Protein–RNA interactions for Protein: Q9UPT8

ZC3H4, Zinc finger CCCH domain-containing protein 4, humanhuman

Known RBP Predictions only

Length 1,303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H4Q9UPT8 CPSF6-202ENST00000435070 6616 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
ZC3H4Q9UPT8 LINC01204-203ENST00000609127 2900 ntTSL 2 BASIC8.41□□□□□ -1.06
ZC3H4Q9UPT8 ZC3H13-201ENST00000242848 8018 ntAPPRIS ALT2 TSL 5 BASIC8.41□□□□□ -1.06
ZC3H4Q9UPT8 AC016747.4-201ENST00000462959 1383 ntTSL 2 BASIC8.41□□□□□ -1.06
ZC3H4Q9UPT8 MSL3-206ENST00000380693 2377 ntTSL 2 BASIC8.4□□□□□ -1.06
ZC3H4Q9UPT8 SLC6A16-202ENST00000454748 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC8.4□□□□□ -1.06
ZC3H4Q9UPT8 CLCN5-201ENST00000307367 3177 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
ZC3H4Q9UPT8 RIF1-205ENST00000444746 7897 ntAPPRIS P3 TSL 1 (best) BASIC8.4□□□□□ -1.06
ZC3H4Q9UPT8 SUN3-201ENST00000297325 1416 ntAPPRIS P1 TSL 5 BASIC8.4□□□□□ -1.06
ZC3H4Q9UPT8 AC061975.7-201ENST00000592016 2692 ntBASIC8.4□□□□□ -1.06
ZC3H4Q9UPT8 IKZF3-203ENST00000346872 9667 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
ZC3H4Q9UPT8 HEPH-206ENST00000441993 4310 ntAPPRIS ALT2 TSL 1 (best) BASIC8.4□□□□□ -1.06
ZC3H4Q9UPT8 CDH2-202ENST00000399380 3737 ntTSL 2 BASIC8.4□□□□□ -1.06
ZC3H4Q9UPT8 PPP1R12B-216ENST00000608999 15248 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
ZC3H4Q9UPT8 RBPJ-214ENST00000507561 1689 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
ZC3H4Q9UPT8 EHBP1-203ENST00000405289 3591 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
ZC3H4Q9UPT8 UGT2B4-201ENST00000305107 2103 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
ZC3H4Q9UPT8 RNA5SP485-201ENST00000365053 119 ntBASIC8.4□□□□□ -1.06
ZC3H4Q9UPT8 IFNA21-201ENST00000380225 1024 ntAPPRIS P1 BASIC8.4□□□□□ -1.06
ZC3H4Q9UPT8 RNU6-116P-201ENST00000384042 109 ntBASIC8.4□□□□□ -1.06
ZC3H4Q9UPT8 GEMIN2P2-201ENST00000418195 715 ntBASIC8.4□□□□□ -1.06
ZC3H4Q9UPT8 AC027644.1-201ENST00000419595 298 ntBASIC8.4□□□□□ -1.06
ZC3H4Q9UPT8 AL158817.1-201ENST00000422310 933 ntTSL 3 BASIC8.4□□□□□ -1.06
ZC3H4Q9UPT8 LINC01798-203ENST00000428590 553 ntTSL 4 BASIC8.4□□□□□ -1.06
ZC3H4Q9UPT8 FTH1P10-202ENST00000430907 550 ntBASIC8.4□□□□□ -1.06
ZC3H4Q9UPT8 LINC01918-202ENST00000438148 415 ntTSL 3 BASIC8.4□□□□□ -1.06
ZC3H4Q9UPT8 MTND4LP16-201ENST00000440828 295 ntBASIC8.4□□□□□ -1.06
ZC3H4Q9UPT8 PMS2P9-201ENST00000441237 515 ntBASIC8.4□□□□□ -1.06
ZC3H4Q9UPT8 AL390961.3-201ENST00000458171 485 ntTSL 5 BASIC8.4□□□□□ -1.06
ZC3H4Q9UPT8 RN7SL254P-201ENST00000460609 284 ntBASIC8.4□□□□□ -1.06
ZC3H4Q9UPT8 DCUN1D1-204ENST00000469954 970 ntTSL 3 BASIC8.4□□□□□ -1.06
