Protein–RNA interactions for Protein: Q96JB5

CDK5RAP3, CDK5 regulatory subunit-associated protein 3, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3Q96JB5 ZNF160-203ENST00000429604 4336 ntAPPRIS P1 TSL 3 BASIC6.54□□□□□ -1.36
CDK5RAP3Q96JB5 MATR3-230ENST00000394800 5513 ntTSL 5 BASIC6.54□□□□□ -1.36
CDK5RAP3Q96JB5 TCP1P3-201ENST00000414406 1498 ntBASIC6.53□□□□□ -1.36
CDK5RAP3Q96JB5 RXFP1-203ENST00000343542 2130 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
CDK5RAP3Q96JB5 KYNUP3-201ENST00000574386 1341 ntBASIC6.53□□□□□ -1.36
CDK5RAP3Q96JB5 ZNF33B-208ENST00000613419 5843 ntAPPRIS ALT2 TSL 5 BASIC6.53□□□□□ -1.36
CDK5RAP3Q96JB5 PHTF2-207ENST00000424760 1977 ntTSL 2 BASIC6.53□□□□□ -1.36
CDK5RAP3Q96JB5 SERPINB7-207ENST00000546027 1951 ntAPPRIS P1 TSL 2 BASIC6.53□□□□□ -1.36
CDK5RAP3Q96JB5 UGT2B24P-201ENST00000514441 1597 ntBASIC6.53□□□□□ -1.36
CDK5RAP3Q96JB5 SERPINB7-202ENST00000398019 2203 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
CDK5RAP3Q96JB5 PI15-202ENST00000523773 1413 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
CDK5RAP3Q96JB5 RWDD2A-201ENST00000369724 3744 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
CDK5RAP3Q96JB5 PDE5A-203ENST00000394439 6770 ntAPPRIS ALT2 TSL 5 BASIC6.53□□□□□ -1.36
CDK5RAP3Q96JB5 NCOA1-206ENST00000407230 4745 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
CDK5RAP3Q96JB5 OR5M8-201ENST00000327216 1047 ntAPPRIS P1 BASIC6.53□□□□□ -1.36
CDK5RAP3Q96JB5 YAF2-202ENST00000380790 1211 ntTSL 2 BASIC6.53□□□□□ -1.36
CDK5RAP3Q96JB5 SNORD65-201ENST00000391079 73 ntBASIC6.53□□□□□ -1.36
CDK5RAP3Q96JB5 RNASE11-202ENST00000398009 1034 ntAPPRIS P2 TSL 5 BASIC6.53□□□□□ -1.36
CDK5RAP3Q96JB5 AC073641.1-201ENST00000425192 429 ntTSL 3 BASIC6.53□□□□□ -1.36
CDK5RAP3Q96JB5 AL590399.2-201ENST00000427536 309 ntBASIC6.53□□□□□ -1.36
CDK5RAP3Q96JB5 AC008063.2-201ENST00000432251 619 ntTSL 2 BASIC6.53□□□□□ -1.36
CDK5RAP3Q96JB5 AL512661.1-201ENST00000434586 1253 ntBASIC6.53□□□□□ -1.36
CDK5RAP3Q96JB5 NDUFS5P5-201ENST00000437256 321 ntBASIC6.53□□□□□ -1.36
CDK5RAP3Q96JB5 AC019117.1-202ENST00000439046 589 ntTSL 3 BASIC6.53□□□□□ -1.36
CDK5RAP3Q96JB5 AL645931.1-201ENST00000439737 410 ntBASIC6.53□□□□□ -1.36
CDK5RAP3Q96JB5 CD200R1-203ENST00000440122 847 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
CDK5RAP3Q96JB5 MEMO1P4-201ENST00000453590 386 ntBASIC6.53□□□□□ -1.36
CDK5RAP3Q96JB5 AC093166.4-201ENST00000457867 318 ntBASIC6.53□□□□□ -1.36
CDK5RAP3Q96JB5 RN7SL205P-201ENST00000490174 284 ntBASIC6.53□□□□□ -1.36
CDK5RAP3Q96JB5 AC021087.2-201ENST00000504656 1203 ntBASIC6.53□□□□□ -1.36
CDK5RAP3Q96JB5 AC105384.2-201ENST00000508433 640 ntBASIC6.53□□□□□ -1.36
CDK5RAP3Q96JB5 UGT2A3P7-201ENST00000510485 734 ntBASIC6.53□□□□□ -1.36
