Protein–RNA interactions for Protein: Q8IVW4

CDKL3, Cyclin-dependent kinase-like 3, humanhuman

Predicted RBP Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL3Q8IVW4 AC060766.1-201ENST00000590824 627 ntBASIC5.51□□□□□ -1.53
CDKL3Q8IVW4 FAM72B-201ENST00000355228 1773 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
CDKL3Q8IVW4 GPR1-201ENST00000407325 2295 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
CDKL3Q8IVW4 CSMD3-204ENST00000455883 12485 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
CDKL3Q8IVW4 RXFP1-206ENST00000460056 2735 ntTSL 2 BASIC5.51□□□□□ -1.53
CDKL3Q8IVW4 RNF20-202ENST00000389120 3940 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
CDKL3Q8IVW4 RPGRIP1L-201ENST00000262135 8195 ntAPPRIS P3 TSL 5 BASIC5.51□□□□□ -1.53
CDKL3Q8IVW4 BBOX1-202ENST00000525090 1596 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
CDKL3Q8IVW4 OR56A4-204ENST00000641835 3613 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
CDKL3Q8IVW4 LMO3-209ENST00000447609 3365 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
CDKL3Q8IVW4 LGALS8-222ENST00000527974 1349 ntAPPRIS P4 TSL 5 BASIC5.5□□□□□ -1.53
CDKL3Q8IVW4 LINC02227-201ENST00000619068 3748 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
CDKL3Q8IVW4 EYA4-211ENST00000525849 3456 ntTSL 5 BASIC5.5□□□□□ -1.53
CDKL3Q8IVW4 AC091045.1-201ENST00000561460 2277 ntTSL 5 BASIC5.5□□□□□ -1.53
CDKL3Q8IVW4 GUCY1A3-201ENST00000296518 4400 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
CDKL3Q8IVW4 MIA3-203ENST00000344922 8142 ntAPPRIS P2 TSL 5 BASIC5.5□□□□□ -1.53
CDKL3Q8IVW4 PLCXD3-201ENST00000328457 7538 ntAPPRIS P1 TSL 5 BASIC5.5□□□□□ -1.53
CDKL3Q8IVW4 PTK2-213ENST00000519465 3279 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
CDKL3Q8IVW4 ZNF790-201ENST00000356725 3037 ntAPPRIS P1 TSL 2 BASIC5.5□□□□□ -1.53
CDKL3Q8IVW4 IFNA10-201ENST00000357374 963 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
CDKL3Q8IVW4 RNA5SP319-201ENST00000362768 119 ntBASIC5.5□□□□□ -1.53
CDKL3Q8IVW4 FIG4-202ENST00000368941 791 ntTSL 3 BASIC5.5□□□□□ -1.53
CDKL3Q8IVW4 AL355300.1-201ENST00000412439 187 ntTSL 3 BASIC5.5□□□□□ -1.53
CDKL3Q8IVW4 AL158817.1-201ENST00000422310 933 ntTSL 3 BASIC5.5□□□□□ -1.53
CDKL3Q8IVW4 AL390115.1-201ENST00000425271 423 ntTSL 5 BASIC5.5□□□□□ -1.53
CDKL3Q8IVW4 MAJIN-202ENST00000432175 838 ntAPPRIS P3 TSL 1 (best) BASIC5.5□□□□□ -1.53
CDKL3Q8IVW4 LINC02532-206ENST00000433965 570 ntTSL 2 BASIC5.5□□□□□ -1.53
CDKL3Q8IVW4 AC073109.1-201ENST00000445066 978 ntBASIC5.5□□□□□ -1.53
CDKL3Q8IVW4 GAPDHP25-201ENST00000447061 1001 ntBASIC5.5□□□□□ -1.53
CDKL3Q8IVW4 GAPDHP14-201ENST00000450472 937 ntBASIC5.5□□□□□ -1.53
CDKL3Q8IVW4 BX546450.1-201ENST00000454307 482 ntTSL 2 BASIC5.5□□□□□ -1.53
