Protein–RNA interactions for Protein: Q8WW32

HMGB4, High mobility group protein B4, humanhuman

Predictions only

Length 186 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB4Q8WW32 TRPC5OS-201ENST00000371970 2806 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
HMGB4Q8WW32 AQP9-202ENST00000536493 2803 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
HMGB4Q8WW32 URI1-201ENST00000360605 1579 ntAPPRIS ALT2 TSL 1 (best) BASIC5.85□□□□□ -1.47
HMGB4Q8WW32 CDKL4-201ENST00000378803 1567 ntAPPRIS P2 TSL 1 (best) BASIC5.85□□□□□ -1.47
HMGB4Q8WW32 CARD6-201ENST00000254691 4221 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
HMGB4Q8WW32 CDON-206ENST00000531738 5803 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
HMGB4Q8WW32 THRB-203ENST00000396671 7506 ntAPPRIS P2 TSL 5 BASIC5.85□□□□□ -1.47
HMGB4Q8WW32 RLN1-201ENST00000223862 967 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
HMGB4Q8WW32 RAD1P1-201ENST00000231383 813 ntBASIC5.85□□□□□ -1.47
HMGB4Q8WW32 SPINK7-201ENST00000274565 557 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
HMGB4Q8WW32 CFAP97-201ENST00000296775 903 ntTSL 5 BASIC5.85□□□□□ -1.47
HMGB4Q8WW32 OR14A16-201ENST00000357627 930 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
HMGB4Q8WW32 LEMD1-203ENST00000367152 741 ntTSL 2 BASIC5.85□□□□□ -1.47
HMGB4Q8WW32 MRRF-207ENST00000373729 870 ntTSL 3 BASIC5.85□□□□□ -1.47
HMGB4Q8WW32 RNU6-171P-201ENST00000384354 107 ntBASIC5.85□□□□□ -1.47
HMGB4Q8WW32 AL359636.2-201ENST00000412262 259 ntTSL 3 BASIC5.85□□□□□ -1.47
HMGB4Q8WW32 GSTM2-205ENST00000414179 982 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
HMGB4Q8WW32 MTCYBP7-201ENST00000419540 1134 ntBASIC5.85□□□□□ -1.47
HMGB4Q8WW32 AL360093.1-201ENST00000420237 1126 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
HMGB4Q8WW32 RPS12P17-201ENST00000438591 377 ntBASIC5.85□□□□□ -1.47
HMGB4Q8WW32 LINC01986-201ENST00000440867 590 ntTSL 5 BASIC5.85□□□□□ -1.47
HMGB4Q8WW32 RNFT1P2-201ENST00000443064 757 ntBASIC5.85□□□□□ -1.47
HMGB4Q8WW32 AC239798.3-201ENST00000454459 408 ntBASIC5.85□□□□□ -1.47
HMGB4Q8WW32 AC092691.2-201ENST00000461787 803 ntBASIC5.85□□□□□ -1.47
HMGB4Q8WW32 AL157777.1-201ENST00000468100 304 ntBASIC5.85□□□□□ -1.47
HMGB4Q8WW32 PFN1P6-201ENST00000476786 399 ntBASIC5.85□□□□□ -1.47
HMGB4Q8WW32 AC068756.1-201ENST00000482003 403 ntTSL 2 BASIC5.85□□□□□ -1.47
HMGB4Q8WW32 AC008410.1-201ENST00000483777 339 ntBASIC5.85□□□□□ -1.47
HMGB4Q8WW32 UBA52P7-201ENST00000486088 380 ntBASIC5.85□□□□□ -1.47
HMGB4Q8WW32 OR5M14P-201ENST00000506803 618 ntBASIC5.85□□□□□ -1.47
HMGB4Q8WW32 AC021192.1-201ENST00000510169 791 ntTSL 3 BASIC5.85□□□□□ -1.47
