Protein–RNA interactions for Protein: Q8NHS4

CLHC1, Clathrin heavy chain linker domain-containing protein 1, humanhuman

Predictions only

Length 586 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLHC1Q8NHS4 AC012588.1-201ENST00000583852 358 ntTSL 3 BASIC5.21□□□□□ -1.58
CLHC1Q8NHS4 MIR7853-201ENST00000584820 132 ntBASIC5.21□□□□□ -1.58
CLHC1Q8NHS4 AC015802.3-201ENST00000590241 570 ntTSL 4 BASIC5.21□□□□□ -1.58
CLHC1Q8NHS4 SMIM24-204ENST00000591708 660 ntAPPRIS ALT2 TSL 2 BASIC5.21□□□□□ -1.58
CLHC1Q8NHS4 ZNF667-AS1-207ENST00000592146 668 ntTSL 5 BASIC5.21□□□□□ -1.58
CLHC1Q8NHS4 AC124856.1-201ENST00000600819 896 ntBASIC5.21□□□□□ -1.58
CLHC1Q8NHS4 QTRT1P1-201ENST00000604344 1078 ntBASIC5.21□□□□□ -1.58
CLHC1Q8NHS4 AC092375.1-202ENST00000639452 404 ntTSL 3 BASIC5.21□□□□□ -1.58
CLHC1Q8NHS4 AC008691.1-209ENST00000642094 814 ntBASIC5.21□□□□□ -1.58
CLHC1Q8NHS4 LINC02203-203ENST00000625989 1600 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
CLHC1Q8NHS4 CROT-204ENST00000442291 1993 ntTSL 5 BASIC5.21□□□□□ -1.58
CLHC1Q8NHS4 AC019197.1-201ENST00000638199 3611 ntTSL 5 BASIC5.21□□□□□ -1.58
CLHC1Q8NHS4 EIF3M-208ENST00000531120 5051 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
CLHC1Q8NHS4 ATRX-201ENST00000373344 11220 ntAPPRIS P4 TSL 1 (best) BASIC5.21□□□□□ -1.58
CLHC1Q8NHS4 CRISP1-204ENST00000507853 1793 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
CLHC1Q8NHS4 TMEM161B-211ENST00000512429 1796 ntTSL 2 BASIC5.21□□□□□ -1.58
CLHC1Q8NHS4 FOXP2-202ENST00000360232 1412 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
CLHC1Q8NHS4 PWRN2-202ENST00000567246 4295 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
CLHC1Q8NHS4 SMNDC1-202ENST00000369603 4341 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
CLHC1Q8NHS4 MFAP1-201ENST00000267812 2155 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
CLHC1Q8NHS4 PCDH15-209ENST00000395433 6942 ntTSL 5 BASIC5.2□□□□□ -1.58
CLHC1Q8NHS4 FGF13-202ENST00000315930 19519 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
CLHC1Q8NHS4 IQCH-202ENST00000358767 3062 ntTSL 5 BASIC5.2□□□□□ -1.58
CLHC1Q8NHS4 FANCD2-202ENST00000383807 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC5.2□□□□□ -1.58
CLHC1Q8NHS4 YES1P1-201ENST00000418510 1628 ntBASIC5.2□□□□□ -1.58
CLHC1Q8NHS4 AL157756.1-201ENST00000532515 2859 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
CLHC1Q8NHS4 KDM3B-209ENST00000542866 3634 ntTSL 2 BASIC5.2□□□□□ -1.58
CLHC1Q8NHS4 BTBD10P1-201ENST00000549824 1352 ntBASIC5.2□□□□□ -1.58
CLHC1Q8NHS4 PTCD2-202ENST00000380639 11151 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
CLHC1Q8NHS4 CEP97-201ENST00000341893 8361 ntAPPRIS P3 TSL 1 (best) BASIC5.2□□□□□ -1.58
CLHC1Q8NHS4 DEFB118-201ENST00000253381 1158 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
