Protein–RNA interactions for Protein: H3BT56

CHKB-CPT1B, CHKB-CPT1B readthrough (NMD candidate) (Fragment), humanhuman

Predictions only

Length 60 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-CPT1BH3BT56 AP000281.1-201ENST00000444036 316 ntBASIC2.84□□□□□ -1.95
CHKB-CPT1BH3BT56 MTND4LP12-201ENST00000448237 295 ntBASIC2.84□□□□□ -1.95
CHKB-CPT1BH3BT56 HIST1H2APS6-201ENST00000448609 364 ntBASIC2.84□□□□□ -1.95
CHKB-CPT1BH3BT56 AC013733.1-201ENST00000449835 985 ntTSL 4 BASIC2.84□□□□□ -1.95
CHKB-CPT1BH3BT56 AL451050.1-201ENST00000450126 415 ntBASIC2.84□□□□□ -1.95
CHKB-CPT1BH3BT56 HBBP1-202ENST00000454892 455 ntTSL 2 BASIC2.84□□□□□ -1.95
CHKB-CPT1BH3BT56 AC246785.3-201ENST00000455105 314 ntTSL 5 BASIC2.84□□□□□ -1.95
CHKB-CPT1BH3BT56 AL133477.1-201ENST00000457472 514 ntBASIC2.84□□□□□ -1.95
CHKB-CPT1BH3BT56 RN7SL647P-201ENST00000485429 300 ntBASIC2.84□□□□□ -1.95
CHKB-CPT1BH3BT56 RN7SL205P-201ENST00000490174 284 ntBASIC2.84□□□□□ -1.95
CHKB-CPT1BH3BT56 LINC00518-204ENST00000491317 1228 ntTSL 2 BASIC2.84□□□□□ -1.95
CHKB-CPT1BH3BT56 EIF4E-204ENST00000504432 1132 ntTSL 5 BASIC2.84□□□□□ -1.95
CHKB-CPT1BH3BT56 AL592156.1-201ENST00000508758 304 ntBASIC2.84□□□□□ -1.95
CHKB-CPT1BH3BT56 B4GALNT2P1-201ENST00000508857 307 ntBASIC2.84□□□□□ -1.95
CHKB-CPT1BH3BT56 LIAS-205ENST00000509519 1005 ntTSL 2 BASIC2.84□□□□□ -1.95
CHKB-CPT1BH3BT56 OR51K1P-201ENST00000510214 950 ntBASIC2.84□□□□□ -1.95
CHKB-CPT1BH3BT56 AC074255.1-201ENST00000511259 501 ntBASIC2.84□□□□□ -1.95
CHKB-CPT1BH3BT56 AC091912.1-201ENST00000511351 248 ntBASIC2.84□□□□□ -1.95
CHKB-CPT1BH3BT56 LINC02162-201ENST00000512521 574 ntTSL 4 BASIC2.84□□□□□ -1.95
CHKB-CPT1BH3BT56 LINC02465-204ENST00000514892 481 ntTSL 2 BASIC2.84□□□□□ -1.95
CHKB-CPT1BH3BT56 AC093878.1-201ENST00000515630 432 ntBASIC2.84□□□□□ -1.95
CHKB-CPT1BH3BT56 WARSP1-201ENST00000533936 454 ntBASIC2.84□□□□□ -1.95
CHKB-CPT1BH3BT56 AC008013.2-201ENST00000537555 348 ntTSL 5 BASIC2.84□□□□□ -1.95
CHKB-CPT1BH3BT56 RFPL1S-203ENST00000539579 330 ntBASIC2.84□□□□□ -1.95
CHKB-CPT1BH3BT56 TRDN-204ENST00000542443 1294 ntTSL 1 (best) BASIC2.84□□□□□ -1.95
CHKB-CPT1BH3BT56 AL591770.1-201ENST00000554475 1131 ntTSL 3 BASIC2.84□□□□□ -1.95
CHKB-CPT1BH3BT56 AC007424.1-203ENST00000554613 687 ntBASIC2.84□□□□□ -1.95
CHKB-CPT1BH3BT56 AC090515.3-201ENST00000560431 315 ntBASIC2.84□□□□□ -1.95
CHKB-CPT1BH3BT56 HNRNPA1P74-201ENST00000560782 835 ntBASIC2.84□□□□□ -1.95
CHKB-CPT1BH3BT56 PDE6G-203ENST00000571224 526 ntAPPRIS P1 TSL 5 BASIC2.84□□□□□ -1.95
CHKB-CPT1BH3BT56 AC133552.4-201ENST00000576103 676 ntBASIC2.84□□□□□ -1.95
CHKB-CPT1BH3BT56 AC024614.1-201ENST00000577546 307 ntBASIC2.84□□□□□ -1.95
CHKB-CPT1BH3BT56 WDR45BP1-201ENST00000583470 1029 ntBASIC2.84□□□□□ -1.95
