Protein–RNA interactions for Protein: Q99909

SSX3, Protein SSX3, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX3Q99909 AC092865.4-201ENST00000477936 615 ntBASIC4.92□□□□□ -1.62
SSX3Q99909 AC093890.1-201ENST00000502554 540 ntBASIC4.92□□□□□ -1.62
SSX3Q99909 HAUS1P1-201ENST00000505275 832 ntBASIC4.92□□□□□ -1.62
SSX3Q99909 AC025458.1-201ENST00000506046 166 ntBASIC4.92□□□□□ -1.62
SSX3Q99909 GLUD1P3-202ENST00000508551 200 ntBASIC4.92□□□□□ -1.62
SSX3Q99909 ST13P12-201ENST00000508958 1094 ntBASIC4.92□□□□□ -1.62
SSX3Q99909 AC090568.1-201ENST00000509499 856 ntBASIC4.92□□□□□ -1.62
SSX3Q99909 AC115622.1-201ENST00000509628 587 ntTSL 3 BASIC4.92□□□□□ -1.62
SSX3Q99909 RNA5SP340-201ENST00000517132 107 ntBASIC4.92□□□□□ -1.62
SSX3Q99909 TRIM77BP-201ENST00000524985 1119 ntBASIC4.92□□□□□ -1.62
SSX3Q99909 GPRC5D-AS1-208ENST00000545914 566 ntTSL 3 BASIC4.92□□□□□ -1.62
SSX3Q99909 AL591770.1-201ENST00000554475 1131 ntTSL 3 BASIC4.92□□□□□ -1.62
SSX3Q99909 LINC00929-203ENST00000556213 713 ntTSL 2 BASIC4.92□□□□□ -1.62
SSX3Q99909 AC073964.1-201ENST00000558938 308 ntTSL 3 BASIC4.92□□□□□ -1.62
SSX3Q99909 AC009087.1-201ENST00000561827 369 ntTSL 3 BASIC4.92□□□□□ -1.62
SSX3Q99909 AC127024.4-201ENST00000585212 308 ntTSL 5 BASIC4.92□□□□□ -1.62
SSX3Q99909 AC004448.4-204ENST00000585389 743 ntTSL 5 BASIC4.92□□□□□ -1.62
SSX3Q99909 AL136084.2-213ENST00000585704 690 ntTSL 5 BASIC4.92□□□□□ -1.62
SSX3Q99909 AL136084.2-212ENST00000589976 654 ntTSL 5 BASIC4.92□□□□□ -1.62
SSX3Q99909 AC024075.3-201ENST00000601687 453 ntTSL 5 BASIC4.92□□□□□ -1.62
SSX3Q99909 KATNBL1P1-201ENST00000605192 748 ntBASIC4.92□□□□□ -1.62
SSX3Q99909 AC141002.1-201ENST00000607025 279 ntBASIC4.92□□□□□ -1.62
SSX3Q99909 AC096708.4-201ENST00000620563 552 ntBASIC4.92□□□□□ -1.62
SSX3Q99909 AL137067.2-201ENST00000621202 131 ntBASIC4.92□□□□□ -1.62
SSX3Q99909 AL161457.2-201ENST00000629181 630 ntTSL 5 BASIC4.92□□□□□ -1.62
SSX3Q99909 LYRM2-208ENST00000523377 5353 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
SSX3Q99909 KCNJ10-205ENST00000638728 4351 ntAPPRIS P1 TSL 5 BASIC4.92□□□□□ -1.62
SSX3Q99909 ATP1B4-201ENST00000218008 3868 ntAPPRIS ALT1 TSL 1 (best) BASIC4.92□□□□□ -1.62
SSX3Q99909 OTUD4-202ENST00000454497 7069 ntTSL 2 BASIC4.92□□□□□ -1.62
SSX3Q99909 THAP6-202ENST00000380837 3423 ntAPPRIS ALT2 TSL 1 (best) BASIC4.92□□□□□ -1.62
SSX3Q99909 ELAVL4-205ENST00000371824 3966 ntAPPRIS P5 TSL 1 (best) BASIC4.92□□□□□ -1.62
SSX3Q99909 C6orf163-202ENST00000388923 1308 ntAPPRIS P1 TSL 5 BASIC4.92□□□□□ -1.62
SSX3Q99909 LINC01355-201ENST00000566551 5444 ntBASIC4.92□□□□□ -1.62
SSX3Q99909 MIA3-203ENST00000344922 8142 ntAPPRIS P2 TSL 5 BASIC4.92□□□□□ -1.62