CDK5RAP3Q96JB5 AC027701.1-201ENST00000520155 823 ntTSL 3 BASIC6.53□□□□□ -1.36
CDK5RAP3Q96JB5 MS4A1-205ENST00000528313 928 ntTSL 2 BASIC6.53□□□□□ -1.36
CDK5RAP3Q96JB5 PPFIA2-AS1-202ENST00000549161 1080 ntTSL 3 BASIC6.53□□□□□ -1.36
CDK5RAP3Q96JB5 LINC02258-201ENST00000551280 777 ntTSL 2 BASIC6.53□□□□□ -1.36
CDK5RAP3Q96JB5 AC091078.2-201ENST00000557145 559 ntBASIC6.53□□□□□ -1.36
CDK5RAP3Q96JB5 AL356801.1-201ENST00000559320 294 ntBASIC6.53□□□□□ -1.36
CDK5RAP3Q96JB5 AC109460.2-201ENST00000569974 544 ntTSL 3 BASIC6.53□□□□□ -1.36
CDK5RAP3Q96JB5 AC087301.1-201ENST00000579037 321 ntTSL 3 BASIC6.53□□□□□ -1.36
CDK5RAP3Q96JB5 MIR4260-201ENST00000583107 67 ntBASIC6.53□□□□□ -1.36
CDK5RAP3Q96JB5 AL157392.3-211ENST00000599378 509 ntTSL 4 BASIC6.53□□□□□ -1.36
CDK5RAP3Q96JB5 AC079315.1-201ENST00000602952 623 ntBASIC6.53□□□□□ -1.36
CDK5RAP3Q96JB5 AL138895.2-201ENST00000603019 178 ntBASIC6.53□□□□□ -1.36
CDK5RAP3Q96JB5 MTCO3P22-201ENST00000603219 784 ntBASIC6.53□□□□□ -1.36
CDK5RAP3Q96JB5 AC067773.1-201ENST00000603284 1094 ntBASIC6.53□□□□□ -1.36
CDK5RAP3Q96JB5 AC090912.3-201ENST00000609775 533 ntBASIC6.53□□□□□ -1.36
CDK5RAP3Q96JB5 AC091046.2-201ENST00000620775 665 ntBASIC6.53□□□□□ -1.36
CDK5RAP3Q96JB5 AC068880.4-201ENST00000623082 495 ntBASIC6.53□□□□□ -1.36
CDK5RAP3Q96JB5 AC010608.3-201ENST00000625048 527 ntBASIC6.53□□□□□ -1.36
CDK5RAP3Q96JB5 ATM-229ENST00000639953 587 ntTSL 5 BASIC6.53□□□□□ -1.36
CDK5RAP3Q96JB5 LRRC37A3-204ENST00000400877 3273 ntTSL 2 BASIC6.53□□□□□ -1.36
CDK5RAP3Q96JB5 UGT2A1-206ENST00000514019 2376 ntTSL 2 BASIC6.53□□□□□ -1.36
CDK5RAP3Q96JB5 NBPF19-201ENST00000369227 3670 ntTSL 5 BASIC6.53□□□□□ -1.36
CDK5RAP3Q96JB5 NBPF20-203ENST00000594479 3670 ntTSL 5 BASIC6.53□□□□□ -1.36
CDK5RAP3Q96JB5 NBPF14-210ENST00000621066 3670 ntTSL 5 BASIC6.53□□□□□ -1.36
CDK5RAP3Q96JB5 TCF7L2-222ENST00000627217 3680 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
CDK5RAP3Q96JB5 AL360270.2-201ENST00000562952 5985 ntBASIC6.53□□□□□ -1.36
CDK5RAP3Q96JB5 ADAM21-201ENST00000603540 2658 ntAPPRIS P1 TSL 3 BASIC6.53□□□□□ -1.36
CDK5RAP3Q96JB5 LINC01524-201ENST00000428009 4390 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
CDK5RAP3Q96JB5 RRP15-201ENST00000366932 7771 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
CDK5RAP3Q96JB5 EOGT-208ENST00000540764 1584 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.36
CDK5RAP3Q96JB5 BACH1-201ENST00000286800 5669 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.36
CDK5RAP3Q96JB5 ANKRD46-204ENST00000519597 2779 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
CDK5RAP3Q96JB5 AC117409.1-201ENST00000470499 1310 ntBASIC6.52□□□□□ -1.37
CDK5RAP3Q96JB5 ACADSB-201ENST00000358776 5859 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
CDK5RAP3Q96JB5 MTCO1P4-201ENST00000520516 1409 ntBASIC6.52□□□□□ -1.37
