Protein–RNA interactions for Protein: Q9Y296

TRAPPC4, Trafficking protein particle complex subunit 4, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4Q9Y296 AL713851.2-201ENST00000431209 332 ntTSL 2 BASIC4.99□□□□□ -1.61
TRAPPC4Q9Y296 LINC01506-201ENST00000432148 495 ntTSL 2 BASIC4.99□□□□□ -1.61
TRAPPC4Q9Y296 AL591438.1-201ENST00000433508 581 ntBASIC4.99□□□□□ -1.61
TRAPPC4Q9Y296 AC016772.1-201ENST00000444170 1261 ntBASIC4.99□□□□□ -1.61
TRAPPC4Q9Y296 AL161636.2-201ENST00000445179 927 ntBASIC4.99□□□□□ -1.61
TRAPPC4Q9Y296 EEF1B2P6-201ENST00000445713 673 ntBASIC4.99□□□□□ -1.61
TRAPPC4Q9Y296 RPL36AP39-201ENST00000445859 318 ntBASIC4.99□□□□□ -1.61
TRAPPC4Q9Y296 AC090804.1-201ENST00000448870 490 ntBASIC4.99□□□□□ -1.61
TRAPPC4Q9Y296 AL358876.1-201ENST00000453364 1075 ntBASIC4.99□□□□□ -1.61
TRAPPC4Q9Y296 AC245028.2-201ENST00000458673 253 ntBASIC4.99□□□□□ -1.61
TRAPPC4Q9Y296 GIMAP2-202ENST00000474605 309 ntTSL 3 BASIC4.99□□□□□ -1.61
TRAPPC4Q9Y296 RN7SL273P-201ENST00000481561 299 ntBASIC4.99□□□□□ -1.61
TRAPPC4Q9Y296 AC092709.1-201ENST00000521355 1045 ntBASIC4.99□□□□□ -1.61
TRAPPC4Q9Y296 AC062004.1-202ENST00000524014 246 ntTSL 5 BASIC4.99□□□□□ -1.61
TRAPPC4Q9Y296 AL390816.1-201ENST00000553990 322 ntTSL 3 BASIC4.99□□□□□ -1.61
TRAPPC4Q9Y296 LINC00933-205ENST00000560917 449 ntTSL 3 BASIC4.99□□□□□ -1.61
TRAPPC4Q9Y296 AL390726.5-202ENST00000564800 256 ntBASIC4.99□□□□□ -1.61
TRAPPC4Q9Y296 AC114947.2-202ENST00000569313 643 ntTSL 3 BASIC4.99□□□□□ -1.61
TRAPPC4Q9Y296 AC107926.1-201ENST00000581673 621 ntTSL 3 BASIC4.99□□□□□ -1.61
TRAPPC4Q9Y296 MIR4310-201ENST00000582950 57 ntBASIC4.99□□□□□ -1.61
TRAPPC4Q9Y296 AL354733.2-210ENST00000586211 647 ntTSL 5 BASIC4.99□□□□□ -1.61
TRAPPC4Q9Y296 AC011990.1-201ENST00000592809 734 ntTSL 3 BASIC4.99□□□□□ -1.61
TRAPPC4Q9Y296 AC009237.13-201ENST00000603193 276 ntBASIC4.99□□□□□ -1.61
TRAPPC4Q9Y296 FO393422.1-201ENST00000603908 708 ntBASIC4.99□□□□□ -1.61
TRAPPC4Q9Y296 AL691477.1-201ENST00000624398 162 ntBASIC4.99□□□□□ -1.61
TRAPPC4Q9Y296 AC239809.3-202ENST00000628902 686 ntTSL 5 BASIC4.99□□□□□ -1.61
TRAPPC4Q9Y296 PHACTR2P1-202ENST00000636592 773 ntTSL 5 BASIC4.99□□□□□ -1.61
TRAPPC4Q9Y296 CACNB4-243ENST00000637217 8188 ntTSL 5 BASIC4.99□□□□□ -1.61
TRAPPC4Q9Y296 SLC4A7-206ENST00000428386 7385 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
TRAPPC4Q9Y296 KCNC4-201ENST00000369787 18750 ntAPPRIS P3 TSL 1 (best) BASIC4.99□□□□□ -1.61
TRAPPC4Q9Y296 NDUFS1-207ENST00000455934 3361 ntTSL 2 BASIC4.99□□□□□ -1.61
TRAPPC4Q9Y296 AL359715.3-201ENST00000569267 2123 ntBASIC4.99□□□□□ -1.61
TRAPPC4Q9Y296 EDA2R-202ENST00000374719 3418 ntAPPRIS P3 TSL 1 (best) BASIC4.98□□□□□ -1.61
