Protein–RNA interactions for Protein: Q9NPC8

SIX2, Homeobox protein SIX2, humanhuman

Predictions only

Length 291 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX2Q9NPC8 RN7SKP153-201ENST00000365026 316 ntBASIC5.67□□□□□ -1.5
SIX2Q9NPC8 CENPW-203ENST00000368328 750 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
SIX2Q9NPC8 TRAV9-1-201ENST00000390431 338 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
SIX2Q9NPC8 AL606970.4-201ENST00000424343 455 ntTSL 2 BASIC5.67□□□□□ -1.5
SIX2Q9NPC8 AC016994.1-201ENST00000425419 552 ntTSL 4 BASIC5.67□□□□□ -1.5
SIX2Q9NPC8 AL360007.1-201ENST00000426166 349 ntTSL 3 BASIC5.67□□□□□ -1.5
SIX2Q9NPC8 LINC02094-201ENST00000437646 520 ntTSL 2 BASIC5.67□□□□□ -1.5
SIX2Q9NPC8 GK-IT1-201ENST00000441146 397 ntTSL 5 BASIC5.67□□□□□ -1.5
SIX2Q9NPC8 AC092637.1-201ENST00000444745 510 ntTSL 5 BASIC5.67□□□□□ -1.5
SIX2Q9NPC8 REG1CP-206ENST00000447469 496 ntBASIC5.67□□□□□ -1.5
SIX2Q9NPC8 AL592431.1-201ENST00000451090 317 ntTSL 3 BASIC5.67□□□□□ -1.5
SIX2Q9NPC8 RPL7P45-201ENST00000455851 743 ntBASIC5.67□□□□□ -1.5
SIX2Q9NPC8 AC021660.1-201ENST00000465006 554 ntBASIC5.67□□□□□ -1.5
SIX2Q9NPC8 MTND3P6-201ENST00000485242 339 ntBASIC5.67□□□□□ -1.5
SIX2Q9NPC8 AC022133.1-201ENST00000490961 571 ntBASIC5.67□□□□□ -1.5
SIX2Q9NPC8 AC097110.1-201ENST00000507344 768 ntTSL 2 BASIC5.67□□□□□ -1.5
SIX2Q9NPC8 AC090568.1-201ENST00000509499 856 ntBASIC5.67□□□□□ -1.5
SIX2Q9NPC8 AC139722.1-201ENST00000512502 782 ntTSL 3 BASIC5.67□□□□□ -1.5
SIX2Q9NPC8 AC011389.1-203ENST00000513790 573 ntTSL 4 BASIC5.67□□□□□ -1.5
SIX2Q9NPC8 AC006427.1-201ENST00000514359 712 ntBASIC5.67□□□□□ -1.5
SIX2Q9NPC8 AC087360.1-201ENST00000518788 616 ntBASIC5.67□□□□□ -1.5
SIX2Q9NPC8 CASC19-203ENST00000523510 575 ntTSL 3 BASIC5.67□□□□□ -1.5
SIX2Q9NPC8 AC134775.1-201ENST00000531268 464 ntTSL 2 BASIC5.67□□□□□ -1.5
SIX2Q9NPC8 LINC02406-201ENST00000553029 546 ntTSL 3 BASIC5.67□□□□□ -1.5
SIX2Q9NPC8 EIF1AXP2-201ENST00000555940 413 ntBASIC5.67□□□□□ -1.5
SIX2Q9NPC8 AC012409.1-202ENST00000558449 639 ntTSL 2 BASIC5.67□□□□□ -1.5
SIX2Q9NPC8 ULK4P1-201ENST00000564495 875 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
SIX2Q9NPC8 ULK4P2-204ENST00000569682 798 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
SIX2Q9NPC8 AC024267.4-201ENST00000580782 683 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
SIX2Q9NPC8 RN7SL708P-201ENST00000580952 299 ntBASIC5.67□□□□□ -1.5
SIX2Q9NPC8 AC010615.3-201ENST00000597319 394 ntBASIC5.67□□□□□ -1.5
SIX2Q9NPC8 AC011462.3-201ENST00000598988 540 ntTSL 3 BASIC5.67□□□□□ -1.5
SIX2Q9NPC8 AC244131.2-201ENST00000612592 512 ntTSL 3 BASIC5.67□□□□□ -1.5
SIX2Q9NPC8 AC245041.2-202ENST00000613389 493 ntTSL 5 BASIC5.67□□□□□ -1.5