CLHC1Q8NHS4 CLEC12A-202ENST00000350667 699 ntAPPRIS ALT2 TSL 1 (best) BASIC5.2□□□□□ -1.58
CLHC1Q8NHS4 RNU6-729P-201ENST00000384399 107 ntBASIC5.2□□□□□ -1.58
CLHC1Q8NHS4 RPS3AP2-201ENST00000407190 754 ntBASIC5.2□□□□□ -1.58
CLHC1Q8NHS4 OR6C64P-201ENST00000419708 825 ntBASIC5.2□□□□□ -1.58
CLHC1Q8NHS4 AL133173.1-201ENST00000423458 397 ntBASIC5.2□□□□□ -1.58
CLHC1Q8NHS4 AL136131.2-201ENST00000424283 348 ntTSL 3 BASIC5.2□□□□□ -1.58
CLHC1Q8NHS4 LINC01363-202ENST00000428030 930 ntTSL 3 BASIC5.2□□□□□ -1.58
CLHC1Q8NHS4 AC060234.3-201ENST00000430438 559 ntTSL 5 BASIC5.2□□□□□ -1.58
CLHC1Q8NHS4 ALG13-AS1-201ENST00000430794 195 ntTSL 5 BASIC5.2□□□□□ -1.58
CLHC1Q8NHS4 AC109481.1-201ENST00000509173 282 ntBASIC5.2□□□□□ -1.58
CLHC1Q8NHS4 AC109464.1-201ENST00000511091 819 ntBASIC5.2□□□□□ -1.58
CLHC1Q8NHS4 GYPB-213ENST00000513128 360 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
CLHC1Q8NHS4 SPRY4-AS1-205ENST00000514303 152 ntTSL 3 BASIC5.2□□□□□ -1.58
CLHC1Q8NHS4 AC246817.1-201ENST00000520024 610 ntTSL 3 BASIC5.2□□□□□ -1.58
CLHC1Q8NHS4 AC024405.1-201ENST00000532521 1042 ntBASIC5.2□□□□□ -1.58
CLHC1Q8NHS4 LINC02293-202ENST00000548385 358 ntTSL 3 BASIC5.2□□□□□ -1.58
CLHC1Q8NHS4 AC079950.1-201ENST00000551229 568 ntTSL 4 BASIC5.2□□□□□ -1.58
CLHC1Q8NHS4 AC114947.2-202ENST00000569313 643 ntTSL 3 BASIC5.2□□□□□ -1.58
CLHC1Q8NHS4 MIR4675-201ENST00000577898 77 ntBASIC5.2□□□□□ -1.58
CLHC1Q8NHS4 DPRXP4-201ENST00000578053 568 ntBASIC5.2□□□□□ -1.58
CLHC1Q8NHS4 ERVK-28-203ENST00000600419 457 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
CLHC1Q8NHS4 HCG18-243ENST00000602498 327 ntTSL 3 BASIC5.2□□□□□ -1.58
CLHC1Q8NHS4 AL499605.1-201ENST00000604628 403 ntBASIC5.2□□□□□ -1.58
CLHC1Q8NHS4 PPATP2-201ENST00000605635 508 ntBASIC5.2□□□□□ -1.58
CLHC1Q8NHS4 AL139407.1-201ENST00000613826 1175 ntBASIC5.2□□□□□ -1.58
CLHC1Q8NHS4 AC026367.3-201ENST00000619032 590 ntBASIC5.2□□□□□ -1.58
CLHC1Q8NHS4 MIR193BHG-214ENST00000641765 509 ntBASIC5.2□□□□□ -1.58
CLHC1Q8NHS4 HERC4-205ENST00000412272 4211 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
CLHC1Q8NHS4 GLIPR1L2-202ENST00000378692 1903 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
CLHC1Q8NHS4 MOXD1-201ENST00000336749 2950 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
CLHC1Q8NHS4 VPS50-202ENST00000305866 3613 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
CLHC1Q8NHS4 LMO3-209ENST00000447609 3365 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
CLHC1Q8NHS4 ADAM2-207ENST00000622267 2480 ntAPPRIS ALT2 TSL 2 BASIC5.2□□□□□ -1.58
CLHC1Q8NHS4 CKAP5-202ENST00000354558 6428 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
CLHC1Q8NHS4 AKAP9-201ENST00000356239 12471 ntAPPRIS P2 TSL 1 (best) BASIC5.2□□□□□ -1.58
