Protein–RNA interactions for Protein: Q8IXQ3

C9orf40, Uncharacterized protein C9orf40, humanhuman

Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf40Q8IXQ3 ADAMDEC1-201ENST00000256412 2348 ntAPPRIS P3 TSL 1 (best) BASIC5□□□□□ -1.61
C9orf40Q8IXQ3 CHMP1B2P-202ENST00000614414 6813 ntTSL 1 (best) BASIC5□□□□□ -1.61
C9orf40Q8IXQ3 AC004784.1-201ENST00000635495 1833 ntTSL 5 BASIC5□□□□□ -1.61
C9orf40Q8IXQ3 DTNA-231ENST00000598774 2418 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
C9orf40Q8IXQ3 TCP11-207ENST00000418521 1575 ntAPPRIS ALT2 TSL 5 BASIC4.99□□□□□ -1.61
C9orf40Q8IXQ3 MBNL2-204ENST00000397601 4487 ntTSL 5 BASIC4.99□□□□□ -1.61
C9orf40Q8IXQ3 TRAT1-201ENST00000295756 1919 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
C9orf40Q8IXQ3 ELMO1-203ENST00000396045 2524 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
C9orf40Q8IXQ3 OR1A1-203ENST00000641732 3832 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
C9orf40Q8IXQ3 SLITRK4-202ENST00000356928 3074 ntAPPRIS P1 TSL 2 BASIC4.99□□□□□ -1.61
C9orf40Q8IXQ3 AL137058.3-201ENST00000624531 3099 ntBASIC4.99□□□□□ -1.61
C9orf40Q8IXQ3 AC003973.3-201ENST00000624863 2822 ntBASIC4.99□□□□□ -1.61
C9orf40Q8IXQ3 ZNF616-204ENST00000600228 4335 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
C9orf40Q8IXQ3 ANK3-201ENST00000280772 16874 ntAPPRIS P3 TSL 1 (best) BASIC4.99□□□□□ -1.61
C9orf40Q8IXQ3 CKAP2-207ENST00000490903 3395 ntAPPRIS ALT2 TSL 2 BASIC4.99□□□□□ -1.61
C9orf40Q8IXQ3 OR51B6-201ENST00000380219 939 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
C9orf40Q8IXQ3 AL050305.1-201ENST00000399993 1230 ntBASIC4.99□□□□□ -1.61
C9orf40Q8IXQ3 AC092675.1-201ENST00000409490 561 ntTSL 4 BASIC4.99□□□□□ -1.61
C9orf40Q8IXQ3 RNA5SP487-201ENST00000410186 122 ntBASIC4.99□□□□□ -1.61
C9orf40Q8IXQ3 PSMA3-202ENST00000412908 908 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
C9orf40Q8IXQ3 GNRH1-202ENST00000421054 470 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
C9orf40Q8IXQ3 AL359265.1-201ENST00000440296 795 ntBASIC4.99□□□□□ -1.61
C9orf40Q8IXQ3 AL161629.1-201ENST00000446201 457 ntTSL 3 BASIC4.99□□□□□ -1.61
C9orf40Q8IXQ3 AC099677.4-201ENST00000446786 380 ntTSL 3 BASIC4.99□□□□□ -1.61
C9orf40Q8IXQ3 GAPDHP25-201ENST00000447061 1001 ntBASIC4.99□□□□□ -1.61
C9orf40Q8IXQ3 BX546450.1-201ENST00000454307 482 ntTSL 2 BASIC4.99□□□□□ -1.61
C9orf40Q8IXQ3 AC092590.1-201ENST00000471672 737 ntTSL 3 BASIC4.99□□□□□ -1.61
C9orf40Q8IXQ3 SEPT7P9-201ENST00000475691 413 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
C9orf40Q8IXQ3 RPS4XP1-201ENST00000482189 787 ntBASIC4.99□□□□□ -1.61
C9orf40Q8IXQ3 AP000926.3-201ENST00000497201 299 ntBASIC4.99□□□□□ -1.61
C9orf40Q8IXQ3 AC087664.1-201ENST00000521456 358 ntTSL 3 BASIC4.99□□□□□ -1.61