SIX2Q9NPC8 MIR6861-201ENST00000618657 64 ntBASIC5.67□□□□□ -1.5
SIX2Q9NPC8 AC006213.5-201ENST00000619673 288 ntBASIC5.67□□□□□ -1.5
SIX2Q9NPC8 SENP1-205ENST00000549595 1932 ntAPPRIS ALT1 TSL 5 BASIC5.67□□□□□ -1.5
SIX2Q9NPC8 ARHGAP24-201ENST00000264343 4572 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
SIX2Q9NPC8 FOXP1-IT1-201ENST00000498714 3539 ntTSL 2 BASIC5.67□□□□□ -1.5
SIX2Q9NPC8 AC073136.1-201ENST00000449426 2884 ntBASIC5.67□□□□□ -1.5
SIX2Q9NPC8 TCP11-207ENST00000418521 1575 ntAPPRIS ALT2 TSL 5 BASIC5.67□□□□□ -1.5
SIX2Q9NPC8 AC130360.2-201ENST00000533477 1556 ntBASIC5.67□□□□□ -1.5
SIX2Q9NPC8 MCM10-202ENST00000378714 4547 ntAPPRIS ALT2 TSL 1 (best) BASIC5.67□□□□□ -1.5
SIX2Q9NPC8 FAM184A-212ENST00000522284 2721 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
SIX2Q9NPC8 TRIM51GP-201ENST00000534741 1350 ntBASIC5.67□□□□□ -1.5
SIX2Q9NPC8 AL360270.2-201ENST00000562952 5985 ntBASIC5.67□□□□□ -1.5
SIX2Q9NPC8 VCAN-203ENST00000343200 9455 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
SIX2Q9NPC8 PFKFB2-202ENST00000367080 7094 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
SIX2Q9NPC8 SLC16A9-201ENST00000395347 3646 ntAPPRIS P1 TSL 2 BASIC5.66□□□□□ -1.5
SIX2Q9NPC8 WDYHV1-208ENST00000523984 1491 ntTSL 2 BASIC5.66□□□□□ -1.5
SIX2Q9NPC8 CLEC2B-201ENST00000228438 1700 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
SIX2Q9NPC8 FGL2-201ENST00000248598 4261 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
SIX2Q9NPC8 AC011755.1-201ENST00000623763 2049 ntBASIC5.66□□□□□ -1.5
SIX2Q9NPC8 OR6C75-202ENST00000641576 4569 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
SIX2Q9NPC8 SNORA17A-201ENST00000391185 133 ntBASIC5.66□□□□□ -1.5
SIX2Q9NPC8 AC068138.1-201ENST00000412635 217 ntBASIC5.66□□□□□ -1.5
SIX2Q9NPC8 SMIM2-IT1-201ENST00000415082 478 ntTSL 3 BASIC5.66□□□□□ -1.5
SIX2Q9NPC8 AL592402.1-201ENST00000417161 440 ntTSL 4 BASIC5.66□□□□□ -1.5
SIX2Q9NPC8 OR5K2-201ENST00000427338 1060 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
SIX2Q9NPC8 AL122019.1-201ENST00000438575 798 ntTSL 3 BASIC5.66□□□□□ -1.5
SIX2Q9NPC8 AC012594.1-271ENST00000438635 736 ntTSL 3 BASIC5.66□□□□□ -1.5
SIX2Q9NPC8 AL121917.1-201ENST00000441270 893 ntTSL 5 BASIC5.66□□□□□ -1.5
SIX2Q9NPC8 RPL7AP61-201ENST00000443410 636 ntBASIC5.66□□□□□ -1.5
SIX2Q9NPC8 AC016395.1-201ENST00000444086 465 ntTSL 3 BASIC5.66□□□□□ -1.5
SIX2Q9NPC8 AL589740.1-201ENST00000457513 756 ntTSL 3 BASIC5.66□□□□□ -1.5
SIX2Q9NPC8 NIFKP7-201ENST00000503365 834 ntBASIC5.66□□□□□ -1.5
SIX2Q9NPC8 LINC01365-202ENST00000512219 637 ntTSL 5 BASIC5.66□□□□□ -1.5
SIX2Q9NPC8 AP003086.3-201ENST00000527030 365 ntTSL 3 BASIC5.66□□□□□ -1.5
