Protein–RNA interactions for Protein: Q9H4W6

EBF3, Transcription factor COE3, humanhuman

Predictions only

Length 596 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EBF3Q9H4W6 ADGRL3-210ENST00000508946 4758 ntAPPRIS ALT2 TSL 5 BASIC5.9□□□□□ -1.47
EBF3Q9H4W6 ZCCHC8-201ENST00000536306 2904 ntTSL 1 (best) BASIC5.9□□□□□ -1.47
EBF3Q9H4W6 AC114774.1-201ENST00000507410 1770 ntBASIC5.9□□□□□ -1.47
EBF3Q9H4W6 SEC31A-226ENST00000508479 3397 ntTSL 2 BASIC5.9□□□□□ -1.47
EBF3Q9H4W6 LYRM2-208ENST00000523377 5353 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
EBF3Q9H4W6 BX322639.1-201ENST00000609841 6590 ntTSL 4 BASIC5.9□□□□□ -1.47
EBF3Q9H4W6 TRIM64B-201ENST00000329862 2689 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
EBF3Q9H4W6 RFX3-212ENST00000617270 9253 ntAPPRIS P1 TSL 2 BASIC5.9□□□□□ -1.47
EBF3Q9H4W6 CASC15-206ENST00000606851 1889 ntTSL 2 BASIC5.9□□□□□ -1.47
EBF3Q9H4W6 AC012361.1-201ENST00000447260 1498 ntTSL 1 (best) BASIC5.9□□□□□ -1.47
EBF3Q9H4W6 ZBTB38-202ENST00000441582 3662 ntAPPRIS P1 TSL 2 BASIC5.89□□□□□ -1.47
EBF3Q9H4W6 CYP4Z2P-201ENST00000423332 1512 ntBASIC5.89□□□□□ -1.47
EBF3Q9H4W6 WDR63-202ENST00000326813 2888 ntAPPRIS ALT2 TSL 2 BASIC5.89□□□□□ -1.47
EBF3Q9H4W6 C17orf105-201ENST00000449302 3753 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
EBF3Q9H4W6 NDRG3-202ENST00000359675 2917 ntAPPRIS ALT1 TSL 1 (best) BASIC5.89□□□□□ -1.47
EBF3Q9H4W6 ADAMDEC1-204ENST00000522298 2044 ntAPPRIS ALT2 TSL 2 BASIC5.89□□□□□ -1.47
EBF3Q9H4W6 NOL8-214ENST00000535387 3390 ntAPPRIS ALT2 TSL 5 BASIC5.89□□□□□ -1.47
EBF3Q9H4W6 DLG1-213ENST00000443183 2516 ntTSL 2 BASIC5.89□□□□□ -1.47
EBF3Q9H4W6 PHC3-217ENST00000497658 2087 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
EBF3Q9H4W6 KIAA0586-203ENST00000423743 5339 ntAPPRIS ALT2 TSL 1 (best) BASIC5.89□□□□□ -1.47
EBF3Q9H4W6 METTL6-203ENST00000443029 4020 ntAPPRIS P1 TSL 5 BASIC5.89□□□□□ -1.47
EBF3Q9H4W6 CEP85L-201ENST00000360290 1736 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
EBF3Q9H4W6 FCER1G-201ENST00000289902 591 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
EBF3Q9H4W6 RNU1-19P-201ENST00000363306 165 ntBASIC5.89□□□□□ -1.47
EBF3Q9H4W6 SNORA74A-201ENST00000364089 198 ntBASIC5.89□□□□□ -1.47
EBF3Q9H4W6 MYO3A-202ENST00000376301 727 ntTSL 5 BASIC5.89□□□□□ -1.47
EBF3Q9H4W6 BTBD9-203ENST00000403056 1155 ntTSL 5 BASIC5.89□□□□□ -1.47
EBF3Q9H4W6 SPTLC1P2-201ENST00000407089 121 ntBASIC5.89□□□□□ -1.47
EBF3Q9H4W6 AL355143.1-201ENST00000407101 841 ntBASIC5.89□□□□□ -1.47
EBF3Q9H4W6 NIFKP3-201ENST00000417799 865 ntBASIC5.89□□□□□ -1.47
EBF3Q9H4W6 AL132796.1-201ENST00000421617 479 ntTSL 3 BASIC5.89□□□□□ -1.47
