Protein–RNA interactions for Protein: A0A1B0GU29

SMIM28, Small integral membrane protein 28, humanhuman

Predictions only

Length 152 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM28A0A1B0GU29 ARHGAP5-210ENST00000556611 4824 ntAPPRIS ALT1 TSL 5 BASIC5.65□□□□□ -1.51
SMIM28A0A1B0GU29 EMSY-201ENST00000334736 5508 ntAPPRIS P3 TSL 5 BASIC5.65□□□□□ -1.51
SMIM28A0A1B0GU29 RABGEF1-202ENST00000380828 3864 ntTSL 2 BASIC5.65□□□□□ -1.51
SMIM28A0A1B0GU29 CNGA1-207ENST00000514170 2837 ntAPPRIS P3 TSL 5 BASIC5.65□□□□□ -1.51
SMIM28A0A1B0GU29 THRB-IT1-201ENST00000425296 1754 ntTSL 2 BASIC5.65□□□□□ -1.51
SMIM28A0A1B0GU29 FOXP2-202ENST00000360232 1412 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
SMIM28A0A1B0GU29 MTHFD2L-207ENST00000433372 1407 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
SMIM28A0A1B0GU29 TET1-201ENST00000373644 9288 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
SMIM28A0A1B0GU29 CD47-201ENST00000355354 5020 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
SMIM28A0A1B0GU29 DAZ4-205ENST00000440066 1891 ntTSL 5 BASIC5.64□□□□□ -1.51
SMIM28A0A1B0GU29 DAZ1-206ENST00000620725 1891 ntTSL 5 BASIC5.64□□□□□ -1.51
SMIM28A0A1B0GU29 IFIT2-201ENST00000371826 3489 ntAPPRIS P2 TSL 1 (best) BASIC5.64□□□□□ -1.51
SMIM28A0A1B0GU29 ERVW-1-201ENST00000493463 2925 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
SMIM28A0A1B0GU29 AP000547.3-204ENST00000588548 2523 ntBASIC5.64□□□□□ -1.51
SMIM28A0A1B0GU29 NUP37-201ENST00000251074 1203 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
SMIM28A0A1B0GU29 LINC01317-201ENST00000366209 779 ntTSL 5 BASIC5.64□□□□□ -1.51
SMIM28A0A1B0GU29 OR8V1P-201ENST00000395193 873 ntBASIC5.64□□□□□ -1.51
SMIM28A0A1B0GU29 AC093162.1-201ENST00000419682 124 ntBASIC5.64□□□□□ -1.51
SMIM28A0A1B0GU29 AC022535.1-201ENST00000420082 691 ntTSL 3 BASIC5.64□□□□□ -1.51
SMIM28A0A1B0GU29 AC006455.6-201ENST00000426192 893 ntBASIC5.64□□□□□ -1.51
SMIM28A0A1B0GU29 Z82246.1-201ENST00000428201 457 ntTSL 2 BASIC5.64□□□□□ -1.51
SMIM28A0A1B0GU29 Z82198.2-201ENST00000434741 567 ntTSL 4 BASIC5.64□□□□□ -1.51
SMIM28A0A1B0GU29 RPS29P10-201ENST00000439197 166 ntBASIC5.64□□□□□ -1.51
SMIM28A0A1B0GU29 PARGP1-202ENST00000440803 790 ntTSL 2 BASIC5.64□□□□□ -1.51
SMIM28A0A1B0GU29 AC023271.1-201ENST00000445936 1090 ntBASIC5.64□□□□□ -1.51
SMIM28A0A1B0GU29 OTX2P1-201ENST00000450956 354 ntBASIC5.64□□□□□ -1.51
SMIM28A0A1B0GU29 SBDSP1-204ENST00000453858 737 ntBASIC5.64□□□□□ -1.51
SMIM28A0A1B0GU29 DNAJB5P1-201ENST00000454004 806 ntBASIC5.64□□□□□ -1.51
SMIM28A0A1B0GU29 AC093827.1-201ENST00000480094 861 ntBASIC5.64□□□□□ -1.51
SMIM28A0A1B0GU29 AC008695.1-201ENST00000514667 6393 ntAPPRIS P1 TSL 2 BASIC5.64□□□□□ -1.51
SMIM28A0A1B0GU29 SUMO2P19-201ENST00000518920 295 ntBASIC5.64□□□□□ -1.51
SMIM28A0A1B0GU29 AC022360.1-201ENST00000521058 340 ntBASIC5.64□□□□□ -1.51
