□□ -1.11
RAPGEF3O95398 AC078899.1-201ENST00000521432 1185 ntBASIC8.14□□□□□ -1.11
RAPGEF3O95398 OR11H7-201ENST00000553765 945 ntAPPRIS P1 BASIC8.14□□□□□ -1.11
RAPGEF3O95398 PARP1P2-201ENST00000556806 195 ntBASIC8.14□□□□□ -1.11
RAPGEF3O95398 AC012414.2-201ENST00000559474 187 ntBASIC8.14□□□□□ -1.11
RAPGEF3O95398 AC018558.5-201ENST00000565840 952 ntBASIC8.14□□□□□ -1.11
RAPGEF3O95398 AC068112.1-201ENST00000580057 346 ntTSL 3 BASIC8.14□□□□□ -1.11
RAPGEF3O95398 ABHD15-AS1-201ENST00000581474 187 ntTSL 5 BASIC8.14□□□□□ -1.11
RAPGEF3O95398 MIR5096-201ENST00000583713 70 ntBASIC8.14□□□□□ -1.11
RAPGEF3O95398 AC091193.1-201ENST00000604640 448 ntBASIC8.14□□□□□ -1.11
RAPGEF3O95398 AC009597.2-201ENST00000604659 592 ntBASIC8.14□□□□□ -1.11
RAPGEF3O95398 AL355816.2-201ENST00000610049 647 ntBASIC8.14□□□□□ -1.11
RAPGEF3O95398 AC084824.5-201ENST00000612009 413 ntBASIC8.14□□□□□ -1.11
RAPGEF3O95398 AL512506.1-201ENST00000613918 449 ntBASIC8.14□□□□□ -1.11
RAPGEF3O95398 AL596218.1-201ENST00000634239 1140 ntTSL 5 BASIC8.14□□□□□ -1.11
RAPGEF3O95398 AL589993.1-201ENST00000407450 2524 ntBASIC8.14□□□□□ -1.11
RAPGEF3O95398 LARP1B-201ENST00000326639 4891 ntAPPRIS P1 TSL 5 BASIC8.14□□□□□ -1.11
RAPGEF3O95398 OSGEPL1-207ENST00000522700 1779 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
RAPGEF3O95398 GPR85-202ENST00000424100 2895 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
RAPGEF3O95398 AC099506.1-201ENST00000567359 4037 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
RAPGEF3O95398 GAGE1-204ENST00000619375 2873 ntAPPRIS P1 TSL 5 BASIC8.14□□□□□ -1.11
RAPGEF3O95398 RMST-210ENST00000640149 2844 ntTSL 5 BASIC8.14□□□□□ -1.11
RAPGEF3O95398 SIAH1-202ENST00000380006 3352 ntAPPRIS P3 BASIC8.14□□□□□ -1.11
RAPGEF3O95398 RABGEF1-202ENST00000380828 3864 ntTSL 2 BASIC8.14□□□□□ -1.11
RAPGEF3O95398 AL136985.3-202ENST00000636386 2708 ntTSL 5 BASIC8.14□□□□□ -1.11
RAPGEF3O95398 AC019197.1-202ENST00000414885 2639 ntTSL 5 BASIC8.14□□□□□ -1.11
RAPGEF3O95398 POLQ-204ENST00000621776 9055 ntTSL 5 BASIC8.13□□□□□ -1.11
RAPGEF3O95398 RUBCNL-205ENST00000389908 3956 ntAPPRIS P3 TSL 2 BASIC8.13□□□□□ -1.11
RAPGEF3O95398 LINC01043-201ENST00000565936 6897 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
RAPGEF3O95398 MYBPC1-216ENST00000550270 3426 ntAPPRIS ALT2 TSL 5 BASIC8.13□□□□□ -1.11
RAPGEF3O95398 RIMKLB-207ENST00000538135 5392 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
RAPGEF3O95398 CSPP1-201ENST00000262210 4367 ntAPPRIS P3 TSL 1 (best) BASIC8.13□□□□□ -1.11