TRAPPC4Q9Y296 PRDM2-206ENST00000413440 6175 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
TRAPPC4Q9Y296 DSE-204ENST00000452085 10586 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
TRAPPC4Q9Y296 NOSTRIN-206ENST00000444448 2537 ntTSL 5 BASIC4.98□□□□□ -1.61
TRAPPC4Q9Y296 STARD9-201ENST00000290607 15567 ntAPPRIS P1 TSL 5 BASIC4.98□□□□□ -1.61
TRAPPC4Q9Y296 NCOA3-203ENST00000372004 7939 ntAPPRIS ALT2 TSL 1 (best) BASIC4.98□□□□□ -1.61
TRAPPC4Q9Y296 CD86-204ENST00000469710 1604 ntTSL 2 BASIC4.98□□□□□ -1.61
TRAPPC4Q9Y296 MARCH1-202ENST00000339875 2476 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
TRAPPC4Q9Y296 AMD1-204ENST00000368885 3438 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
TRAPPC4Q9Y296 TMSB4XP4-201ENST00000323496 618 ntBASIC4.98□□□□□ -1.61
TRAPPC4Q9Y296 RPL21P67-201ENST00000402896 478 ntBASIC4.98□□□□□ -1.61
TRAPPC4Q9Y296 RPL10P10-201ENST00000403509 664 ntBASIC4.98□□□□□ -1.61
TRAPPC4Q9Y296 RNA5SP178-201ENST00000410380 128 ntBASIC4.98□□□□□ -1.61
TRAPPC4Q9Y296 SETP15-201ENST00000412724 337 ntBASIC4.98□□□□□ -1.61
TRAPPC4Q9Y296 AL355339.1-202ENST00000417542 458 ntTSL 2 BASIC4.98□□□□□ -1.61
TRAPPC4Q9Y296 C9orf57-202ENST00000424431 1297 ntAPPRIS ALT2 TSL 1 (best) BASIC4.98□□□□□ -1.61
TRAPPC4Q9Y296 NANOGP4-201ENST00000427230 913 ntBASIC4.98□□□□□ -1.61
TRAPPC4Q9Y296 AL354896.1-201ENST00000430214 561 ntTSL 4 BASIC4.98□□□□□ -1.61
TRAPPC4Q9Y296 AL355339.1-201ENST00000434386 435 ntTSL 2 BASIC4.98□□□□□ -1.61
TRAPPC4Q9Y296 FMO7P-201ENST00000436045 768 ntBASIC4.98□□□□□ -1.61
TRAPPC4Q9Y296 AL592494.1-201ENST00000437523 309 ntTSL 5 BASIC4.98□□□□□ -1.61
TRAPPC4Q9Y296 AL590764.1-201ENST00000450860 726 ntTSL 3 BASIC4.98□□□□□ -1.61
TRAPPC4Q9Y296 VDAC2P4-201ENST00000452925 711 ntBASIC4.98□□□□□ -1.61
TRAPPC4Q9Y296 AC099344.3-201ENST00000454489 626 ntTSL 3 BASIC4.98□□□□□ -1.61
TRAPPC4Q9Y296 AP000797.2-201ENST00000475768 606 ntBASIC4.98□□□□□ -1.61
TRAPPC4Q9Y296 LINC02217-201ENST00000505844 687 ntTSL 2 BASIC4.98□□□□□ -1.61
TRAPPC4Q9Y296 MTATP6P1-201ENST00000514057 681 ntBASIC4.98□□□□□ -1.61
TRAPPC4Q9Y296 EIF3KP3-201ENST00000514461 639 ntBASIC4.98□□□□□ -1.61
TRAPPC4Q9Y296 RNU6-964P-201ENST00000516524 69 ntBASIC4.98□□□□□ -1.61
TRAPPC4Q9Y296 AC015720.2-201ENST00000567709 334 ntBASIC4.98□□□□□ -1.61
TRAPPC4Q9Y296 DPRXP4-201ENST00000578053 568 ntBASIC4.98□□□□□ -1.61
TRAPPC4Q9Y296 AC015845.1-202ENST00000580184 242 ntTSL 3 BASIC4.98□□□□□ -1.61
TRAPPC4Q9Y296 PRPF19P1-201ENST00000584766 898 ntBASIC4.98□□□□□ -1.61
TRAPPC4Q9Y296 LINC01835-202ENST00000589345 450 ntTSL 3 BASIC4.98□□□□□ -1.61
TRAPPC4Q9Y296 ZNF667-AS1-207ENST00000592146 668 ntTSL 5 BASIC4.98□□□□□ -1.61
TRAPPC4Q9Y296 AC006272.2-201ENST00000594725 163 ntBASIC4.98□□□□□ -1.61
