Protein–RNA interactions for Protein: Q8NDV3

SMC1B, Structural maintenance of chromosomes protein 1B, humanhuman

Predictions only

Length 1,235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1BQ8NDV3 RBM22P12-201ENST00000567098 1255 ntBASIC7.09□□□□□ -1.27
SMC1BQ8NDV3 FOPNL-207ENST00000575073 530 ntTSL 2 BASIC7.09□□□□□ -1.27
SMC1BQ8NDV3 MIR5095-201ENST00000578844 88 ntBASIC7.09□□□□□ -1.27
SMC1BQ8NDV3 AC093484.5-201ENST00000585048 304 ntTSL 3 BASIC7.09□□□□□ -1.27
SMC1BQ8NDV3 AL357094.1-201ENST00000603845 844 ntBASIC7.09□□□□□ -1.27
SMC1BQ8NDV3 AL121652.1-201ENST00000608851 448 ntBASIC7.09□□□□□ -1.27
SMC1BQ8NDV3 DUXAP10-204ENST00000612052 616 ntBASIC7.09□□□□□ -1.27
SMC1BQ8NDV3 OR6C71P-202ENST00000641886 1107 ntBASIC7.09□□□□□ -1.27
SMC1BQ8NDV3 ZEB2-244ENST00000638007 9140 ntTSL 5 BASIC7.09□□□□□ -1.27
SMC1BQ8NDV3 RORB-201ENST00000376896 9551 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
SMC1BQ8NDV3 SLC26A5-208ENST00000393730 2498 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
SMC1BQ8NDV3 ADAM5-208ENST00000505455 1998 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
SMC1BQ8NDV3 AC012618.3-205ENST00000637896 1496 ntBASIC7.09□□□□□ -1.27
SMC1BQ8NDV3 CLNK-204ENST00000515667 4180 ntAPPRIS ALT2 TSL 3 BASIC7.09□□□□□ -1.27
SMC1BQ8NDV3 TEX41-207ENST00000445791 4635 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
SMC1BQ8NDV3 OLFM3-201ENST00000338858 2189 ntAPPRIS ALT1 TSL 1 (best) BASIC7.09□□□□□ -1.27
SMC1BQ8NDV3 RABGAP1L-206ENST00000367688 1425 ntTSL 2 BASIC7.09□□□□□ -1.28
SMC1BQ8NDV3 METTL6-203ENST00000443029 4020 ntAPPRIS P1 TSL 5 BASIC7.09□□□□□ -1.28
SMC1BQ8NDV3 LY86-AS1-202ENST00000435641 2819 ntTSL 2 BASIC7.09□□□□□ -1.28
SMC1BQ8NDV3 CCDC125-202ENST00000396496 4198 ntAPPRIS P1 TSL 5 BASIC7.09□□□□□ -1.28
SMC1BQ8NDV3 URI1-201ENST00000360605 1579 ntAPPRIS ALT2 TSL 1 (best) BASIC7.08□□□□□ -1.28
SMC1BQ8NDV3 IL1RL1-202ENST00000311734 3994 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
SMC1BQ8NDV3 RWDD2A-201ENST00000369724 3744 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
SMC1BQ8NDV3 ZC3H11A-201ENST00000332127 5015 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
SMC1BQ8NDV3 LINC01981-201ENST00000432163 2833 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
SMC1BQ8NDV3 CEACAMP10-201ENST00000489959 1721 ntTSL 2 BASIC7.08□□□□□ -1.28
SMC1BQ8NDV3 SPINT4-201ENST00000279058 512 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
SMC1BQ8NDV3 RNA5SP234-201ENST00000363916 119 ntBASIC7.08□□□□□ -1.28
SMC1BQ8NDV3 DEFB133-201ENST00000398721 186 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
SMC1BQ8NDV3 VN1R51P-201ENST00000411675 945 ntBASIC7.08□□□□□ -1.28
SMC1BQ8NDV3 AC025946.1-201ENST00000413286 430 ntTSL 3 BASIC7.08□□□□□ -1.28