HMGB4Q8WW32 MRPS16P1-201ENST00000523462 412 ntBASIC5.85□□□□□ -1.47
HMGB4Q8WW32 LINC01947-201ENST00000523742 566 ntTSL 4 BASIC5.85□□□□□ -1.47
HMGB4Q8WW32 AP001318.3-202ENST00000528876 509 ntTSL 3 BASIC5.85□□□□□ -1.47
HMGB4Q8WW32 AC134775.1-201ENST00000531268 464 ntTSL 2 BASIC5.85□□□□□ -1.47
HMGB4Q8WW32 OR4A40P-201ENST00000533878 948 ntBASIC5.85□□□□□ -1.47
HMGB4Q8WW32 LINC00933-205ENST00000560917 449 ntTSL 3 BASIC5.85□□□□□ -1.47
HMGB4Q8WW32 AC044860.2-201ENST00000561005 179 ntBASIC5.85□□□□□ -1.47
HMGB4Q8WW32 AC007494.1-201ENST00000562293 760 ntBASIC5.85□□□□□ -1.47
HMGB4Q8WW32 RBM22P12-201ENST00000567098 1255 ntBASIC5.85□□□□□ -1.47
HMGB4Q8WW32 AL359715.3-201ENST00000569267 2123 ntBASIC5.85□□□□□ -1.47
HMGB4Q8WW32 OR1AB1P-201ENST00000585564 761 ntBASIC5.85□□□□□ -1.47
HMGB4Q8WW32 ZNF208-204ENST00000599916 740 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
HMGB4Q8WW32 AC097504.2-201ENST00000608088 454 ntBASIC5.85□□□□□ -1.47
HMGB4Q8WW32 AC104763.3-201ENST00000613765 618 ntBASIC5.85□□□□□ -1.47
HMGB4Q8WW32 AC018926.1-201ENST00000616335 435 ntBASIC5.85□□□□□ -1.47
HMGB4Q8WW32 Metazoa_SRP.43-201ENST00000616394 271 ntBASIC5.85□□□□□ -1.47
HMGB4Q8WW32 AC241377.1-201ENST00000619797 406 ntBASIC5.85□□□□□ -1.47
HMGB4Q8WW32 AC092159.4-201ENST00000624944 550 ntBASIC5.85□□□□□ -1.47
HMGB4Q8WW32 LINC02019-201ENST00000608605 2060 ntBASIC5.85□□□□□ -1.47
HMGB4Q8WW32 AC007842.1-201ENST00000597336 2039 ntBASIC5.85□□□□□ -1.47
HMGB4Q8WW32 SERPINB7-207ENST00000546027 1951 ntAPPRIS P1 TSL 2 BASIC5.85□□□□□ -1.47
HMGB4Q8WW32 AL355306.2-206ENST00000635233 1903 ntTSL 5 BASIC5.85□□□□□ -1.47
HMGB4Q8WW32 TTC41P-205ENST00000551270 3963 ntBASIC5.85□□□□□ -1.47
HMGB4Q8WW32 AFP-202ENST00000395792 2484 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
HMGB4Q8WW32 NAV1-201ENST00000367295 11645 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
HMGB4Q8WW32 MDN1-205ENST00000629399 17400 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
HMGB4Q8WW32 ZSCAN26-201ENST00000316606 2362 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
HMGB4Q8WW32 KIN-201ENST00000379562 6348 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
HMGB4Q8WW32 ECT2L-203ENST00000423192 4319 ntAPPRIS P1 TSL 5 BASIC5.85□□□□□ -1.47
HMGB4Q8WW32 LINGO2-204ENST00000613945 2981 ntAPPRIS P1 TSL 5 BASIC5.85□□□□□ -1.47
HMGB4Q8WW32 AC092378.1-202ENST00000500117 2296 ntTSL 2 BASIC5.85□□□□□ -1.47
HMGB4Q8WW32 BANK1-206ENST00000504592 3544 ntTSL 2 BASIC5.85□□□□□ -1.47
HMGB4Q8WW32 FMN1-212ENST00000616417 13529 ntAPPRIS ALT2 TSL 5 BASIC5.84□□□□□ -1.47
HMGB4Q8WW32 GTF2IP4-201ENST00000453092 2054 ntBASIC5.84□□□□□ -1.47