CHKB-CPT1BH3BT56 AC091132.1-201ENST00000588189 547 ntTSL 5 BASIC2.84□□□□□ -1.95
CHKB-CPT1BH3BT56 AC006305.2-201ENST00000589617 552 ntTSL 4 BASIC2.84□□□□□ -1.95
CHKB-CPT1BH3BT56 ZEB2-AS1-206ENST00000602006 572 ntTSL 5 BASIC2.84□□□□□ -1.95
CHKB-CPT1BH3BT56 SMR3B-204ENST00000614072 783 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.95
CHKB-CPT1BH3BT56 AC096861.1-201ENST00000616652 240 ntBASIC2.84□□□□□ -1.95
CHKB-CPT1BH3BT56 RAB28P4-201ENST00000622233 665 ntBASIC2.84□□□□□ -1.95
CHKB-CPT1BH3BT56 AL137789.1-204ENST00000623503 666 ntTSL 5 BASIC2.84□□□□□ -1.95
CHKB-CPT1BH3BT56 AC027559.1-201ENST00000636288 271 ntBASIC2.84□□□□□ -1.95
CHKB-CPT1BH3BT56 AC022167.5-202ENST00000637237 701 ntAPPRIS P1 TSL 5 BASIC2.84□□□□□ -1.95
CHKB-CPT1BH3BT56 RAG2-201ENST00000311485 2388 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.95
CHKB-CPT1BH3BT56 ADAM2-207ENST00000622267 2480 ntAPPRIS ALT2 TSL 2 BASIC2.84□□□□□ -1.96
CHKB-CPT1BH3BT56 GABRA2-202ENST00000381620 2525 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.96
CHKB-CPT1BH3BT56 IRAK1BP1-204ENST00000607739 1387 ntTSL 2 BASIC2.84□□□□□ -1.96
CHKB-CPT1BH3BT56 LARP7-201ENST00000324052 2164 ntAPPRIS P1 TSL 5 BASIC2.84□□□□□ -1.96
CHKB-CPT1BH3BT56 TARID-205ENST00000607033 2960 ntTSL 1 (best) BASIC2.84□□□□□ -1.96
CHKB-CPT1BH3BT56 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.96
CHKB-CPT1BH3BT56 RGS4-202ENST00000367908 2606 ntTSL 2 BASIC2.84□□□□□ -1.96
CHKB-CPT1BH3BT56 LINC02010-202ENST00000471638 1829 ntTSL 1 (best) BASIC2.84□□□□□ -1.96
CHKB-CPT1BH3BT56 AC106895.2-201ENST00000511291 1824 ntTSL 3 BASIC2.84□□□□□ -1.96
CHKB-CPT1BH3BT56 SCN1A-210ENST00000635776 10107 ntTSL 5 BASIC2.83□□□□□ -1.96
CHKB-CPT1BH3BT56 AC003973.3-201ENST00000624863 2822 ntBASIC2.83□□□□□ -1.96
CHKB-CPT1BH3BT56 TNFSF11-202ENST00000358545 1520 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
CHKB-CPT1BH3BT56 SELL-201ENST00000236147 2436 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
CHKB-CPT1BH3BT56 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
CHKB-CPT1BH3BT56 SNX10-202ENST00000396376 2491 ntAPPRIS P2 TSL 1 (best) BASIC2.83□□□□□ -1.96
CHKB-CPT1BH3BT56 AC112255.1-201ENST00000624070 2493 ntBASIC2.83□□□□□ -1.96
CHKB-CPT1BH3BT56 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC2.83□□□□□ -1.96
CHKB-CPT1BH3BT56 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC2.83□□□□□ -1.96
CHKB-CPT1BH3BT56 FSBP-203ENST00000611249 2181 ntAPPRIS P1 TSL 5 BASIC2.83□□□□□ -1.96
CHKB-CPT1BH3BT56 CP-201ENST00000264613 4676 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
CHKB-CPT1BH3BT56 CEP85L-201ENST00000360290 1736 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
CHKB-CPT1BH3BT56 ARHGAP21-218ENST00000636789 4210 ntTSL 2 BASIC2.83□□□□□ -1.96
