Protein–RNA interactions for Protein: Q96RL7

VPS13A, Vacuolar protein sorting-associated protein 13A, humanhuman

Predictions only

Length 3,174 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13AQ96RL7 AC122688.1-201ENST00000541494 223 ntBASIC5□□□□□ -1.61
VPS13AQ96RL7 MIR7515HG-226ENST00000588330 1055 ntTSL 5 BASIC5□□□□□ -1.61
VPS13AQ96RL7 KIF1B-201ENST00000263934 6816 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
VPS13AQ96RL7 AASDH-210ENST00000602986 3480 ntTSL 5 BASIC4.99□□□□□ -1.61
VPS13AQ96RL7 ZNF286A-202ENST00000395894 5443 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
VPS13AQ96RL7 AP004147.1-201ENST00000505153 6314 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
VPS13AQ96RL7 EDA2R-203ENST00000396050 3429 ntAPPRIS ALT2 TSL 5 BASIC4.99□□□□□ -1.61
VPS13AQ96RL7 ABCA4-201ENST00000370225 7309 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
VPS13AQ96RL7 SYT14-206ENST00000537238 5208 ntAPPRIS ALT2 TSL 5 BASIC4.99□□□□□ -1.61
VPS13AQ96RL7 TBCK-205ENST00000432496 3362 ntAPPRIS P1 TSL 2 BASIC4.99□□□□□ -1.61
VPS13AQ96RL7 CDH7-201ENST00000323011 2728 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
VPS13AQ96RL7 STXBP5-AS1-204ENST00000431143 644 ntTSL 3 BASIC4.99□□□□□ -1.61
VPS13AQ96RL7 AC017002.1-201ENST00000432268 881 ntTSL 5 BASIC4.99□□□□□ -1.61
VPS13AQ96RL7 AC004824.1-201ENST00000439577 311 ntTSL 5 BASIC4.99□□□□□ -1.61
VPS13AQ96RL7 AL162419.1-201ENST00000440674 873 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
VPS13AQ96RL7 RPL23AP93-201ENST00000440847 484 ntBASIC4.99□□□□□ -1.61
VPS13AQ96RL7 CEACAMP6-201ENST00000452007 574 ntBASIC4.99□□□□□ -1.61
VPS13AQ96RL7 MEMO1P4-201ENST00000453590 386 ntBASIC4.99□□□□□ -1.61
VPS13AQ96RL7 AC092754.1-201ENST00000472975 479 ntBASIC4.99□□□□□ -1.61
VPS13AQ96RL7 AC010255.3-204ENST00000514637 454 ntTSL 2 BASIC4.99□□□□□ -1.61
VPS13AQ96RL7 ELSPBP1-205ENST00000597519 557 ntTSL 3 BASIC4.99□□□□□ -1.61
VPS13AQ96RL7 AL356056.1-205ENST00000608904 651 ntTSL 5 BASIC4.99□□□□□ -1.61
VPS13AQ96RL7 AL445465.1-206ENST00000609544 528 ntTSL 5 BASIC4.99□□□□□ -1.61
VPS13AQ96RL7 B4GALNT2-202ENST00000393354 8657 ntAPPRIS ALT2 TSL 1 (best) BASIC4.99□□□□□ -1.61
VPS13AQ96RL7 BIVM-ERCC5-201ENST00000602836 5143 ntAPPRIS P5 TSL 1 (best) BASIC4.99□□□□□ -1.61
VPS13AQ96RL7 ASB14-201ENST00000389601 3175 ntAPPRIS ALT2 TSL 5 BASIC4.99□□□□□ -1.61
VPS13AQ96RL7 OR4F13P-202ENST00000560066 2054 ntBASIC4.99□□□□□ -1.61
VPS13AQ96RL7 EXOC5-211ENST00000621441 10589 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
VPS13AQ96RL7 MITF-203ENST00000328528 4680 ntTSL 5 BASIC4.99□□□□□ -1.61
VPS13AQ96RL7 FAM184A-212ENST00000522284 2721 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
VPS13AQ96RL7 CPEB2-AS1-202ENST00000501916 1806 ntTSL 2 BASIC4.99□□□□□ -1.61