C9orf40Q8IXQ3 ARL6IP1P3-201ENST00000524544 560 ntBASIC4.99□□□□□ -1.61
C9orf40Q8IXQ3 GTF2H1-208ENST00000526630 932 ntTSL 2 BASIC4.99□□□□□ -1.61
C9orf40Q8IXQ3 MIR4307HG-201ENST00000548170 822 ntTSL 3 BASIC4.99□□□□□ -1.61
C9orf40Q8IXQ3 LINC02293-202ENST00000548385 358 ntTSL 3 BASIC4.99□□□□□ -1.61
C9orf40Q8IXQ3 AC066613.1-201ENST00000559977 1053 ntTSL 2 BASIC4.99□□□□□ -1.61
C9orf40Q8IXQ3 AC021351.1-202ENST00000561394 701 ntTSL 3 BASIC4.99□□□□□ -1.61
C9orf40Q8IXQ3 AC009117.3-202ENST00000563825 557 ntTSL 4 BASIC4.99□□□□□ -1.61
C9orf40Q8IXQ3 AC234775.3-201ENST00000564612 656 ntBASIC4.99□□□□□ -1.61
C9orf40Q8IXQ3 RPL10P14-201ENST00000565265 298 ntBASIC4.99□□□□□ -1.61
C9orf40Q8IXQ3 AC129507.1-204ENST00000573601 503 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
C9orf40Q8IXQ3 AC087468.1-201ENST00000604365 630 ntBASIC4.99□□□□□ -1.61
C9orf40Q8IXQ3 AP000894.4-201ENST00000610185 483 ntBASIC4.99□□□□□ -1.61
C9orf40Q8IXQ3 SAMD9L-209ENST00000610760 1221 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
C9orf40Q8IXQ3 MIR6133-201ENST00000617057 108 ntBASIC4.99□□□□□ -1.61
C9orf40Q8IXQ3 WBP1LP8-201ENST00000617401 327 ntBASIC4.99□□□□□ -1.61
C9orf40Q8IXQ3 uc_338.7-201ENST00000621834 124 ntBASIC4.99□□□□□ -1.61
C9orf40Q8IXQ3 AC021766.1-201ENST00000624404 741 ntBASIC4.99□□□□□ -1.61
C9orf40Q8IXQ3 OR5H15-202ENST00000641450 1229 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
C9orf40Q8IXQ3 AC005162.3-201ENST00000609389 3695 ntTSL 5 BASIC4.99□□□□□ -1.61
C9orf40Q8IXQ3 PRR14L-201ENST00000327423 10826 ntAPPRIS P2 TSL 5 BASIC4.99□□□□□ -1.61
C9orf40Q8IXQ3 MID2-202ENST00000443968 2251 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
C9orf40Q8IXQ3 GSTM2-206ENST00000442650 1478 ntTSL 5 BASIC4.99□□□□□ -1.61
C9orf40Q8IXQ3 AL078621.3-201ENST00000623707 2042 ntBASIC4.99□□□□□ -1.61
C9orf40Q8IXQ3 SYCP1-201ENST00000369518 3452 ntAPPRIS P1 TSL 5 BASIC4.99□□□□□ -1.61
C9orf40Q8IXQ3 AC004656.1-201ENST00000568479 4951 ntBASIC4.98□□□□□ -1.61
C9orf40Q8IXQ3 TAF9-205ENST00000506736 1331 ntAPPRIS P2 TSL 1 (best) BASIC4.98□□□□□ -1.61
C9orf40Q8IXQ3 CIR1P2-201ENST00000514821 1342 ntBASIC4.98□□□□□ -1.61
C9orf40Q8IXQ3 CDON-206ENST00000531738 5803 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
C9orf40Q8IXQ3 IGSF10-201ENST00000282466 11067 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
C9orf40Q8IXQ3 PHC3-217ENST00000497658 2087 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
C9orf40Q8IXQ3 SEC31A-217ENST00000505984 3596 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
C9orf40Q8IXQ3 ARHGEF3-203ENST00000413728 3992 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
C9orf40Q8IXQ3 EIF1B-201ENST00000232905 1010 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
C9orf40Q8IXQ3 MIRLET7DHG-201ENST00000416309 1294 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