EBF3Q9H4W6 LINC00458-201ENST00000423442 1060 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
EBF3Q9H4W6 OPA1-AS1-201ENST00000433105 492 ntTSL 3 BASIC5.89□□□□□ -1.47
EBF3Q9H4W6 TMEM196-204ENST00000433641 768 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
EBF3Q9H4W6 AL590399.4-201ENST00000436561 601 ntBASIC5.89□□□□□ -1.47
EBF3Q9H4W6 AL355306.2-209ENST00000437803 357 ntTSL 2 BASIC5.89□□□□□ -1.47
EBF3Q9H4W6 LINC01344-202ENST00000449842 571 ntTSL 3 BASIC5.89□□□□□ -1.47
EBF3Q9H4W6 AC098826.2-201ENST00000452011 651 ntBASIC5.89□□□□□ -1.47
EBF3Q9H4W6 AKR1C2-203ENST00000455190 1098 ntTSL 2 BASIC5.89□□□□□ -1.47
EBF3Q9H4W6 AC068633.1-202ENST00000476460 458 ntTSL 2 BASIC5.89□□□□□ -1.47
EBF3Q9H4W6 AC015908.1-201ENST00000478739 476 ntBASIC5.89□□□□□ -1.47
EBF3Q9H4W6 LINC02040-201ENST00000481004 556 ntTSL 5 BASIC5.89□□□□□ -1.47
EBF3Q9H4W6 AC105460.2-202ENST00000502936 825 ntTSL 2 BASIC5.89□□□□□ -1.47
EBF3Q9H4W6 CCDC169-211ENST00000503173 837 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
EBF3Q9H4W6 OR5M14P-201ENST00000506803 618 ntBASIC5.89□□□□□ -1.47
EBF3Q9H4W6 WASHC5-AS1-201ENST00000519140 587 ntTSL 4 BASIC5.89□□□□□ -1.47
EBF3Q9H4W6 AC090109.1-201ENST00000548885 819 ntTSL 3 BASIC5.89□□□□□ -1.47
EBF3Q9H4W6 MRPS21P7-201ENST00000566937 238 ntBASIC5.89□□□□□ -1.47
EBF3Q9H4W6 AC005856.1-201ENST00000585921 286 ntTSL 3 BASIC5.89□□□□□ -1.47
EBF3Q9H4W6 AC092944.2-201ENST00000605443 889 ntBASIC5.89□□□□□ -1.47
EBF3Q9H4W6 AC010245.2-201ENST00000606908 1167 ntBASIC5.89□□□□□ -1.47
EBF3Q9H4W6 AC084782.3-201ENST00000612282 578 ntBASIC5.89□□□□□ -1.47
EBF3Q9H4W6 AC022960.3-201ENST00000619794 441 ntBASIC5.89□□□□□ -1.47
EBF3Q9H4W6 AC091046.2-201ENST00000620775 665 ntBASIC5.89□□□□□ -1.47
EBF3Q9H4W6 AC018445.2-201ENST00000622987 260 ntBASIC5.89□□□□□ -1.47
EBF3Q9H4W6 AL358975.1-202ENST00000628133 589 ntTSL 5 BASIC5.89□□□□□ -1.47
EBF3Q9H4W6 FBXL21-201ENST00000297158 1305 ntBASIC5.89□□□□□ -1.47
EBF3Q9H4W6 EEF1A1P30-201ENST00000429708 1315 ntBASIC5.89□□□□□ -1.47
EBF3Q9H4W6 AC109780.1-201ENST00000451768 1344 ntBASIC5.89□□□□□ -1.47
EBF3Q9H4W6 MTCO1P22-201ENST00000604619 1360 ntBASIC5.89□□□□□ -1.47
EBF3Q9H4W6 LRRK2-201ENST00000298910 9158 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
EBF3Q9H4W6 IFIT1B-201ENST00000371809 1972 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
EBF3Q9H4W6 ZMAT1-201ENST00000372782 3185 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
EBF3Q9H4W6 OR2AT4-204ENST00000641593 8733 ntAPPRIS P1 BASIC5.89□□□□□ -1.47
EBF3Q9H4W6 FTO-203ENST00000460382 1517 ntTSL 5 BASIC5.89□□□□□ -1.47
EBF3Q9H4W6 ZNF615-213ENST00000602063 4094 ntAPPRIS P3 TSL 5 BASIC5.89□□□□□ -1.47