SMC1BQ8NDV3 AL606495.1-201ENST00000422100 813 ntBASIC7.08□□□□□ -1.28
SMC1BQ8NDV3 AC113412.1-201ENST00000425840 504 ntBASIC7.08□□□□□ -1.28
SMC1BQ8NDV3 AC013262.1-201ENST00000426710 252 ntBASIC7.08□□□□□ -1.28
SMC1BQ8NDV3 AC007563.3-201ENST00000433233 371 ntBASIC7.08□□□□□ -1.28
SMC1BQ8NDV3 AL512661.1-201ENST00000434586 1253 ntBASIC7.08□□□□□ -1.28
SMC1BQ8NDV3 OR52B5P-201ENST00000435337 951 ntBASIC7.08□□□□□ -1.28
SMC1BQ8NDV3 AC008269.1-201ENST00000438070 646 ntTSL 3 BASIC7.08□□□□□ -1.28
SMC1BQ8NDV3 BX119904.2-201ENST00000446495 512 ntTSL 2 BASIC7.08□□□□□ -1.28
SMC1BQ8NDV3 TMEM247-203ENST00000449601 741 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
SMC1BQ8NDV3 AL451063.1-201ENST00000450164 1133 ntBASIC7.08□□□□□ -1.28
SMC1BQ8NDV3 RPS26P41-201ENST00000450370 284 ntBASIC7.08□□□□□ -1.28
SMC1BQ8NDV3 AL022329.1-203ENST00000453811 451 ntTSL 3 BASIC7.08□□□□□ -1.28
SMC1BQ8NDV3 AC006148.2-201ENST00000467017 650 ntTSL 2 BASIC7.08□□□□□ -1.28
SMC1BQ8NDV3 AC007537.2-201ENST00000472093 511 ntBASIC7.08□□□□□ -1.28
SMC1BQ8NDV3 AC139720.1-201ENST00000509497 512 ntTSL 3 BASIC7.08□□□□□ -1.28
SMC1BQ8NDV3 LINC01030-201ENST00000517505 738 ntTSL 3 BASIC7.08□□□□□ -1.28
SMC1BQ8NDV3 AC079015.1-201ENST00000521793 596 ntTSL 2 BASIC7.08□□□□□ -1.28
SMC1BQ8NDV3 CIR1P1-201ENST00000524055 1133 ntBASIC7.08□□□□□ -1.28
SMC1BQ8NDV3 SNHG1-204ENST00000537068 629 ntTSL 5 BASIC7.08□□□□□ -1.28
SMC1BQ8NDV3 GLRXP2-201ENST00000555594 321 ntBASIC7.08□□□□□ -1.28
SMC1BQ8NDV3 ANKRD20A5P-203ENST00000580200 566 ntTSL 5 BASIC7.08□□□□□ -1.28
SMC1BQ8NDV3 AC104365.1-202ENST00000587080 398 ntTSL 3 BASIC7.08□□□□□ -1.28
SMC1BQ8NDV3 BNIP3P38-201ENST00000601117 544 ntBASIC7.08□□□□□ -1.28
SMC1BQ8NDV3 AC141002.1-201ENST00000607025 279 ntBASIC7.08□□□□□ -1.28
SMC1BQ8NDV3 AC009163.6-201ENST00000612367 342 ntBASIC7.08□□□□□ -1.28
SMC1BQ8NDV3 BNIP3P41-202ENST00000616656 861 ntBASIC7.08□□□□□ -1.28
SMC1BQ8NDV3 CCL4-203ENST00000621626 552 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
SMC1BQ8NDV3 SNHG5-221ENST00000624295 632 ntTSL 5 BASIC7.08□□□□□ -1.28
SMC1BQ8NDV3 OR52B5P-202ENST00000641118 1110 ntBASIC7.08□□□□□ -1.28
SMC1BQ8NDV3 L3MBTL3-209ENST00000533560 3165 ntAPPRIS ALT2 TSL 1 (best) BASIC7.08□□□□□ -1.28
SMC1BQ8NDV3 NRXN1-248ENST00000636345 3595 ntTSL 5 BASIC7.08□□□□□ -1.28
SMC1BQ8NDV3 KCNJ2-201ENST00000243457 5392 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
SMC1BQ8NDV3 MEIOC-202ENST00000409464 4067 ntAPPRIS ALT2 TSL 2 BASIC7.08□□□□□ -1.28
SMC1BQ8NDV3 THRB-203ENST00000396671 7506 ntAPPRIS P2 TSL 5 BASIC7.08□□□□□ -1.28
SMC1BQ8NDV3 AC104024.1-201ENST00000428142 2201 ntTSL 2 BASIC7.08□□□□□ -1.28
SMC1BQ8NDV3 FSHR-202ENST00000406846 2784 ntAPPRIS P4 TSL 1 (best) BASIC7.08□□□□□ -1.28