RAPGEF3O95398 AC098798.1-201ENST00000503998 1447 ntTSL 5 BASIC8.13□□□□□ -1.11
RAPGEF3O95398 ALG13-202ENST00000371979 2770 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
RAPGEF3O95398 LIMCH1-201ENST00000313860 6165 ntAPPRIS P3 TSL 1 (best) BASIC8.13□□□□□ -1.11
RAPGEF3O95398 CALU-203ENST00000479257 2572 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
RAPGEF3O95398 Y_RNA.62-201ENST00000362840 99 ntBASIC8.13□□□□□ -1.11
RAPGEF3O95398 SNORD8-201ENST00000363915 110 ntBASIC8.13□□□□□ -1.11
RAPGEF3O95398 RN7SKP27-201ENST00000410684 333 ntBASIC8.13□□□□□ -1.11
RAPGEF3O95398 RPL18P10-201ENST00000425606 538 ntBASIC8.13□□□□□ -1.11
RAPGEF3O95398 AC026316.2-201ENST00000473110 263 ntTSL 3 BASIC8.13□□□□□ -1.11
RAPGEF3O95398 AC093720.1-201ENST00000505681 714 ntBASIC8.13□□□□□ -1.11
RAPGEF3O95398 GTF2IP11-201ENST00000526931 420 ntBASIC8.13□□□□□ -1.11
RAPGEF3O95398 MFAP5-205ENST00000535336 566 ntTSL 4 BASIC8.13□□□□□ -1.11
RAPGEF3O95398 UBE2FP2-201ENST00000566646 462 ntBASIC8.13□□□□□ -1.11
RAPGEF3O95398 NUFIP2-202ENST00000579665 559 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
RAPGEF3O95398 AP005433.1-201ENST00000582939 620 ntTSL 2 BASIC8.13□□□□□ -1.11
RAPGEF3O95398 BNIP3P27-201ENST00000599991 412 ntBASIC8.13□□□□□ -1.11
RAPGEF3O95398 AC011458.1-201ENST00000604034 617 ntBASIC8.13□□□□□ -1.11
RAPGEF3O95398 AC243654.3-201ENST00000617427 735 ntTSL 5 BASIC8.13□□□□□ -1.11
RAPGEF3O95398 AC093495.1-217ENST00000627385 428 ntTSL 5 BASIC8.13□□□□□ -1.11
RAPGEF3O95398 CASC22-202ENST00000628396 802 ntTSL 5 BASIC8.13□□□□□ -1.11
RAPGEF3O95398 AC068870.1-201ENST00000563737 2455 ntBASIC8.13□□□□□ -1.11
RAPGEF3O95398 AL078621.3-201ENST00000623707 2042 ntBASIC8.13□□□□□ -1.11
RAPGEF3O95398 C5orf64-203ENST00000505642 2970 ntTSL 2 BASIC8.13□□□□□ -1.11
RAPGEF3O95398 FSCB-201ENST00000340446 2938 ntAPPRIS P1 BASIC8.13□□□□□ -1.11
RAPGEF3O95398 Z98755.1-201ENST00000407015 1384 ntBASIC8.12□□□□□ -1.11
RAPGEF3O95398 DDX4-202ENST00000354991 2324 ntTSL 5 BASIC8.12□□□□□ -1.11
RAPGEF3O95398 CTNND1-236ENST00000533667 4990 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
RAPGEF3O95398 ASAH2-203ENST00000443575 1942 ntTSL 5 BASIC8.12□□□□□ -1.11
RAPGEF3O95398 CCL20-201ENST00000358813 800 ntAPPRIS P3 TSL 1 (best) BASIC8.12□□□□□ -1.11
RAPGEF3O95398 RNA5SP326-201ENST00000363209 110 ntBASIC8.12□□□□□ -1.11
RAPGEF3O95398 TMLHE-202ENST00000369439 1248 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
RAPGEF3O95398 TRAV12-2-201ENST00000390437 445 ntAPPRIS P1 BASIC8.12□□□□□ -1.11