SSX3Q99909 CLCA1-202ENST00000394711 3118 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
SSX3Q99909 AP001029.2-203ENST00000589795 4910 ntBASIC4.92□□□□□ -1.62
SSX3Q99909 AMN1-208ENST00000537562 1538 ntTSL 5 BASIC4.92□□□□□ -1.62
SSX3Q99909 LINC01189-201ENST00000428440 3321 ntTSL 2 BASIC4.92□□□□□ -1.62
SSX3Q99909 ZNF729-201ENST00000601693 3877 ntAPPRIS P1 TSL 2 BASIC4.92□□□□□ -1.62
SSX3Q99909 HYDIN-201ENST00000288168 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC4.92□□□□□ -1.62
SSX3Q99909 PARD3B-212ENST00000613457 7559 ntTSL 5 BASIC4.91□□□□□ -1.62
SSX3Q99909 POLE2-206ENST00000554396 1581 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
SSX3Q99909 ZMYM6-201ENST00000317538 2702 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
SSX3Q99909 DST-202ENST00000312431 17756 ntAPPRIS P2 TSL 5 BASIC4.91□□□□□ -1.62
SSX3Q99909 ZNF112-202ENST00000354340 3654 ntAPPRIS P3 TSL 1 (best) BASIC4.91□□□□□ -1.62
SSX3Q99909 LPAR4-205ENST00000614823 2155 ntAPPRIS P1 TSL 4 BASIC4.91□□□□□ -1.62
SSX3Q99909 NOVA1-213ENST00000574031 1431 ntTSL 2 BASIC4.91□□□□□ -1.62
SSX3Q99909 OR5B12-202ENST00000641921 1807 ntAPPRIS P1 BASIC4.91□□□□□ -1.62
SSX3Q99909 CACNB4-221ENST00000636130 7748 ntTSL 5 BASIC4.91□□□□□ -1.62
SSX3Q99909 OR8U1-201ENST00000302270 930 ntAPPRIS P1 BASIC4.91□□□□□ -1.62
SSX3Q99909 OR5B12-201ENST00000302572 1054 ntAPPRIS P1 BASIC4.91□□□□□ -1.62
SSX3Q99909 SUGT1P2-201ENST00000379452 992 ntBASIC4.91□□□□□ -1.62
SSX3Q99909 HMGN1P20-201ENST00000411849 300 ntBASIC4.91□□□□□ -1.62
SSX3Q99909 AC079809.1-201ENST00000415468 276 ntBASIC4.91□□□□□ -1.62
SSX3Q99909 AC068286.1-201ENST00000416173 467 ntTSL 4 BASIC4.91□□□□□ -1.62
SSX3Q99909 ODF2-AS1-201ENST00000420801 407 ntTSL 3 BASIC4.91□□□□□ -1.62
SSX3Q99909 AC066692.1-201ENST00000421721 457 ntBASIC4.91□□□□□ -1.62
SSX3Q99909 OR5M12P-201ENST00000423388 929 ntBASIC4.91□□□□□ -1.62
SSX3Q99909 TAB2-AS1-201ENST00000424421 730 ntTSL 5 BASIC4.91□□□□□ -1.62
SSX3Q99909 RNF19BPX-201ENST00000426224 625 ntBASIC4.91□□□□□ -1.62
SSX3Q99909 AC068631.1-204ENST00000428501 534 ntTSL 3 BASIC4.91□□□□□ -1.62
SSX3Q99909 AC108051.1-201ENST00000435291 549 ntTSL 3 BASIC4.91□□□□□ -1.62
SSX3Q99909 MTCYBP29-201ENST00000436327 1006 ntBASIC4.91□□□□□ -1.62
SSX3Q99909 AC005077.1-201ENST00000449226 375 ntBASIC4.91□□□□□ -1.62
SSX3Q99909 TMSB4X-204ENST00000451311 628 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
SSX3Q99909 AC144530.1-201ENST00000452862 555 ntBASIC4.91□□□□□ -1.62
SSX3Q99909 IQCJ-SCHIP1-AS1-201ENST00000460574 508 ntTSL 3 BASIC4.91□□□□□ -1.62
SSX3Q99909 CRNDE-201ENST00000501177 614 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