SMIM28A0A1B0GU29 AP002373.2-201ENST00000541631 1060 ntBASIC5.64□□□□□ -1.51
SMIM28A0A1B0GU29 C8orf59-206ENST00000545322 491 ntTSL 3 BASIC5.64□□□□□ -1.51
SMIM28A0A1B0GU29 AC092490.3-201ENST00000545370 572 ntBASIC5.64□□□□□ -1.51
SMIM28A0A1B0GU29 AC016747.2-201ENST00000605902 364 ntTSL 2 BASIC5.64□□□□□ -1.51
SMIM28A0A1B0GU29 AC133644.2-201ENST00000608142 540 ntBASIC5.64□□□□□ -1.51
SMIM28A0A1B0GU29 AC105402.3-203ENST00000608822 885 ntTSL 5 BASIC5.64□□□□□ -1.51
SMIM28A0A1B0GU29 MIR6730-201ENST00000622213 67 ntBASIC5.64□□□□□ -1.51
SMIM28A0A1B0GU29 AC015660.5-201ENST00000623238 564 ntBASIC5.64□□□□□ -1.51
SMIM28A0A1B0GU29 CYP3A7-CYP3A51P-202ENST00000620220 1704 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
SMIM28A0A1B0GU29 SLC4A7-206ENST00000428386 7385 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
SMIM28A0A1B0GU29 RNMT-201ENST00000262173 6051 ntAPPRIS P1 TSL 2 BASIC5.64□□□□□ -1.51
SMIM28A0A1B0GU29 ZNF83-202ENST00000536937 2726 ntAPPRIS P1 TSL 2 BASIC5.64□□□□□ -1.51
SMIM28A0A1B0GU29 ZNF492-201ENST00000456783 4245 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
SMIM28A0A1B0GU29 MTND5P12-201ENST00000502851 1449 ntBASIC5.64□□□□□ -1.51
SMIM28A0A1B0GU29 ETV1-208ENST00000420159 6231 ntTSL 2 BASIC5.64□□□□□ -1.51
SMIM28A0A1B0GU29 AC016745.2-201ENST00000608834 3443 ntBASIC5.64□□□□□ -1.51
SMIM28A0A1B0GU29 MSL3P1-202ENST00000440028 1468 ntBASIC5.64□□□□□ -1.51
SMIM28A0A1B0GU29 CREM-202ENST00000342105 1541 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
SMIM28A0A1B0GU29 CASP1-208ENST00000527979 1521 ntTSL 5 BASIC5.64□□□□□ -1.51
SMIM28A0A1B0GU29 AP000641.1-201ENST00000531988 1639 ntBASIC5.63□□□□□ -1.51
SMIM28A0A1B0GU29 NSUN3-201ENST00000314622 3289 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
SMIM28A0A1B0GU29 LARS-201ENST00000274562 2213 ntTSL 2 BASIC5.63□□□□□ -1.51
SMIM28A0A1B0GU29 DGKH-210ENST00000628433 3449 ntTSL 2 BASIC5.63□□□□□ -1.51
SMIM28A0A1B0GU29 CDH19-201ENST00000262150 6341 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
SMIM28A0A1B0GU29 KIN-201ENST00000379562 6348 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
SMIM28A0A1B0GU29 RAPGEF2-201ENST00000264431 6949 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
SMIM28A0A1B0GU29 POU1F1-201ENST00000344265 1149 ntTSL 5 BASIC5.63□□□□□ -1.51
SMIM28A0A1B0GU29 SVBP-202ENST00000372522 650 ntAPPRIS P1 TSL 3 BASIC5.63□□□□□ -1.51
SMIM28A0A1B0GU29 CYTOR-204ENST00000409898 560 ntTSL 5 BASIC5.63□□□□□ -1.51
SMIM28A0A1B0GU29 MIR4435-2HG-214ENST00000453478 560 ntTSL 4 BASIC5.63□□□□□ -1.51
SMIM28A0A1B0GU29 TAAR4P-201ENST00000454843 1039 ntBASIC5.63□□□□□ -1.51
SMIM28A0A1B0GU29 AC097484.1-201ENST00000471148 389 ntBASIC5.63□□□□□ -1.51
SMIM28A0A1B0GU29 AADACP1-204ENST00000483636 1285 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
SMIM28A0A1B0GU29 RPL7P41-201ENST00000485823 957 ntBASIC5.63□□□□□ -1.51
SMIM28A0A1B0GU29 RN7SL97P-201ENST00000486780 299 ntBASIC5.63□□□□□ -1.51