VPS13AQ96RL7 MYO5A-209ENST00000553916 5989 ntTSL 5 BASIC4.99□□□□□ -1.61
VPS13AQ96RL7 BDNF-211ENST00000439476 4532 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
VPS13AQ96RL7 SAMD13-202ENST00000370669 856 ntAPPRIS P1 TSL 3 BASIC4.99□□□□□ -1.61
VPS13AQ96RL7 LINC01291-202ENST00000418204 441 ntTSL 5 BASIC4.99□□□□□ -1.61
VPS13AQ96RL7 AL645608.4-201ENST00000423619 154 ntBASIC4.99□□□□□ -1.61
VPS13AQ96RL7 C6orf52-203ENST00000426700 493 ntAPPRIS P2 TSL 2 BASIC4.99□□□□□ -1.61
VPS13AQ96RL7 ATP5J2-209ENST00000488775 306 ntTSL 2 BASIC4.99□□□□□ -1.61
VPS13AQ96RL7 AC068397.1-201ENST00000560337 531 ntTSL 2 BASIC4.99□□□□□ -1.61
VPS13AQ96RL7 MIR8089-201ENST00000620165 82 ntBASIC4.99□□□□□ -1.61
VPS13AQ96RL7 PRICKLE1-202ENST00000445766 4075 ntAPPRIS P1 TSL 5 BASIC4.99□□□□□ -1.61
VPS13AQ96RL7 C12orf50-201ENST00000298699 1722 ntAPPRIS P1 TSL 2 BASIC4.99□□□□□ -1.61
VPS13AQ96RL7 GPRIN3-201ENST00000333209 6260 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
VPS13AQ96RL7 Z99129.3-201ENST00000624363 6430 ntTSL 2 BASIC4.99□□□□□ -1.61
VPS13AQ96RL7 DNAJB4-201ENST00000370763 2988 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
VPS13AQ96RL7 AC068446.1-201ENST00000556425 1549 ntBASIC4.99□□□□□ -1.61
VPS13AQ96RL7 ZNF782-208ENST00000535338 3296 ntAPPRIS P1 TSL 3 BASIC4.99□□□□□ -1.61
VPS13AQ96RL7 NAT1-210ENST00000545197 1827 ntTSL 5 BASIC4.99□□□□□ -1.61
VPS13AQ96RL7 AC092378.1-202ENST00000500117 2296 ntTSL 2 BASIC4.99□□□□□ -1.61
VPS13AQ96RL7 SESN1-201ENST00000302071 2718 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
VPS13AQ96RL7 KIF13A-203ENST00000378814 6924 ntAPPRIS ALT2 TSL 1 (best) BASIC4.98□□□□□ -1.61
VPS13AQ96RL7 VNN3-207ENST00000425515 1761 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
VPS13AQ96RL7 LARS-201ENST00000274562 2213 ntTSL 2 BASIC4.98□□□□□ -1.61
VPS13AQ96RL7 LTBP1-204ENST00000407925 5087 ntAPPRIS ALT2 TSL 1 (best) BASIC4.98□□□□□ -1.61
VPS13AQ96RL7 ZBTB40-201ENST00000374651 8368 ntAPPRIS ALT2 TSL 1 (best) BASIC4.98□□□□□ -1.61
VPS13AQ96RL7 CYP1D1P-201ENST00000416662 1433 ntBASIC4.98□□□□□ -1.61
VPS13AQ96RL7 INTS6-AS1-201ENST00000434512 466 ntTSL 3 BASIC4.98□□□□□ -1.61
VPS13AQ96RL7 EIF4E-204ENST00000504432 1132 ntTSL 5 BASIC4.98□□□□□ -1.61
VPS13AQ96RL7 AP000919.3-201ENST00000582591 568 ntTSL 3 BASIC4.98□□□□□ -1.61
VPS13AQ96RL7 SLC8A1-AS1-218ENST00000610721 956 ntTSL 5 BASIC4.98□□□□□ -1.61
VPS13AQ96RL7 AC074101.1-201ENST00000637861 241 ntBASIC4.98□□□□□ -1.61
VPS13AQ96RL7 ZCCHC6-201ENST00000277141 5724 ntTSL 2 BASIC4.98□□□□□ -1.61
VPS13AQ96RL7 PAK3-202ENST00000360648 2241 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
VPS13AQ96RL7 AC090826.1-202ENST00000562009 3337 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
VPS13AQ96RL7 NAIP-201ENST00000194097 6088 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