SSX3Q99909 PCNAP1-201ENST00000505363 709 ntBASIC4.91□□□□□ -1.62
SSX3Q99909 AL133372.2-203ENST00000508469 922 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
SSX3Q99909 OCIAD1-216ENST00000509122 1204 ntTSL 5 BASIC4.91□□□□□ -1.62
SSX3Q99909 OR56A7P-201ENST00000524865 941 ntBASIC4.91□□□□□ -1.62
SSX3Q99909 CRYAB-205ENST00000526180 1017 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
SSX3Q99909 OR8A2P-201ENST00000528631 952 ntBASIC4.91□□□□□ -1.62
SSX3Q99909 AP002383.3-201ENST00000545958 593 ntTSL 4 BASIC4.91□□□□□ -1.62
SSX3Q99909 AL355075.2-201ENST00000555435 478 ntTSL 2 BASIC4.91□□□□□ -1.62
SSX3Q99909 AC138907.7-201ENST00000568972 358 ntTSL 5 BASIC4.91□□□□□ -1.62
SSX3Q99909 STARD6-202ENST00000577499 696 ntTSL 2 BASIC4.91□□□□□ -1.62
SSX3Q99909 MIR3189-201ENST00000578735 73 ntBASIC4.91□□□□□ -1.62
SSX3Q99909 AC011476.3-202ENST00000586845 553 ntTSL 3 BASIC4.91□□□□□ -1.62
SSX3Q99909 AC090236.2-201ENST00000587933 1101 ntBASIC4.91□□□□□ -1.62
SSX3Q99909 ZNF738-205ENST00000597810 747 ntAPPRIS ALT2 TSL 3 BASIC4.91□□□□□ -1.62
SSX3Q99909 AC008750.7-201ENST00000600765 559 ntTSL 4 BASIC4.91□□□□□ -1.62
SSX3Q99909 LINC00458-206ENST00000607494 849 ntTSL 3 BASIC4.91□□□□□ -1.62
SSX3Q99909 ATL2-217ENST00000629272 1242 ntTSL 5 BASIC4.91□□□□□ -1.62
SSX3Q99909 HNMT-202ENST00000280097 3295 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
SSX3Q99909 ADGRL3-217ENST00000514591 6297 ntAPPRIS P2 TSL 5 BASIC4.91□□□□□ -1.62
SSX3Q99909 ING3-205ENST00000445699 1723 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
SSX3Q99909 AJ009632.2-202ENST00000634644 1513 ntTSL 5 BASIC4.91□□□□□ -1.62
SSX3Q99909 ZNF440-201ENST00000304060 4189 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
SSX3Q99909 F9-201ENST00000218099 2780 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
SSX3Q99909 MYBPC1-214ENST00000549145 4031 ntAPPRIS ALT2 TSL 5 BASIC4.91□□□□□ -1.62
SSX3Q99909 PIGA-206ENST00000542278 3626 ntAPPRIS P1 TSL 5 BASIC4.91□□□□□ -1.62
SSX3Q99909 KDM4C-214ENST00000536108 3406 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
SSX3Q99909 AP002001.1-201ENST00000526101 1759 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
SSX3Q99909 FOXP2-209ENST00000393498 2617 ntTSL 5 BASIC4.91□□□□□ -1.62
SSX3Q99909 ADAM21-201ENST00000603540 2658 ntAPPRIS P1 TSL 3 BASIC4.9□□□□□ -1.62
SSX3Q99909 LGI1-212ENST00000630184 2936 ntTSL 2 BASIC4.9□□□□□ -1.62
SSX3Q99909 ARHGAP18-201ENST00000368149 4462 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.62
SSX3Q99909 AC007342.7-201ENST00000624610 2337 ntBASIC4.9□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 151.8 ms