TRAPPC4Q9Y296 Z98949.1-203ENST00000597284 851 ntTSL 5 BASIC4.98□□□□□ -1.61
TRAPPC4Q9Y296 ASNSD1-208ENST00000607690 535 ntTSL 2 BASIC4.98□□□□□ -1.61
TRAPPC4Q9Y296 ASNSD1-209ENST00000607829 581 ntTSL 2 BASIC4.98□□□□□ -1.61
TRAPPC4Q9Y296 RNA5SP440-201ENST00000612665 119 ntBASIC4.98□□□□□ -1.61
TRAPPC4Q9Y296 RN7SL787P-201ENST00000613000 284 ntBASIC4.98□□□□□ -1.61
TRAPPC4Q9Y296 AC126175.1-201ENST00000617041 758 ntBASIC4.98□□□□□ -1.61
TRAPPC4Q9Y296 AC010809.3-201ENST00000621310 641 ntBASIC4.98□□□□□ -1.61
TRAPPC4Q9Y296 uc_338.7-201ENST00000621834 124 ntBASIC4.98□□□□□ -1.61
TRAPPC4Q9Y296 LINC01320-210ENST00000626008 929 ntTSL 5 BASIC4.98□□□□□ -1.61
TRAPPC4Q9Y296 ANXA1-202ENST00000376911 2209 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
TRAPPC4Q9Y296 ZNF410-211ENST00000555044 2601 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
TRAPPC4Q9Y296 FNIP1-202ENST00000307968 6388 ntAPPRIS ALT2 TSL 5 BASIC4.98□□□□□ -1.61
TRAPPC4Q9Y296 LINC01375-201ENST00000428485 1860 ntTSL 2 BASIC4.98□□□□□ -1.61
TRAPPC4Q9Y296 KIAA1328-202ENST00000586135 1863 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
TRAPPC4Q9Y296 MATR3-228ENST00000620916 3134 ntTSL 5 BASIC4.98□□□□□ -1.61
TRAPPC4Q9Y296 ZNF573-208ENST00000536220 2257 ntAPPRIS P1 TSL 3 BASIC4.98□□□□□ -1.61
TRAPPC4Q9Y296 DPP8-210ENST00000559233 2953 ntAPPRIS P4 TSL 2 BASIC4.98□□□□□ -1.61
TRAPPC4Q9Y296 MBNL1-203ENST00000324196 5225 ntTSL 5 BASIC4.98□□□□□ -1.61
TRAPPC4Q9Y296 SASS6-201ENST00000287482 3880 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
TRAPPC4Q9Y296 DSPP-201ENST00000282478 4281 ntAPPRIS P1 TSL 5 BASIC4.97□□□□□ -1.61
TRAPPC4Q9Y296 ICE2P1-201ENST00000512800 1849 ntBASIC4.97□□□□□ -1.61
TRAPPC4Q9Y296 ALS2CR12-202ENST00000392257 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC4.97□□□□□ -1.61
TRAPPC4Q9Y296 CALCOCO2-204ENST00000448105 1916 ntTSL 2 BASIC4.97□□□□□ -1.61
TRAPPC4Q9Y296 UGT2A1-205ENST00000512704 2519 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
TRAPPC4Q9Y296 ZNF345-215ENST00000614069 3103 ntAPPRIS P1 TSL 3 BASIC4.97□□□□□ -1.61
TRAPPC4Q9Y296 SLFN13-201ENST00000285013 8469 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
TRAPPC4Q9Y296 CALU-203ENST00000479257 2572 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
TRAPPC4Q9Y296 AC068870.1-201ENST00000563737 2455 ntBASIC4.97□□□□□ -1.61
TRAPPC4Q9Y296 ST8SIA4-201ENST00000231461 6303 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
TRAPPC4Q9Y296 SERPINB7-207ENST00000546027 1951 ntAPPRIS P1 TSL 2 BASIC4.97□□□□□ -1.61
TRAPPC4Q9Y296 AC090518.1-201ENST00000562300 1495 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
TRAPPC4Q9Y296 LINC00474-201ENST00000374014 769 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 78.1 ms