CHKB-CPT1BH3BT56 CKS1B-201ENST00000308987 759 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
CHKB-CPT1BH3BT56 RN7SKP44-201ENST00000363602 316 ntBASIC2.83□□□□□ -1.96
CHKB-CPT1BH3BT56 RNU1-84P-201ENST00000365447 164 ntBASIC2.83□□□□□ -1.96
CHKB-CPT1BH3BT56 RN7SKP1-201ENST00000365525 307 ntBASIC2.83□□□□□ -1.96
CHKB-CPT1BH3BT56 ZCCHC6-202ENST00000375947 611 ntTSL 5 BASIC2.83□□□□□ -1.96
CHKB-CPT1BH3BT56 AC117402.1-202ENST00000383686 820 ntTSL 2 BASIC2.83□□□□□ -1.96
CHKB-CPT1BH3BT56 TRAV6-201ENST00000390428 404 ntAPPRIS P1 BASIC2.83□□□□□ -1.96
CHKB-CPT1BH3BT56 RNU1-56P-201ENST00000391303 164 ntBASIC2.83□□□□□ -1.96
CHKB-CPT1BH3BT56 PSG11-203ENST00000403486 1163 ntTSL 2 BASIC2.83□□□□□ -1.96
CHKB-CPT1BH3BT56 AC009237.9-201ENST00000414800 347 ntBASIC2.83□□□□□ -1.96
CHKB-CPT1BH3BT56 AL390195.1-202ENST00000416099 723 ntTSL 2 BASIC2.83□□□□□ -1.96
CHKB-CPT1BH3BT56 AP000221.1-201ENST00000419694 1046 ntTSL 3 BASIC2.83□□□□□ -1.96
CHKB-CPT1BH3BT56 AC073367.1-201ENST00000421480 697 ntTSL 2 BASIC2.83□□□□□ -1.96
CHKB-CPT1BH3BT56 ICA1L-210ENST00000425178 879 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
CHKB-CPT1BH3BT56 SEC63P1-201ENST00000425785 1258 ntBASIC2.83□□□□□ -1.96
CHKB-CPT1BH3BT56 NANOGP6-201ENST00000429190 847 ntBASIC2.83□□□□□ -1.96
CHKB-CPT1BH3BT56 AC112492.2-201ENST00000432774 1030 ntBASIC2.83□□□□□ -1.96
CHKB-CPT1BH3BT56 PSMD10P2-201ENST00000432890 672 ntBASIC2.83□□□□□ -1.96
CHKB-CPT1BH3BT56 AL645939.3-201ENST00000435408 225 ntBASIC2.83□□□□□ -1.96
CHKB-CPT1BH3BT56 AL445928.1-201ENST00000435545 222 ntBASIC2.83□□□□□ -1.96
CHKB-CPT1BH3BT56 RPS26P2-201ENST00000440331 348 ntBASIC2.83□□□□□ -1.96
CHKB-CPT1BH3BT56 AL353748.1-201ENST00000440753 474 ntBASIC2.83□□□□□ -1.96
CHKB-CPT1BH3BT56 GTF2IP14-201ENST00000441415 586 ntBASIC2.83□□□□□ -1.96
CHKB-CPT1BH3BT56 LINC01704-202ENST00000442358 649 ntTSL 3 BASIC2.83□□□□□ -1.96
CHKB-CPT1BH3BT56 AC011753.3-201ENST00000443436 406 ntBASIC2.83□□□□□ -1.96
CHKB-CPT1BH3BT56 RNF216-IT1-201ENST00000443837 337 ntTSL 5 BASIC2.83□□□□□ -1.96
CHKB-CPT1BH3BT56 Z80107.2-201ENST00000445127 392 ntBASIC2.83□□□□□ -1.96
CHKB-CPT1BH3BT56 ZNF619P1-201ENST00000446539 752 ntBASIC2.83□□□□□ -1.96
CHKB-CPT1BH3BT56 AL020997.1-201ENST00000446554 349 ntBASIC2.83□□□□□ -1.96
CHKB-CPT1BH3BT56 FTLP8-201ENST00000446770 267 ntBASIC2.83□□□□□ -1.96
CHKB-CPT1BH3BT56 PRELID1P3-201ENST00000450055 643 ntBASIC2.83□□□□□ -1.96
CHKB-CPT1BH3BT56 AL450023.1-201ENST00000450868 751 ntBASIC2.83□□□□□ -1.96
CHKB-CPT1BH3BT56 AL021154.1-201ENST00000451217 456 ntTSL 3 BASIC2.83□□□□□ -1.96
CHKB-CPT1BH3BT56 ST13P21-201ENST00000453250 1098 ntBASIC2.83□□□□□ -1.96
CHKB-CPT1BH3BT56 MED28P7-201ENST00000456611 530 ntBASIC2.83□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 111.3 ms