CDK5RAP3Q96JB5 RGSL1-201ENST00000294854 3696 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
CDK5RAP3Q96JB5 AC097063.1-201ENST00000426714 1797 ntBASIC6.52□□□□□ -1.37
CDK5RAP3Q96JB5 CYP3A43-201ENST00000222382 1515 ntAPPRIS P4 TSL 1 (best) BASIC6.52□□□□□ -1.37
CDK5RAP3Q96JB5 MMP12-201ENST00000571244 1874 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
CDK5RAP3Q96JB5 PIGA-206ENST00000542278 3626 ntAPPRIS P1 TSL 5 BASIC6.52□□□□□ -1.37
CDK5RAP3Q96JB5 OR4S2-201ENST00000312422 936 ntAPPRIS P1 BASIC6.52□□□□□ -1.37
CDK5RAP3Q96JB5 BPY2-201ENST00000331070 1206 ntAPPRIS P5 TSL 1 (best) BASIC6.52□□□□□ -1.37
CDK5RAP3Q96JB5 SPINK14-201ENST00000356972 294 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
CDK5RAP3Q96JB5 RPS24-201ENST00000360830 514 ntAPPRIS ALT1 TSL 1 (best) BASIC6.52□□□□□ -1.37
CDK5RAP3Q96JB5 RN7SKP275-201ENST00000364626 301 ntBASIC6.52□□□□□ -1.37
CDK5RAP3Q96JB5 RN7SKP78-201ENST00000364711 318 ntBASIC6.52□□□□□ -1.37
CDK5RAP3Q96JB5 TEX36-201ENST00000368821 922 ntAPPRIS P3 TSL 1 (best) BASIC6.52□□□□□ -1.37
CDK5RAP3Q96JB5 BPY2C-201ENST00000382287 1206 ntAPPRIS P5 TSL 1 (best) BASIC6.52□□□□□ -1.37
CDK5RAP3Q96JB5 BPY2B-201ENST00000382392 1206 ntAPPRIS P5 TSL 1 (best) BASIC6.52□□□□□ -1.37
CDK5RAP3Q96JB5 RNU6-1000P-201ENST00000391066 106 ntBASIC6.52□□□□□ -1.37
CDK5RAP3Q96JB5 RN7SKP29-201ENST00000410957 272 ntBASIC6.52□□□□□ -1.37
CDK5RAP3Q96JB5 RNU2-22P-201ENST00000411266 212 ntBASIC6.52□□□□□ -1.37
CDK5RAP3Q96JB5 AL356476.1-201ENST00000421481 480 ntTSL 5 BASIC6.52□□□□□ -1.37
CDK5RAP3Q96JB5 VN1R21P-201ENST00000426703 765 ntBASIC6.52□□□□□ -1.37
CDK5RAP3Q96JB5 FGF12-202ENST00000430714 603 ntTSL 2 BASIC6.52□□□□□ -1.37
CDK5RAP3Q96JB5 AC106053.1-201ENST00000431697 368 ntTSL 3 BASIC6.52□□□□□ -1.37
CDK5RAP3Q96JB5 MIR99AHG-205ENST00000435697 716 ntTSL 2 BASIC6.52□□□□□ -1.37
CDK5RAP3Q96JB5 AC012368.1-201ENST00000438115 552 ntTSL 3 BASIC6.52□□□□□ -1.37
CDK5RAP3Q96JB5 KRT8P51-201ENST00000438938 274 ntBASIC6.52□□□□□ -1.37
CDK5RAP3Q96JB5 CASP12-207ENST00000447913 819 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
CDK5RAP3Q96JB5 CASP12-208ENST00000448103 1071 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
CDK5RAP3Q96JB5 GAS5-218ENST00000448718 565 ntTSL 2 BASIC6.52□□□□□ -1.37
CDK5RAP3Q96JB5 FRG2FP-204ENST00000453982 852 ntBASIC6.52□□□□□ -1.37
CDK5RAP3Q96JB5 AL023584.2-201ENST00000454411 444 ntTSL 5 BASIC6.52□□□□□ -1.37
CDK5RAP3Q96JB5 LINC01448-201ENST00000455947 1171 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
CDK5RAP3Q96JB5 AC068756.1-201ENST00000482003 403 ntTSL 2 BASIC6.52□□□□□ -1.37
CDK5RAP3Q96JB5 NPM1P29-201ENST00000483112 803 ntBASIC6.52□□□□□ -1.37
CDK5RAP3Q96JB5 LINC00483-204ENST00000502517 940 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 183.8 ms