SMIM28A0A1B0GU29 AC022133.1-201ENST00000490961 571 ntBASIC5.63□□□□□ -1.51
SMIM28A0A1B0GU29 AC018680.1-201ENST00000513332 875 ntTSL 3 BASIC5.63□□□□□ -1.51
SMIM28A0A1B0GU29 AC006427.1-201ENST00000514359 712 ntBASIC5.63□□□□□ -1.51
SMIM28A0A1B0GU29 AC007406.1-201ENST00000544067 315 ntTSL 3 BASIC5.63□□□□□ -1.51
SMIM28A0A1B0GU29 AC025263.2-201ENST00000550437 548 ntAPPRIS P1 TSL 5 BASIC5.63□□□□□ -1.51
SMIM28A0A1B0GU29 AC074031.1-201ENST00000550634 734 ntTSL 3 BASIC5.63□□□□□ -1.51
SMIM28A0A1B0GU29 AC142086.4-201ENST00000568904 650 ntTSL 3 BASIC5.63□□□□□ -1.51
SMIM28A0A1B0GU29 LINC01862-201ENST00000593792 478 ntTSL 2 BASIC5.63□□□□□ -1.51
SMIM28A0A1B0GU29 LINC01198-207ENST00000598084 881 ntTSL 5 BASIC5.63□□□□□ -1.51
SMIM28A0A1B0GU29 AL356608.1-201ENST00000610034 820 ntBASIC5.63□□□□□ -1.51
SMIM28A0A1B0GU29 AP005131.7-201ENST00000610087 611 ntBASIC5.63□□□□□ -1.51
SMIM28A0A1B0GU29 AC010632.3-201ENST00000611377 369 ntBASIC5.63□□□□□ -1.51
SMIM28A0A1B0GU29 AF117829.2-201ENST00000619538 361 ntBASIC5.63□□□□□ -1.51
SMIM28A0A1B0GU29 AC021422.1-201ENST00000621212 473 ntBASIC5.63□□□□□ -1.51
SMIM28A0A1B0GU29 VWC2L-201ENST00000312504 4610 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
SMIM28A0A1B0GU29 RYR2-201ENST00000360064 14850 ntAPPRIS ALT2 TSL 5 BASIC5.63□□□□□ -1.51
SMIM28A0A1B0GU29 SLC26A7-201ENST00000276609 5263 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
SMIM28A0A1B0GU29 ZNF571-203ENST00000451802 2265 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
SMIM28A0A1B0GU29 LDAH-211ENST00000541941 3807 ntTSL 2 BASIC5.63□□□□□ -1.51
SMIM28A0A1B0GU29 AHCTF1-201ENST00000326225 8633 ntAPPRIS P2 TSL 1 (best) BASIC5.63□□□□□ -1.51
SMIM28A0A1B0GU29 LRMDA-208ENST00000496424 3923 ntTSL 2 BASIC5.63□□□□□ -1.51
SMIM28A0A1B0GU29 LINC01206-204ENST00000482787 9580 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
SMIM28A0A1B0GU29 PEX26-201ENST00000329627 18445 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
SMIM28A0A1B0GU29 RGSL1-201ENST00000294854 3696 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
SMIM28A0A1B0GU29 LMO3-201ENST00000261169 3810 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
SMIM28A0A1B0GU29 INHBA-AS1-203ENST00000422822 2312 ntTSL 2 BASIC5.62□□□□□ -1.51
SMIM28A0A1B0GU29 ZNF891-201ENST00000537226 15455 ntAPPRIS P1 TSL 2 BASIC5.62□□□□□ -1.51
SMIM28A0A1B0GU29 OR9G4-201ENST00000302957 984 ntBASIC5.62□□□□□ -1.51
SMIM28A0A1B0GU29 SNURFL-201ENST00000309296 343 ntBASIC5.62□□□□□ -1.51
SMIM28A0A1B0GU29 RNU4-4P-201ENST00000364588 130 ntBASIC5.62□□□□□ -1.51
SMIM28A0A1B0GU29 DEFB136-201ENST00000382209 237 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
SMIM28A0A1B0GU29 C2orf73-203ENST00000405749 576 ntTSL 4 BASIC5.62□□□□□ -1.51
SMIM28A0A1B0GU29 RNU6ATAC7P-201ENST00000408111 127 ntBASIC5.62□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 127.6 ms