CDKL3Q8IVW4 RN7SL51P-201ENST00000468230 285 ntBASIC5.5□□□□□ -1.53
CDKL3Q8IVW4 CBX1P5-201ENST00000475330 559 ntBASIC5.5□□□□□ -1.53
CDKL3Q8IVW4 SLC9A9-AS2-201ENST00000490153 327 ntTSL 5 BASIC5.5□□□□□ -1.53
CDKL3Q8IVW4 AL049874.2-201ENST00000492636 288 ntBASIC5.5□□□□□ -1.53
CDKL3Q8IVW4 AC016559.2-201ENST00000510759 359 ntBASIC5.5□□□□□ -1.53
CDKL3Q8IVW4 LINC00992-202ENST00000514186 564 ntTSL 5 BASIC5.5□□□□□ -1.53
CDKL3Q8IVW4 CCDC60-203ENST00000536742 886 ntAPPRIS ALT2 TSL 2 BASIC5.5□□□□□ -1.53
CDKL3Q8IVW4 LINC00933-205ENST00000560917 449 ntTSL 3 BASIC5.5□□□□□ -1.53
CDKL3Q8IVW4 LINC01904-201ENST00000564872 861 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
CDKL3Q8IVW4 AC092944.2-201ENST00000605443 889 ntBASIC5.5□□□□□ -1.53
CDKL3Q8IVW4 MIR6778-201ENST00000617912 73 ntBASIC5.5□□□□□ -1.53
CDKL3Q8IVW4 MIR6839-201ENST00000620425 113 ntBASIC5.5□□□□□ -1.53
CDKL3Q8IVW4 C1orf195-202ENST00000625027 441 ntTSL 5 BASIC5.5□□□□□ -1.53
CDKL3Q8IVW4 MIR1910-201ENST00000636955 80 ntBASIC5.5□□□□□ -1.53
CDKL3Q8IVW4 ZNF534-202ENST00000332323 2086 ntAPPRIS P4 TSL 1 (best) BASIC5.5□□□□□ -1.53
CDKL3Q8IVW4 AL353796.1-201ENST00000561542 3241 ntBASIC5.5□□□□□ -1.53
CDKL3Q8IVW4 DMTF1-204ENST00000413276 3548 ntTSL 5 BASIC5.5□□□□□ -1.53
CDKL3Q8IVW4 VPS41-203ENST00000395969 3181 ntTSL 5 BASIC5.5□□□□□ -1.53
CDKL3Q8IVW4 GJA9-201ENST00000357771 1799 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
CDKL3Q8IVW4 LMOD2-202ENST00000458573 2346 ntAPPRIS P1 TSL 2 BASIC5.49□□□□□ -1.53
CDKL3Q8IVW4 OR8D4-201ENST00000321355 1331 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
CDKL3Q8IVW4 WAC-209ENST00000428935 1320 ntTSL 2 BASIC5.49□□□□□ -1.53
CDKL3Q8IVW4 DOCK10-202ENST00000409592 7288 ntAPPRIS ALT2 TSL 1 (best) BASIC5.49□□□□□ -1.53
CDKL3Q8IVW4 CASP1-208ENST00000527979 1521 ntTSL 5 BASIC5.49□□□□□ -1.53
CDKL3Q8IVW4 AASDH-201ENST00000205214 3590 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
CDKL3Q8IVW4 C4orf17-201ENST00000326581 1636 ntAPPRIS P2 TSL 1 (best) BASIC5.49□□□□□ -1.53
CDKL3Q8IVW4 ATRX-201ENST00000373344 11220 ntAPPRIS P4 TSL 1 (best) BASIC5.49□□□□□ -1.53
CDKL3Q8IVW4 AC079601.1-201ENST00000547824 2791 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
CDKL3Q8IVW4 AL158064.2-203ENST00000639897 2003 ntTSL 5 BASIC5.49□□□□□ -1.53
CDKL3Q8IVW4 CLEC4A-203ENST00000352620 615 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
CDKL3Q8IVW4 LINC00474-201ENST00000374014 769 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
CDKL3Q8IVW4 SMARCA2-207ENST00000382186 955 ntTSL 3 BASIC5.49□□□□□ -1.53
CDKL3Q8IVW4 RNA5SP487-201ENST00000410186 122 ntBASIC5.49□□□□□ -1.53
CDKL3Q8IVW4 AC002524.1-201ENST00000411687 547 ntBASIC5.49□□□□□ -1.53