HMGB4Q8WW32 C1orf140-202ENST00000439004 4340 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
HMGB4Q8WW32 ESRRG-204ENST00000361525 5363 ntAPPRIS P1 TSL 5 BASIC5.84□□□□□ -1.47
HMGB4Q8WW32 LINC01787-201ENST00000435311 1994 ntTSL 2 BASIC5.84□□□□□ -1.47
HMGB4Q8WW32 AASDH-203ENST00000502617 3004 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
HMGB4Q8WW32 ASAH1-232ENST00000636691 2472 ntTSL 5 BASIC5.84□□□□□ -1.47
HMGB4Q8WW32 VEZT-204ENST00000436874 4562 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
HMGB4Q8WW32 ZNF679-201ENST00000255746 1297 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
HMGB4Q8WW32 AP000568.1-201ENST00000282964 442 ntBASIC5.84□□□□□ -1.47
HMGB4Q8WW32 CFHR2-201ENST00000367415 1059 ntAPPRIS P2 TSL 1 (best) BASIC5.84□□□□□ -1.47
HMGB4Q8WW32 BX248415.1-201ENST00000367421 1043 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
HMGB4Q8WW32 RSL24D1P1-201ENST00000404972 493 ntBASIC5.84□□□□□ -1.47
HMGB4Q8WW32 SPTLC1P2-201ENST00000407089 121 ntBASIC5.84□□□□□ -1.47
HMGB4Q8WW32 RNU4-34P-201ENST00000410431 124 ntBASIC5.84□□□□□ -1.47
HMGB4Q8WW32 DPPA2P3-201ENST00000411853 655 ntBASIC5.84□□□□□ -1.47
HMGB4Q8WW32 AC069282.1-201ENST00000411911 526 ntBASIC5.84□□□□□ -1.47
HMGB4Q8WW32 LINC00161-201ENST00000412526 870 ntTSL 2 BASIC5.84□□□□□ -1.47
HMGB4Q8WW32 AL357752.1-201ENST00000412817 349 ntBASIC5.84□□□□□ -1.47
HMGB4Q8WW32 MAGI2-AS3-204ENST00000426835 738 ntTSL 3 BASIC5.84□□□□□ -1.47
HMGB4Q8WW32 AL139280.1-201ENST00000436340 463 ntTSL 3 BASIC5.84□□□□□ -1.47
HMGB4Q8WW32 LINC02038-201ENST00000439074 702 ntTSL 4 BASIC5.84□□□□□ -1.47
HMGB4Q8WW32 AC009487.1-201ENST00000444164 403 ntTSL 3 BASIC5.84□□□□□ -1.47
HMGB4Q8WW32 RPL23AP23-201ENST00000452590 471 ntBASIC5.84□□□□□ -1.47
HMGB4Q8WW32 CLIC4P1-201ENST00000453177 535 ntBASIC5.84□□□□□ -1.47
HMGB4Q8WW32 FRG2FP-204ENST00000453982 852 ntBASIC5.84□□□□□ -1.47
HMGB4Q8WW32 AC002075.1-201ENST00000457396 676 ntBASIC5.84□□□□□ -1.47
HMGB4Q8WW32 OR2AO1P-201ENST00000476497 403 ntBASIC5.84□□□□□ -1.47
HMGB4Q8WW32 RN7SL165P-201ENST00000477476 291 ntBASIC5.84□□□□□ -1.47
HMGB4Q8WW32 AC098583.1-201ENST00000480875 255 ntBASIC5.84□□□□□ -1.47
HMGB4Q8WW32 RPL32P9-201ENST00000487963 407 ntBASIC5.84□□□□□ -1.47
HMGB4Q8WW32 LINC02006-201ENST00000488210 524 ntTSL 4 BASIC5.84□□□□□ -1.47
HMGB4Q8WW32 RN7SL547P-201ENST00000490793 290 ntBASIC5.84□□□□□ -1.47
HMGB4Q8WW32 RPL17P2-201ENST00000491913 451 ntBASIC5.84□□□□□ -1.47
HMGB4Q8WW32 AC009120.1-201ENST00000493458 473 ntBASIC5.84□□□□□ -1.47
HMGB4Q8WW32 AC007370.1-201ENST00000503163 316 ntTSL 2 BASIC5.84□□□□□ -1.47
HMGB4Q8WW32 AC093801.2-201ENST00000503966 1050 ntBASIC5.84□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 76.9 ms