C9orf40Q8IXQ3 GTF3AP1-201ENST00000416942 1004 ntBASIC4.98□□□□□ -1.61
C9orf40Q8IXQ3 AL592402.1-201ENST00000417161 440 ntTSL 4 BASIC4.98□□□□□ -1.61
C9orf40Q8IXQ3 AL162400.1-201ENST00000418091 359 ntTSL 5 BASIC4.98□□□□□ -1.61
C9orf40Q8IXQ3 CASP5-203ENST00000418434 1023 ntTSL 5 BASIC4.98□□□□□ -1.61
C9orf40Q8IXQ3 AC022535.1-201ENST00000420082 691 ntTSL 3 BASIC4.98□□□□□ -1.61
C9orf40Q8IXQ3 TXNIP-201ENST00000425134 1225 ntTSL 2 BASIC4.98□□□□□ -1.61
C9orf40Q8IXQ3 AC245427.2-201ENST00000438839 263 ntTSL 3 BASIC4.98□□□□□ -1.61
C9orf40Q8IXQ3 AC079117.1-201ENST00000445178 1000 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
C9orf40Q8IXQ3 AC013733.1-201ENST00000449835 985 ntTSL 4 BASIC4.98□□□□□ -1.61
C9orf40Q8IXQ3 AL590652.1-201ENST00000453790 850 ntTSL 3 BASIC4.98□□□□□ -1.61
C9orf40Q8IXQ3 TRBV2-201ENST00000455382 421 ntAPPRIS P1 BASIC4.98□□□□□ -1.61
C9orf40Q8IXQ3 AP002371.1-201ENST00000463604 433 ntBASIC4.98□□□□□ -1.61
C9orf40Q8IXQ3 RN7SL197P-201ENST00000466981 299 ntBASIC4.98□□□□□ -1.61
C9orf40Q8IXQ3 RSRC1-207ENST00000475278 1195 ntTSL 5 BASIC4.98□□□□□ -1.61
C9orf40Q8IXQ3 OR2AO1P-201ENST00000476497 403 ntBASIC4.98□□□□□ -1.61
C9orf40Q8IXQ3 MORF4L2P1-201ENST00000503761 858 ntBASIC4.98□□□□□ -1.61
C9orf40Q8IXQ3 AC004069.1-201ENST00000504082 549 ntTSL 4 BASIC4.98□□□□□ -1.61
C9orf40Q8IXQ3 AC024558.1-201ENST00000505008 528 ntBASIC4.98□□□□□ -1.61
C9orf40Q8IXQ3 PGAM1P13-201ENST00000507497 754 ntBASIC4.98□□□□□ -1.61
C9orf40Q8IXQ3 AC139722.1-201ENST00000512502 782 ntTSL 3 BASIC4.98□□□□□ -1.61
C9orf40Q8IXQ3 SPRY4-AS1-205ENST00000514303 152 ntTSL 3 BASIC4.98□□□□□ -1.61
C9orf40Q8IXQ3 RNU6-941P-201ENST00000516346 108 ntBASIC4.98□□□□□ -1.61
C9orf40Q8IXQ3 AC040914.1-201ENST00000518674 318 ntTSL 3 BASIC4.98□□□□□ -1.61
C9orf40Q8IXQ3 AC009509.1-201ENST00000536317 1110 ntTSL 5 BASIC4.98□□□□□ -1.61
C9orf40Q8IXQ3 HNF1A-AS1-203ENST00000537361 659 ntTSL 3 BASIC4.98□□□□□ -1.61
C9orf40Q8IXQ3 AC106730.2-201ENST00000566641 540 ntBASIC4.98□□□□□ -1.61
C9orf40Q8IXQ3 Z98949.1-202ENST00000600211 1282 ntTSL 5 BASIC4.98□□□□□ -1.61
C9orf40Q8IXQ3 AC112211.1-201ENST00000607832 305 ntTSL 3 BASIC4.98□□□□□ -1.61
C9orf40Q8IXQ3 AC244107.2-201ENST00000611773 76 ntBASIC4.98□□□□□ -1.61
C9orf40Q8IXQ3 MAP3K19-204ENST00000392915 5030 ntAPPRIS P3 TSL 5 BASIC4.98□□□□□ -1.61
C9orf40Q8IXQ3 RAPGEF4-215ENST00000540783 3974 ntTSL 2 BASIC4.98□□□□□ -1.61
C9orf40Q8IXQ3 OR10G7-202ENST00000641585 3449 ntAPPRIS P1 BASIC4.98□□□□□ -1.61
C9orf40Q8IXQ3 SRGAP1-201ENST00000355086 23331 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
C9orf40Q8IXQ3 MDN1-201ENST00000369393 18413 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
C9orf40Q8IXQ3 NRXN1-242ENST00000635519 3553 ntTSL 5 BASIC4.98□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 96.5 ms