Protein–RNA interactions for Protein: Q9BSH5

HDHD3, Haloacid dehalogenase-like hydrolase domain-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 251 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDHD3Q9BSH5 PMCHL1-204ENST00000430902 659 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
HDHD3Q9BSH5 Z84478.1-201ENST00000438230 1219 ntBASIC4.46□□□□□ -1.7
HDHD3Q9BSH5 SUMO2P3-201ENST00000438311 288 ntBASIC4.46□□□□□ -1.7
HDHD3Q9BSH5 GK-IT1-201ENST00000441146 397 ntTSL 5 BASIC4.46□□□□□ -1.7
HDHD3Q9BSH5 FLJ27354-202ENST00000443562 770 ntTSL 3 BASIC4.46□□□□□ -1.7
HDHD3Q9BSH5 AC013733.1-201ENST00000449835 985 ntTSL 4 BASIC4.46□□□□□ -1.7
HDHD3Q9BSH5 GAPDHP14-201ENST00000450472 937 ntBASIC4.46□□□□□ -1.7
HDHD3Q9BSH5 AL672138.1-201ENST00000450604 1015 ntBASIC4.46□□□□□ -1.7
HDHD3Q9BSH5 OR2A1-AS1-202ENST00000467944 422 ntBASIC4.46□□□□□ -1.7
HDHD3Q9BSH5 AC090589.1-201ENST00000473109 362 ntBASIC4.46□□□□□ -1.7
HDHD3Q9BSH5 COX6B1P2-201ENST00000489624 230 ntBASIC4.46□□□□□ -1.7
HDHD3Q9BSH5 RPS24P16-201ENST00000497294 392 ntBASIC4.46□□□□□ -1.7
HDHD3Q9BSH5 RPS26P24-201ENST00000497656 331 ntBASIC4.46□□□□□ -1.7
HDHD3Q9BSH5 MORF4L2P1-201ENST00000503761 858 ntBASIC4.46□□□□□ -1.7
HDHD3Q9BSH5 AC004069.1-201ENST00000504082 549 ntTSL 4 BASIC4.46□□□□□ -1.7
HDHD3Q9BSH5 AC104078.2-201ENST00000504344 541 ntTSL 5 BASIC4.46□□□□□ -1.7
HDHD3Q9BSH5 GYPB-213ENST00000513128 360 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
HDHD3Q9BSH5 RNA5SP473-201ENST00000516402 125 ntBASIC4.46□□□□□ -1.7
HDHD3Q9BSH5 IGKV2-4-201ENST00000523070 340 ntBASIC4.46□□□□□ -1.7
HDHD3Q9BSH5 AC109466.1-202ENST00000523648 748 ntTSL 3 BASIC4.46□□□□□ -1.7
HDHD3Q9BSH5 AC073569.1-201ENST00000548469 667 ntTSL 2 BASIC4.46□□□□□ -1.7
HDHD3Q9BSH5 AL138974.1-201ENST00000551227 741 ntTSL 5 BASIC4.46□□□□□ -1.7
HDHD3Q9BSH5 AL132800.1-201ENST00000555109 698 ntTSL 5 BASIC4.46□□□□□ -1.7
HDHD3Q9BSH5 AL161752.1-201ENST00000557721 263 ntTSL 2 BASIC4.46□□□□□ -1.7
HDHD3Q9BSH5 AC027808.1-201ENST00000560873 683 ntTSL 3 BASIC4.46□□□□□ -1.7
HDHD3Q9BSH5 AP005901.4-201ENST00000577336 569 ntBASIC4.46□□□□□ -1.7
HDHD3Q9BSH5 AC016839.1-201ENST00000578162 867 ntBASIC4.46□□□□□ -1.7
HDHD3Q9BSH5 AC090227.1-201ENST00000590532 936 ntAPPRIS P1 TSL 5 BASIC4.46□□□□□ -1.7
HDHD3Q9BSH5 AC107993.1-201ENST00000591343 684 ntBASIC4.46□□□□□ -1.7
HDHD3Q9BSH5 AC010487.1-201ENST00000594408 1172 ntBASIC4.46□□□□□ -1.7
HDHD3Q9BSH5 AC079315.1-201ENST00000602952 623 ntBASIC4.46□□□□□ -1.7
HDHD3Q9BSH5 Z98949.1-220ENST00000609809 804 ntTSL 5 BASIC4.46□□□□□ -1.7
HDHD3Q9BSH5 AC092574.2-201ENST00000631198 753 ntTSL 3 BASIC4.46□□□□□ -1.7
HDHD3Q9BSH5 RFC1-217ENST00000639695 867 ntTSL 5 BASIC4.46□□□□□ -1.7