SMC1BQ8NDV3 CYP3A43-203ENST00000342499 1396 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
SMC1BQ8NDV3 NFE2L2-204ENST00000423513 1382 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
SMC1BQ8NDV3 CAMK2D-202ENST00000342666 1940 ntTSL 5 BASIC7.07□□□□□ -1.28
SMC1BQ8NDV3 CYP2C8-201ENST00000371270 1923 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
SMC1BQ8NDV3 LINC01951-201ENST00000377300 1925 ntTSL 2 BASIC7.07□□□□□ -1.28
SMC1BQ8NDV3 PSMB2-202ENST00000621781 4217 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
SMC1BQ8NDV3 RPGRIP1L-205ENST00000563746 4193 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
SMC1BQ8NDV3 LGALS8-222ENST00000527974 1349 ntAPPRIS P4 TSL 5 BASIC7.07□□□□□ -1.28
SMC1BQ8NDV3 AC119674.1-204ENST00000641348 1343 ntBASIC7.07□□□□□ -1.28
SMC1BQ8NDV3 SP110-202ENST00000258382 2080 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
SMC1BQ8NDV3 NFX1-201ENST00000318524 3513 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
SMC1BQ8NDV3 NDUFS1-205ENST00000449699 2371 ntAPPRIS P1 TSL 2 BASIC7.07□□□□□ -1.28
SMC1BQ8NDV3 SSX3-201ENST00000298396 1232 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
SMC1BQ8NDV3 RRM2B-203ENST00000395912 900 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
SMC1BQ8NDV3 CYB5AP4-201ENST00000396692 399 ntBASIC7.07□□□□□ -1.28
SMC1BQ8NDV3 AC013442.1-201ENST00000397347 228 ntBASIC7.07□□□□□ -1.28
SMC1BQ8NDV3 AL049637.1-201ENST00000424664 503 ntTSL 5 BASIC7.07□□□□□ -1.28
SMC1BQ8NDV3 USP12PY-201ENST00000427677 1064 ntBASIC7.07□□□□□ -1.28
SMC1BQ8NDV3 LINC02532-206ENST00000433965 570 ntTSL 2 BASIC7.07□□□□□ -1.28
SMC1BQ8NDV3 MTND2P2-201ENST00000434633 945 ntBASIC7.07□□□□□ -1.28
SMC1BQ8NDV3 AL139280.1-201ENST00000436340 463 ntTSL 3 BASIC7.07□□□□□ -1.28
SMC1BQ8NDV3 AL353743.2-203ENST00000443630 492 ntTSL 3 BASIC7.07□□□□□ -1.28
SMC1BQ8NDV3 snoU109.3-201ENST00000459477 145 ntBASIC7.07□□□□□ -1.28
SMC1BQ8NDV3 OARD1-211ENST00000480585 829 ntTSL 3 BASIC7.07□□□□□ -1.28
SMC1BQ8NDV3 AC078788.1-201ENST00000498457 634 ntTSL 3 BASIC7.07□□□□□ -1.28
SMC1BQ8NDV3 HHIP-AS1-203ENST00000512359 646 ntTSL 3 BASIC7.07□□□□□ -1.28
SMC1BQ8NDV3 AC093248.1-201ENST00000513197 417 ntTSL 2 BASIC7.07□□□□□ -1.28
SMC1BQ8NDV3 AC040914.1-201ENST00000518674 318 ntTSL 3 BASIC7.07□□□□□ -1.28
SMC1BQ8NDV3 AC073581.1-201ENST00000519036 575 ntBASIC7.07□□□□□ -1.28
SMC1BQ8NDV3 CARD8-211ENST00000519332 500 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
SMC1BQ8NDV3 AC084706.1-201ENST00000521879 558 ntTSL 2 BASIC7.07□□□□□ -1.28
SMC1BQ8NDV3 AP000942.2-201ENST00000526310 628 ntTSL 3 BASIC7.07□□□□□ -1.28
SMC1BQ8NDV3 AC108721.1-201ENST00000547088 348 ntTSL 3 BASIC7.07□□□□□ -1.28
Retrieved 100 of 98,524 protein–RNA pairs in 99.2 ms