ZC3H4Q9UPT8 AC006499.5-201ENST00000505037 514 ntBASIC8.4□□□□□ -1.06
ZC3H4Q9UPT8 AC110716.1-201ENST00000506934 607 ntTSL 2 BASIC8.4□□□□□ -1.06
ZC3H4Q9UPT8 AC046134.1-201ENST00000514454 666 ntBASIC8.4□□□□□ -1.06
ZC3H4Q9UPT8 RN7SKP298-201ENST00000515950 94 ntBASIC8.4□□□□□ -1.06
ZC3H4Q9UPT8 AC027308.1-201ENST00000517993 110 ntBASIC8.4□□□□□ -1.06
ZC3H4Q9UPT8 AC104109.4-202ENST00000518409 1082 ntTSL 2 BASIC8.4□□□□□ -1.06
ZC3H4Q9UPT8 LECT2-205ENST00000522943 574 ntTSL 3 BASIC8.4□□□□□ -1.06
ZC3H4Q9UPT8 FAU-203ENST00000525297 355 ntTSL 5 BASIC8.4□□□□□ -1.06
ZC3H4Q9UPT8 IL18-204ENST00000528832 795 ntAPPRIS P3 TSL 3 BASIC8.4□□□□□ -1.06
ZC3H4Q9UPT8 AC019209.3-201ENST00000536949 772 ntTSL 3 BASIC8.4□□□□□ -1.06
ZC3H4Q9UPT8 AC007537.1-201ENST00000539347 327 ntBASIC8.4□□□□□ -1.06
ZC3H4Q9UPT8 AC122688.2-201ENST00000543922 585 ntTSL 3 BASIC8.4□□□□□ -1.06
ZC3H4Q9UPT8 CENPUP2-201ENST00000555897 1186 ntBASIC8.4□□□□□ -1.06
ZC3H4Q9UPT8 AC022929.1-201ENST00000560675 823 ntTSL 3 BASIC8.4□□□□□ -1.06
ZC3H4Q9UPT8 AC010325.1-202ENST00000562076 279 ntAPPRIS ALT2 TSL 1 (best) BASIC8.4□□□□□ -1.06
ZC3H4Q9UPT8 AC010327.2-201ENST00000587647 488 ntBASIC8.4□□□□□ -1.06
ZC3H4Q9UPT8 AC005537.1-201ENST00000588324 1238 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
ZC3H4Q9UPT8 MTCO2P22-201ENST00000603246 681 ntBASIC8.4□□□□□ -1.06
ZC3H4Q9UPT8 AC124916.2-201ENST00000604416 224 ntBASIC8.4□□□□□ -1.06
ZC3H4Q9UPT8 AC009994.1-201ENST00000606889 253 ntBASIC8.4□□□□□ -1.06
ZC3H4Q9UPT8 AL589743.6-201ENST00000611025 117 ntBASIC8.4□□□□□ -1.06
ZC3H4Q9UPT8 AC010133.1-201ENST00000615809 842 ntBASIC8.4□□□□□ -1.06
ZC3H4Q9UPT8 AL122023.1-201ENST00000622847 530 ntBASIC8.4□□□□□ -1.06
ZC3H4Q9UPT8 CR381653.2-201ENST00000624041 768 ntBASIC8.4□□□□□ -1.06
ZC3H4Q9UPT8 AL359697.1-201ENST00000624879 587 ntBASIC8.4□□□□□ -1.06
ZC3H4Q9UPT8 AC087821.2-201ENST00000637086 450 ntBASIC8.4□□□□□ -1.06
ZC3H4Q9UPT8 AC087565.3-203ENST00000641018 837 ntBASIC8.4□□□□□ -1.06
ZC3H4Q9UPT8 EPB41-201ENST00000343067 5956 ntAPPRIS P1 TSL 5 BASIC8.4□□□□□ -1.06
ZC3H4Q9UPT8 EIF3L-203ENST00000412331 3220 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
ZC3H4Q9UPT8 TLR10-202ENST00000361424 3484 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
ZC3H4Q9UPT8 ABCA6-206ENST00000590645 1511 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
ZC3H4Q9UPT8 PEAK1-202ENST00000558305 4644 ntTSL 4 BASIC8.4□□□□□ -1.06
ZC3H4Q9UPT8 CYP8B1-201ENST00000316161 3974 ntAPPRIS P1 BASIC8.4□□□□□ -1.06
ZC3H4Q9UPT8 ZRANB1-201ENST00000359653 5695 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.07
ZC3H4Q9UPT8 NECAP1-221ENST00000639955 3479 ntAPPRIS P2 TSL 5 BASIC8.4□□□□□ -1.07
ZC3H4Q9UPT8 PPP1R11-206ENST00000376773 1640 ntTSL 3 BASIC8.4□□□□□ -1.07