CDKL3Q8IVW4 PPP2R2DP1-201ENST00000420526 637 ntBASIC5.49□□□□□ -1.53
CDKL3Q8IVW4 AC069277.1-205ENST00000432743 630 ntTSL 5 BASIC5.49□□□□□ -1.53
CDKL3Q8IVW4 RPL12P11-201ENST00000439970 501 ntBASIC5.49□□□□□ -1.53
CDKL3Q8IVW4 FLJ27354-202ENST00000443562 770 ntTSL 3 BASIC5.49□□□□□ -1.53
CDKL3Q8IVW4 AF130359.1-201ENST00000444868 438 ntTSL 3 BASIC5.49□□□□□ -1.53
CDKL3Q8IVW4 HMGN1P36-201ENST00000446623 298 ntBASIC5.49□□□□□ -1.53
CDKL3Q8IVW4 LINC01344-202ENST00000449842 571 ntTSL 3 BASIC5.49□□□□□ -1.53
CDKL3Q8IVW4 AL022329.1-203ENST00000453811 451 ntTSL 3 BASIC5.49□□□□□ -1.53
CDKL3Q8IVW4 AC068631.1-205ENST00000455926 409 ntTSL 3 BASIC5.49□□□□□ -1.53
CDKL3Q8IVW4 AC079168.1-201ENST00000458741 345 ntBASIC5.49□□□□□ -1.53
CDKL3Q8IVW4 DEFB109A-201ENST00000482450 265 ntBASIC5.49□□□□□ -1.53
CDKL3Q8IVW4 RN7SL423P-201ENST00000486202 304 ntBASIC5.49□□□□□ -1.53
CDKL3Q8IVW4 AC090638.1-201ENST00000498296 909 ntBASIC5.49□□□□□ -1.53
CDKL3Q8IVW4 MYLK-AS2-201ENST00000510827 500 ntTSL 3 BASIC5.49□□□□□ -1.53
CDKL3Q8IVW4 AC074087.1-201ENST00000512059 724 ntBASIC5.49□□□□□ -1.53
CDKL3Q8IVW4 EIF3KP3-201ENST00000514461 639 ntBASIC5.49□□□□□ -1.53
CDKL3Q8IVW4 TWF1-207ENST00000548315 1170 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
CDKL3Q8IVW4 PCED1B-AS1-210ENST00000552975 378 ntTSL 2 BASIC5.49□□□□□ -1.53
CDKL3Q8IVW4 NDUFA5P11-201ENST00000567995 343 ntBASIC5.49□□□□□ -1.53
CDKL3Q8IVW4 MIR1273E-201ENST00000581165 102 ntBASIC5.49□□□□□ -1.53
CDKL3Q8IVW4 PRPF19P1-201ENST00000584766 898 ntBASIC5.49□□□□□ -1.53
CDKL3Q8IVW4 AC002069.2-201ENST00000603580 883 ntBASIC5.49□□□□□ -1.53
CDKL3Q8IVW4 ASNSD1-208ENST00000607690 535 ntTSL 2 BASIC5.49□□□□□ -1.53
CDKL3Q8IVW4 ASNSD1-209ENST00000607829 581 ntTSL 2 BASIC5.49□□□□□ -1.53
CDKL3Q8IVW4 AC063952.1-204ENST00000635496 927 ntTSL 5 BASIC5.49□□□□□ -1.53
CDKL3Q8IVW4 AGO3-203ENST00000373191 19687 ntAPPRIS P1 TSL 2 BASIC5.49□□□□□ -1.53
CDKL3Q8IVW4 AC020743.2-201ENST00000639870 1370 ntTSL 5 BASIC5.49□□□□□ -1.53
CDKL3Q8IVW4 C4orf36-203ENST00000473559 2306 ntAPPRIS P1 TSL 2 BASIC5.49□□□□□ -1.53
CDKL3Q8IVW4 ENPP2-207ENST00000522167 1695 ntTSL 2 BASIC5.49□□□□□ -1.53
CDKL3Q8IVW4 CNGA1-207ENST00000514170 2837 ntAPPRIS P3 TSL 5 BASIC5.49□□□□□ -1.53
CDKL3Q8IVW4 C5orf42-201ENST00000425232 11199 ntAPPRIS P2 TSL 5 BASIC5.49□□□□□ -1.53
CDKL3Q8IVW4 ZNF704-201ENST00000327835 14386 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
CDKL3Q8IVW4 CDC42SE2-201ENST00000360515 3591 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
CDKL3Q8IVW4 ZNF343-207ENST00000612935 3675 ntAPPRIS ALT2 TSL 5 BASIC5.49□□□□□ -1.53
CDKL3Q8IVW4 CYP3A43-201ENST00000222382 1515 ntAPPRIS P4 TSL 1 (best) BASIC5.48□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 90.3 ms