HDHD3Q9BSH5 LTN1-202ENST00000389194 7749 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
HDHD3Q9BSH5 ZEB1-219ENST00000560721 3368 ntAPPRIS ALT2 TSL 2 BASIC4.46□□□□□ -1.7
HDHD3Q9BSH5 RCOR3-201ENST00000367005 4246 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
HDHD3Q9BSH5 TRPC4-203ENST00000358477 2955 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
HDHD3Q9BSH5 LINC01902-203ENST00000637369 7356 ntTSL 5 BASIC4.46□□□□□ -1.7
HDHD3Q9BSH5 TRPC4-204ENST00000379673 2760 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
HDHD3Q9BSH5 SCN1A-201ENST00000303395 8533 ntAPPRIS ALT1 TSL 5 BASIC4.46□□□□□ -1.7
HDHD3Q9BSH5 PRPF4B-201ENST00000337659 4415 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
HDHD3Q9BSH5 AC104623.2-202ENST00000623477 4002 ntBASIC4.45□□□□□ -1.7
HDHD3Q9BSH5 ENPP2-207ENST00000522167 1695 ntTSL 2 BASIC4.45□□□□□ -1.7
HDHD3Q9BSH5 BBX-206ENST00000415149 8930 ntAPPRIS P3 TSL 1 (best) BASIC4.45□□□□□ -1.7
HDHD3Q9BSH5 PSG7-201ENST00000406070 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC4.45□□□□□ -1.7
HDHD3Q9BSH5 EMSY-206ENST00000525038 4376 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
HDHD3Q9BSH5 CLDND1-208ENST00000503004 2818 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
HDHD3Q9BSH5 KRTAP23-1-201ENST00000334160 211 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
HDHD3Q9BSH5 MAX-203ENST00000341653 330 ntTSL 2 BASIC4.45□□□□□ -1.7
HDHD3Q9BSH5 OR52B6-201ENST00000345043 1008 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
HDHD3Q9BSH5 RNU4-2-201ENST00000365668 141 ntBASIC4.45□□□□□ -1.7
HDHD3Q9BSH5 G6PC2-202ENST00000375363 1214 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
HDHD3Q9BSH5 AL133388.1-201ENST00000404509 287 ntBASIC4.45□□□□□ -1.7
HDHD3Q9BSH5 AC211486.3-201ENST00000412694 621 ntBASIC4.45□□□□□ -1.7
HDHD3Q9BSH5 GABARAPL3-201ENST00000412799 354 ntBASIC4.45□□□□□ -1.7
HDHD3Q9BSH5 MIRLET7DHG-201ENST00000416309 1294 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
HDHD3Q9BSH5 RANP7-201ENST00000418085 644 ntBASIC4.45□□□□□ -1.7
HDHD3Q9BSH5 AL513188.1-201ENST00000421167 614 ntTSL 3 BASIC4.45□□□□□ -1.7
HDHD3Q9BSH5 AL162430.2-201ENST00000422306 435 ntTSL 3 BASIC4.45□□□□□ -1.7
HDHD3Q9BSH5 BX119321.1-201ENST00000428912 797 ntBASIC4.45□□□□□ -1.7
HDHD3Q9BSH5 AL353693.1-201ENST00000429567 442 ntTSL 3 BASIC4.45□□□□□ -1.7
HDHD3Q9BSH5 AC060234.3-201ENST00000430438 559 ntTSL 5 BASIC4.45□□□□□ -1.7
HDHD3Q9BSH5 AC046176.1-201ENST00000435260 1170 ntBASIC4.45□□□□□ -1.7
HDHD3Q9BSH5 VAV3-AS1-201ENST00000438318 619 ntTSL 2 BASIC4.45□□□□□ -1.7
HDHD3Q9BSH5 AF064858.2-201ENST00000440714 292 ntTSL 3 BASIC4.45□□□□□ -1.7