SIX2Q9NPC8 AC022031.2-203ENST00000587346 565 ntTSL 4 BASIC5.66□□□□□ -1.5
SIX2Q9NPC8 AC097467.3-209ENST00000595760 615 ntTSL 5 BASIC5.66□□□□□ -1.5
SIX2Q9NPC8 AC010618.3-202ENST00000598141 476 ntTSL 3 BASIC5.66□□□□□ -1.5
SIX2Q9NPC8 AL589674.2-201ENST00000604304 337 ntBASIC5.66□□□□□ -1.5
SIX2Q9NPC8 AL133406.3-201ENST00000606817 541 ntBASIC5.66□□□□□ -1.5
SIX2Q9NPC8 DEC1-204ENST00000614246 210 ntAPPRIS ALT2 TSL 1 (best) BASIC5.66□□□□□ -1.5
SIX2Q9NPC8 AC107905.1-201ENST00000616204 426 ntBASIC5.66□□□□□ -1.5
SIX2Q9NPC8 AP001962.1-201ENST00000624114 559 ntBASIC5.66□□□□□ -1.5
SIX2Q9NPC8 AL359094.1-202ENST00000629917 1113 ntTSL 5 BASIC5.66□□□□□ -1.5
SIX2Q9NPC8 SNORA17.5-201ENST00000630429 132 ntBASIC5.66□□□□□ -1.5
SIX2Q9NPC8 LEUTX-202ENST00000638280 667 ntAPPRIS P1 TSL 3 BASIC5.66□□□□□ -1.5
SIX2Q9NPC8 LMO3-209ENST00000447609 3365 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
SIX2Q9NPC8 RIC3-202ENST00000335425 5223 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
SIX2Q9NPC8 GTDC1-204ENST00000392869 10514 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
SIX2Q9NPC8 DSC3-201ENST00000360428 6939 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
SIX2Q9NPC8 CLCA3P-201ENST00000284054 2407 ntTSL 5 BASIC5.66□□□□□ -1.5
SIX2Q9NPC8 EMSY-206ENST00000525038 4376 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
SIX2Q9NPC8 IRAK4-203ENST00000448290 1381 ntTSL 5 BASIC5.66□□□□□ -1.5
SIX2Q9NPC8 CTAGE5-207ENST00000396165 3071 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
SIX2Q9NPC8 OAZ3-204ENST00000479764 3789 ntTSL 5 BASIC5.65□□□□□ -1.5
SIX2Q9NPC8 RGS4-202ENST00000367908 2606 ntTSL 2 BASIC5.65□□□□□ -1.5
SIX2Q9NPC8 KTN1-202ENST00000395308 4134 ntAPPRIS ALT2 TSL 1 (best) BASIC5.65□□□□□ -1.5
SIX2Q9NPC8 CEP120-203ENST00000328236 4710 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.5
SIX2Q9NPC8 STK31-201ENST00000354639 3596 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
SIX2Q9NPC8 MYO3A-203ENST00000376302 2723 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
SIX2Q9NPC8 ABCA10-201ENST00000269081 6362 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
SIX2Q9NPC8 UNC5C-205ENST00000610318 9403 ntTSL 5 BASIC5.65□□□□□ -1.5
SIX2Q9NPC8 BICD1-204ENST00000548411 8811 ntAPPRIS ALT1 TSL 1 (best) BASIC5.65□□□□□ -1.5
SIX2Q9NPC8 STXBP4-202ENST00000398391 2160 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
SIX2Q9NPC8 RNA5SP183-201ENST00000362452 119 ntBASIC5.65□□□□□ -1.5
SIX2Q9NPC8 U3.3-201ENST00000362986 216 ntBASIC5.65□□□□□ -1.5
SIX2Q9NPC8 LINC01317-201ENST00000366209 779 ntTSL 5 BASIC5.65□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 115.7 ms