CLHC1Q8NHS4 SRSF11-201ENST00000370949 3034 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
CLHC1Q8NHS4 PRTG-201ENST00000389286 11967 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
CLHC1Q8NHS4 EIF2AK2-201ENST00000233057 10042 ntAPPRIS P1 TSL 2 BASIC5.2□□□□□ -1.58
CLHC1Q8NHS4 AC079915.1-201ENST00000584382 2780 ntTSL 2 BASIC5.2□□□□□ -1.58
CLHC1Q8NHS4 ODAM-201ENST00000396094 1319 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
CLHC1Q8NHS4 Z83820.1-201ENST00000456978 1499 ntBASIC5.2□□□□□ -1.58
CLHC1Q8NHS4 NPIPB9-201ENST00000357796 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC5.19□□□□□ -1.58
CLHC1Q8NHS4 ABI1-210ENST00000376170 3362 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
CLHC1Q8NHS4 TRIM51GP-201ENST00000534741 1350 ntBASIC5.19□□□□□ -1.58
CLHC1Q8NHS4 DOCK7-211ENST00000634264 6303 ntAPPRIS ALT2 TSL 5 BASIC5.19□□□□□ -1.58
CLHC1Q8NHS4 AC008691.1-207ENST00000636819 4154 ntTSL 5 BASIC5.19□□□□□ -1.58
CLHC1Q8NHS4 RAB18-209ENST00000621805 4894 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
CLHC1Q8NHS4 EPB41L2-226ENST00000530757 4360 ntTSL 2 BASIC5.19□□□□□ -1.58
CLHC1Q8NHS4 WFDC11-201ENST00000324384 614 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
CLHC1Q8NHS4 FHIT-201ENST00000341848 174 ntTSL 3 BASIC5.19□□□□□ -1.58
CLHC1Q8NHS4 SSX5-202ENST00000347757 1261 ntAPPRIS ALT2 TSL 5 BASIC5.19□□□□□ -1.58
CLHC1Q8NHS4 PPCS-201ENST00000372556 984 ntTSL 2 BASIC5.19□□□□□ -1.58
CLHC1Q8NHS4 SSX1-201ENST00000376919 1298 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
CLHC1Q8NHS4 SSX5-203ENST00000376923 1208 ntAPPRIS ALT2 TSL 5 BASIC5.19□□□□□ -1.58
CLHC1Q8NHS4 YAF2-202ENST00000380790 1211 ntTSL 2 BASIC5.19□□□□□ -1.58
CLHC1Q8NHS4 MIR551A-201ENST00000385042 96 ntBASIC5.19□□□□□ -1.58
CLHC1Q8NHS4 RNA5SP241-201ENST00000391326 114 ntBASIC5.19□□□□□ -1.58
CLHC1Q8NHS4 AC003035.1-201ENST00000391359 544 ntTSL 3 BASIC5.19□□□□□ -1.58
CLHC1Q8NHS4 AL358178.1-201ENST00000407698 397 ntBASIC5.19□□□□□ -1.58
CLHC1Q8NHS4 AKR1B10P1-201ENST00000425765 942 ntBASIC5.19□□□□□ -1.58
CLHC1Q8NHS4 BX119321.1-201ENST00000428912 797 ntBASIC5.19□□□□□ -1.58
CLHC1Q8NHS4 AL590999.1-204ENST00000430595 638 ntTSL 3 BASIC5.19□□□□□ -1.58
CLHC1Q8NHS4 AC093581.1-201ENST00000446411 461 ntTSL 2 BASIC5.19□□□□□ -1.58
CLHC1Q8NHS4 RBMY2TP-201ENST00000451162 947 ntBASIC5.19□□□□□ -1.58
CLHC1Q8NHS4 AC073636.1-202ENST00000457756 558 ntTSL 4 BASIC5.19□□□□□ -1.58
CLHC1Q8NHS4 SPRR2F-201ENST00000468739 681 ntAPPRIS P1 TSL 3 BASIC5.19□□□□□ -1.58
CLHC1Q8NHS4 AC093827.1-201ENST00000480094 861 ntBASIC5.19□□□□□ -1.58
CLHC1Q8NHS4 SELENOT-204ENST00000480740 783 ntTSL 3 BASIC5.19□□□□□ -1.58
CLHC1Q8NHS4 AC093890.1-201ENST00000502554 540 ntBASIC5.19□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 77.3 ms