HDHD3Q9BSH5 AL034380.1-201ENST00000448791 306 ntTSL 3 BASIC4.45□□□□□ -1.7
HDHD3Q9BSH5 TRAPPC2-204ENST00000458511 678 ntTSL 5 BASIC4.45□□□□□ -1.7
HDHD3Q9BSH5 AC005165.2-201ENST00000466070 380 ntBASIC4.45□□□□□ -1.7
HDHD3Q9BSH5 AC022133.1-201ENST00000490961 571 ntBASIC4.45□□□□□ -1.7
HDHD3Q9BSH5 AC114954.1-201ENST00000506656 820 ntTSL 3 BASIC4.45□□□□□ -1.7
HDHD3Q9BSH5 SEMA6A-AS1-202ENST00000508424 862 ntTSL 3 BASIC4.45□□□□□ -1.7
HDHD3Q9BSH5 LINC00992-202ENST00000514186 564 ntTSL 5 BASIC4.45□□□□□ -1.7
HDHD3Q9BSH5 ANAPC15-205ENST00000535503 734 ntAPPRIS P3 TSL 3 BASIC4.45□□□□□ -1.7
HDHD3Q9BSH5 AC078878.1-201ENST00000539832 958 ntBASIC4.45□□□□□ -1.7
HDHD3Q9BSH5 AC079600.1-201ENST00000550326 297 ntBASIC4.45□□□□□ -1.7
HDHD3Q9BSH5 AC021483.1-201ENST00000560760 539 ntTSL 3 BASIC4.45□□□□□ -1.7
HDHD3Q9BSH5 AC113208.4-201ENST00000563568 206 ntTSL 3 BASIC4.45□□□□□ -1.7
HDHD3Q9BSH5 LINC02137-203ENST00000567448 930 ntTSL 5 BASIC4.45□□□□□ -1.7
HDHD3Q9BSH5 THCAT158-201ENST00000575039 535 ntTSL 5 BASIC4.45□□□□□ -1.7
HDHD3Q9BSH5 UBA2-208ENST00000592791 910 ntTSL 2 BASIC4.45□□□□□ -1.7
HDHD3Q9BSH5 AC097467.3-209ENST00000595760 615 ntTSL 5 BASIC4.45□□□□□ -1.7
HDHD3Q9BSH5 AL138895.2-201ENST00000603019 178 ntBASIC4.45□□□□□ -1.7
HDHD3Q9BSH5 MIR6071-201ENST00000616741 78 ntBASIC4.45□□□□□ -1.7
HDHD3Q9BSH5 PXT1-202ENST00000619547 619 ntAPPRIS ALT2 TSL 1 (best) BASIC4.45□□□□□ -1.7
HDHD3Q9BSH5 AC132068.1-201ENST00000623805 459 ntBASIC4.45□□□□□ -1.7
HDHD3Q9BSH5 MTCO1P1-201ENST00000624263 1081 ntBASIC4.45□□□□□ -1.7
HDHD3Q9BSH5 IGLV10-54-202ENST00000640991 351 ntTSL 5 BASIC4.45□□□□□ -1.7
HDHD3Q9BSH5 AL596275.2-207ENST00000641188 675 ntBASIC4.45□□□□□ -1.7
HDHD3Q9BSH5 THAP12P5-201ENST00000405864 2275 ntBASIC4.45□□□□□ -1.7
HDHD3Q9BSH5 MTUS1-201ENST00000262102 6160 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
HDHD3Q9BSH5 AC133552.1-201ENST00000569988 4007 ntBASIC4.45□□□□□ -1.7
HDHD3Q9BSH5 CDC5L-201ENST00000371477 6423 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
HDHD3Q9BSH5 GABRG1-201ENST00000295452 6785 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
HDHD3Q9BSH5 AC023421.1-201ENST00000590535 1785 ntBASIC4.45□□□□□ -1.7
HDHD3Q9BSH5 RPGRIP1L-212ENST00000621565 6038 ntAPPRIS ALT1 TSL 1 (best) BASIC4.45□□□□□ -1.7
HDHD3Q9BSH5 AP002512.4-201ENST00000641310 4672 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
HDHD3Q9BSH5 AL158064.2-203ENST00000639897 2003 ntTSL 5 BASIC4.45□□□□□ -1.7
HDHD3Q9BSH5 MECOM-201ENST00000264674 4900 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
HDHD3Q9BSH5 GABRG2-202ENST00000361925 3767 ntTSL 3 BASIC4.44□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 89.8 ms