EBF3Q9H4W6 RAPGEF4-203ENST00000397087 4120 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
EBF3Q9H4W6 PDE5A-203ENST00000394439 6770 ntAPPRIS ALT2 TSL 5 BASIC5.88□□□□□ -1.47
EBF3Q9H4W6 WDR12-201ENST00000261015 8100 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
EBF3Q9H4W6 DLGAP5-202ENST00000395425 2954 ntAPPRIS ALT2 TSL 1 (best) BASIC5.88□□□□□ -1.47
EBF3Q9H4W6 FASTKD3-201ENST00000264669 2402 ntAPPRIS P1 TSL 2 BASIC5.88□□□□□ -1.47
EBF3Q9H4W6 LINC01676-202ENST00000435253 1849 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
EBF3Q9H4W6 NBPF20-205ENST00000622803 3689 ntTSL 5 BASIC5.88□□□□□ -1.47
EBF3Q9H4W6 OR8H1-201ENST00000313022 1038 ntAPPRIS P2 BASIC5.88□□□□□ -1.47
EBF3Q9H4W6 RNA5SP319-201ENST00000362768 119 ntBASIC5.88□□□□□ -1.47
EBF3Q9H4W6 RNA5SP234-201ENST00000363916 119 ntBASIC5.88□□□□□ -1.47
EBF3Q9H4W6 SNORA58B-201ENST00000364259 136 ntBASIC5.88□□□□□ -1.47
EBF3Q9H4W6 ATP5F1P6-201ENST00000402768 767 ntBASIC5.88□□□□□ -1.47
EBF3Q9H4W6 MIR1286-201ENST00000408112 78 ntBASIC5.88□□□□□ -1.47
EBF3Q9H4W6 RNU4-34P-201ENST00000410431 124 ntBASIC5.88□□□□□ -1.47
EBF3Q9H4W6 AL445190.1-201ENST00000416448 288 ntTSL 5 BASIC5.88□□□□□ -1.47
EBF3Q9H4W6 MAGI2-AS3-204ENST00000426835 738 ntTSL 3 BASIC5.88□□□□□ -1.47
EBF3Q9H4W6 GUSBP6-201ENST00000434932 640 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
EBF3Q9H4W6 MTND4P15-201ENST00000437913 1033 ntBASIC5.88□□□□□ -1.47
EBF3Q9H4W6 AL353764.1-201ENST00000442072 474 ntTSL 2 BASIC5.88□□□□□ -1.47
EBF3Q9H4W6 LINC01133-202ENST00000443364 1266 ntTSL 5 BASIC5.88□□□□□ -1.47
EBF3Q9H4W6 AC009487.1-201ENST00000444164 403 ntTSL 3 BASIC5.88□□□□□ -1.47
EBF3Q9H4W6 OFD1P3Y-201ENST00000453312 783 ntBASIC5.88□□□□□ -1.47
EBF3Q9H4W6 LINC01075-201ENST00000455977 370 ntTSL 3 BASIC5.88□□□□□ -1.47
EBF3Q9H4W6 AC004129.2-201ENST00000457229 287 ntBASIC5.88□□□□□ -1.47
EBF3Q9H4W6 AC073610.1-201ENST00000489971 396 ntBASIC5.88□□□□□ -1.47
EBF3Q9H4W6 INPP4B-206ENST00000506217 673 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
EBF3Q9H4W6 LINC02231-201ENST00000510459 447 ntTSL 3 BASIC5.88□□□□□ -1.47
EBF3Q9H4W6 MEF2C-AS1-208ENST00000512585 741 ntTSL 5 BASIC5.88□□□□□ -1.47
EBF3Q9H4W6 LINC01216-201ENST00000515728 824 ntTSL 5 BASIC5.88□□□□□ -1.47
EBF3Q9H4W6 RNA5SP92-201ENST00000516437 110 ntBASIC5.88□□□□□ -1.47
EBF3Q9H4W6 AP001372.4-201ENST00000524889 472 ntBASIC5.88□□□□□ -1.47
EBF3Q9H4W6 OR4R2P-201ENST00000530815 597 ntBASIC5.88□□□□□ -1.47
EBF3Q9H4W6 HNF1A-AS1-203ENST00000537361 659 ntTSL 3 BASIC5.88□□□□□ -1.47
EBF3Q9H4W6 AC090680.2-201ENST00000550279 742 ntTSL 3 BASIC5.88□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 86 ms