VPS13AQ96RL7 MS4A1-207ENST00000532073 2560 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
VPS13AQ96RL7 C18orf32-203ENST00000613385 5395 ntAPPRIS P1 TSL 2 BASIC4.98□□□□□ -1.61
VPS13AQ96RL7 COMMD6-204ENST00000377619 594 ntTSL 2 BASIC4.98□□□□□ -1.61
VPS13AQ96RL7 RPS3AP25-201ENST00000411660 793 ntBASIC4.98□□□□□ -1.61
VPS13AQ96RL7 TTC3-AS1-201ENST00000424733 1097 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
VPS13AQ96RL7 LINC01014-203ENST00000455307 548 ntTSL 2 BASIC4.98□□□□□ -1.61
VPS13AQ96RL7 LINC02050-201ENST00000473938 712 ntTSL 3 BASIC4.98□□□□□ -1.61
VPS13AQ96RL7 SLC48A1-205ENST00000547002 751 ntTSL 3 BASIC4.98□□□□□ -1.61
VPS13AQ96RL7 AC008814.1-201ENST00000603797 406 ntBASIC4.98□□□□□ -1.61
VPS13AQ96RL7 NSD2-207ENST00000398261 8390 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
VPS13AQ96RL7 PDE6A-204ENST00000613228 5398 ntTSL 5 BASIC4.98□□□□□ -1.61
VPS13AQ96RL7 MEF2C-226ENST00000625674 4343 ntAPPRIS P3 TSL 5 BASIC4.98□□□□□ -1.61
VPS13AQ96RL7 GNG2-212ENST00000556752 3424 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
VPS13AQ96RL7 RNU6-761P-201ENST00000384148 107 ntBASIC4.98□□□□□ -1.61
VPS13AQ96RL7 AL607077.1-201ENST00000401718 499 ntBASIC4.98□□□□□ -1.61
VPS13AQ96RL7 GAPDHP49-201ENST00000421421 961 ntBASIC4.98□□□□□ -1.61
VPS13AQ96RL7 AL807757.1-201ENST00000437846 424 ntTSL 3 BASIC4.98□□□□□ -1.61
VPS13AQ96RL7 AC096759.1-201ENST00000510744 473 ntTSL 3 BASIC4.98□□□□□ -1.61
VPS13AQ96RL7 ENPP7P9-201ENST00000514456 627 ntBASIC4.98□□□□□ -1.61
VPS13AQ96RL7 SNORA67.7-201ENST00000516664 135 ntBASIC4.98□□□□□ -1.61
VPS13AQ96RL7 AC017100.2-201ENST00000584628 355 ntBASIC4.98□□□□□ -1.61
VPS13AQ96RL7 AC013731.1-201ENST00000604340 883 ntBASIC4.98□□□□□ -1.61
VPS13AQ96RL7 CASC19-284ENST00000642142 1868 ntBASIC4.98□□□□□ -1.61
VPS13AQ96RL7 DNAJC16-202ENST00000375847 6069 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
VPS13AQ96RL7 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC4.97□□□□□ -1.61
VPS13AQ96RL7 OR52B5P-204ENST00000641744 3467 ntBASIC4.97□□□□□ -1.61
VPS13AQ96RL7 MAP3K2-201ENST00000344908 2135 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
VPS13AQ96RL7 DCTN4-201ENST00000424236 4054 ntTSL 2 BASIC4.97□□□□□ -1.61
VPS13AQ96RL7 NBEA-207ENST00000537702 4089 ntTSL 2 BASIC4.97□□□□□ -1.61
VPS13AQ96RL7 OLFM3-201ENST00000338858 2189 ntAPPRIS ALT1 TSL 1 (best) BASIC4.97□□□□□ -1.61
VPS13AQ96RL7 TRAV26-2-201ENST00000390460 327 ntAPPRIS P1 BASIC4.97□□□□□ -1.61
VPS13AQ96RL7 AL021331.1-201ENST00000402817 582 ntBASIC4.97□□□□□ -1.61
VPS13AQ96RL7 AL136084.2-202ENST00000433997 353 ntTSL 2 BASIC4.97□□□□□ -1.61
VPS13AQ96RL7 AC079080.1-201ENST00000479841 822 ntBASIC4.97□□□□□ -1.61
VPS13AQ96RL7 OR7E128P-201ENST00000532736 1024 ntBASIC4.97□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 74.4 ms