RAPGEF3O95398 RNU2-50P-201ENST00000410494 143 ntBASIC8.12□□□□□ -1.11
RAPGEF3O95398 TMA16P2-201ENST00000413187 601 ntBASIC8.12□□□□□ -1.11
RAPGEF3O95398 OR52Y1P-201ENST00000452418 828 ntBASIC8.12□□□□□ -1.11
RAPGEF3O95398 AC115618.2-201ENST00000453810 450 ntTSL 3 BASIC8.12□□□□□ -1.11
RAPGEF3O95398 OSTCP1-201ENST00000455507 450 ntBASIC8.12□□□□□ -1.11
RAPGEF3O95398 RN7SL817P-201ENST00000480777 288 ntBASIC8.12□□□□□ -1.11
RAPGEF3O95398 YWHABP2-201ENST00000540201 713 ntBASIC8.12□□□□□ -1.11
RAPGEF3O95398 AC018767.1-201ENST00000566236 405 ntTSL 3 BASIC8.12□□□□□ -1.11
RAPGEF3O95398 AC005341.1-201ENST00000571086 708 ntBASIC8.12□□□□□ -1.11
RAPGEF3O95398 DNAJC19P3-201ENST00000594491 331 ntBASIC8.12□□□□□ -1.11
RAPGEF3O95398 RPL26P30-202ENST00000602923 645 ntBASIC8.12□□□□□ -1.11
RAPGEF3O95398 AC017076.1-201ENST00000607613 578 ntBASIC8.12□□□□□ -1.11
RAPGEF3O95398 AL356752.1-201ENST00000615844 593 ntBASIC8.12□□□□□ -1.11
RAPGEF3O95398 NAA60-237ENST00000615865 326 ntTSL 5 BASIC8.12□□□□□ -1.11
RAPGEF3O95398 LINC00836-203ENST00000628620 1179 ntTSL 5 BASIC8.12□□□□□ -1.11
RAPGEF3O95398 AC002384.2-201ENST00000636036 790 ntTSL 3 BASIC8.12□□□□□ -1.11
RAPGEF3O95398 FAM205BP-203ENST00000455647 3752 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
RAPGEF3O95398 AP1M1-201ENST00000291439 13193 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
RAPGEF3O95398 ANK3-216ENST00000503366 5792 ntAPPRIS ALT2 TSL 2 BASIC8.12□□□□□ -1.11
RAPGEF3O95398 ITPR1-205ENST00000456211 9717 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
RAPGEF3O95398 HYAL4-201ENST00000223026 2407 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
RAPGEF3O95398 AC068389.1-202ENST00000526470 3564 ntTSL 2 BASIC8.12□□□□□ -1.11
RAPGEF3O95398 TMOD2-201ENST00000249700 9191 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
RAPGEF3O95398 TRIP11-201ENST00000267622 9996 ntAPPRIS P2 TSL 1 (best) BASIC8.12□□□□□ -1.11
RAPGEF3O95398 CLIP1-AS1-201ENST00000535976 1745 ntTSL 3 BASIC8.12□□□□□ -1.11
RAPGEF3O95398 LRRC37A16P-202ENST00000586022 3725 ntBASIC8.12□□□□□ -1.11
RAPGEF3O95398 ZNF208-201ENST00000397126 3992 ntAPPRIS P1 TSL 3 BASIC8.12□□□□□ -1.11
RAPGEF3O95398 MAK-202ENST00000354489 3941 ntTSL 5 BASIC8.11□□□□□ -1.11
RAPGEF3O95398 LRRC37B-204ENST00000543378 3091 ntAPPRIS ALT2 TSL 2 BASIC8.11□□□□□ -1.11
RAPGEF3O95398 KIF27-202ENST00000334204 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC8.11□□□□□ -1.11
Retrieved 100 of 98,524 protein–RNA pairs in 127.6 ms