ZC3H4Q9UPT8 DNAJC5G-203ENST00000404433 1647 ntAPPRIS P1 TSL 5 BASIC8.4□□□□□ -1.07
ZC3H4Q9UPT8 RBM46-201ENST00000281722 2583 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.07
ZC3H4Q9UPT8 AC138393.1-206ENST00000540997 1886 ntBASIC8.4□□□□□ -1.07
ZC3H4Q9UPT8 CD109-203ENST00000437994 9401 ntAPPRIS ALT1 TSL 1 (best) BASIC8.39□□□□□ -1.07
ZC3H4Q9UPT8 ZNF595-204ENST00000609518 2115 ntAPPRIS ALT2 TSL 2 BASIC8.39□□□□□ -1.07
ZC3H4Q9UPT8 ZNF793-208ENST00000588578 4549 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
ZC3H4Q9UPT8 TEK-201ENST00000380036 4760 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
ZC3H4Q9UPT8 INTS7-204ENST00000440600 3136 ntTSL 2 BASIC8.39□□□□□ -1.07
ZC3H4Q9UPT8 PKHD1-201ENST00000340994 11589 ntAPPRIS ALT2 TSL 5 BASIC8.39□□□□□ -1.07
ZC3H4Q9UPT8 RBPJ-201ENST00000342295 5860 ntTSL 5 BASIC8.39□□□□□ -1.07
ZC3H4Q9UPT8 CCDC26-201ENST00000446592 1721 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
ZC3H4Q9UPT8 MTCO1P25-201ENST00000414449 1799 ntBASIC8.39□□□□□ -1.07
ZC3H4Q9UPT8 ANXA1-201ENST00000257497 1509 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
ZC3H4Q9UPT8 MT-CO1-201ENST00000361624 1542 ntAPPRIS P1 BASIC8.39□□□□□ -1.07
ZC3H4Q9UPT8 LIPG-201ENST00000261292 10441 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
ZC3H4Q9UPT8 Y_RNA.256-201ENST00000364594 104 ntBASIC8.39□□□□□ -1.07
ZC3H4Q9UPT8 RN7SKP69-201ENST00000365390 305 ntBASIC8.39□□□□□ -1.07
ZC3H4Q9UPT8 DEFB121-202ENST00000376314 389 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
ZC3H4Q9UPT8 IGLV3-10-201ENST00000390315 382 ntAPPRIS P1 BASIC8.39□□□□□ -1.07
ZC3H4Q9UPT8 RPL17P50-201ENST00000396131 546 ntBASIC8.39□□□□□ -1.07
ZC3H4Q9UPT8 HMGB3P31-201ENST00000413333 595 ntBASIC8.39□□□□□ -1.07
ZC3H4Q9UPT8 AL355339.1-202ENST00000417542 458 ntTSL 2 BASIC8.39□□□□□ -1.07
ZC3H4Q9UPT8 RAC1P4-201ENST00000419413 579 ntBASIC8.39□□□□□ -1.07
ZC3H4Q9UPT8 FAM96B-201ENST00000422424 676 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
ZC3H4Q9UPT8 LINC01384-201ENST00000422494 659 ntTSL 3 BASIC8.39□□□□□ -1.07
ZC3H4Q9UPT8 LINC01445-201ENST00000426205 812 ntTSL 3 BASIC8.39□□□□□ -1.07
ZC3H4Q9UPT8 AC068631.1-204ENST00000428501 534 ntTSL 3 BASIC8.39□□□□□ -1.07
ZC3H4Q9UPT8 MTCO1P3-201ENST00000429327 192 ntBASIC8.39□□□□□ -1.07
ZC3H4Q9UPT8 ENOX1-AS2-201ENST00000434273 609 ntTSL 3 BASIC8.39□□□□□ -1.07
ZC3H4Q9UPT8 AL355339.1-201ENST00000434386 435 ntTSL 2 BASIC8.39□□□□□ -1.07
ZC3H4Q9UPT8 MTATP6P30-201ENST00000443540 664 ntBASIC8.39□□□□□ -1.07
ZC3H4Q9UPT8 CASP12-206ENST00000446862 1196 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
ZC3H4Q9UPT8 UBBP5-201ENST00000446970 266 ntBASIC8.39□□□□□ -1.07
Retrieved 100 of 98,524 protein–RNA pairs in 114.3 ms