Protein–RNA interactions for Protein: Q7RTU7

SCX, Basic helix-loop-helix transcription factor scleraxis, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCXQ7RTU7 GAS2L3-203ENST00000539410 2229 ntAPPRIS P1 TSL 2 BASIC3.7□□□□□ -1.82
SCXQ7RTU7 GABRG2-214ENST00000639111 11735 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
SCXQ7RTU7 MTTP-203ENST00000457717 4092 ntAPPRIS P1 TSL 5 BASIC3.7□□□□□ -1.82
SCXQ7RTU7 TRPC5OS-201ENST00000371970 2806 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
SCXQ7RTU7 ARHGAP21-202ENST00000376410 3526 ntTSL 5 BASIC3.7□□□□□ -1.82
SCXQ7RTU7 MGP-201ENST00000228938 694 ntTSL 3 BASIC3.7□□□□□ -1.82
SCXQ7RTU7 SPINK7-201ENST00000274565 557 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
SCXQ7RTU7 C3orf49-201ENST00000295896 1292 ntAPPRIS P5 TSL 2 BASIC3.7□□□□□ -1.82
SCXQ7RTU7 AMELX-201ENST00000348912 737 ntTSL 5 BASIC3.7□□□□□ -1.82
SCXQ7RTU7 TYRP1-201ENST00000381136 872 ntTSL 2 BASIC3.7□□□□□ -1.82
SCXQ7RTU7 SNORA70.6-201ENST00000383934 134 ntBASIC3.7□□□□□ -1.82
SCXQ7RTU7 MYL6P5-201ENST00000412707 459 ntBASIC3.7□□□□□ -1.82
SCXQ7RTU7 SETP15-201ENST00000412724 337 ntBASIC3.7□□□□□ -1.82
SCXQ7RTU7 AL158827.1-201ENST00000416300 391 ntBASIC3.7□□□□□ -1.82
SCXQ7RTU7 AL662874.1-201ENST00000426065 230 ntBASIC3.7□□□□□ -1.82
SCXQ7RTU7 RPS27AP6-201ENST00000427962 448 ntBASIC3.7□□□□□ -1.82
SCXQ7RTU7 LYPLA1P1-201ENST00000434514 622 ntBASIC3.7□□□□□ -1.82
SCXQ7RTU7 AL663074.2-201ENST00000440621 479 ntBASIC3.7□□□□□ -1.82
SCXQ7RTU7 AC023141.8-201ENST00000442554 208 ntBASIC3.7□□□□□ -1.82
SCXQ7RTU7 EIF4A1P6-201ENST00000448133 1210 ntBASIC3.7□□□□□ -1.82
SCXQ7RTU7 SRGAP3-AS4-201ENST00000449023 377 ntTSL 2 BASIC3.7□□□□□ -1.82
SCXQ7RTU7 AL591623.2-201ENST00000449978 222 ntBASIC3.7□□□□□ -1.82
SCXQ7RTU7 TRBV5-2-201ENST00000489095 273 ntBASIC3.7□□□□□ -1.82
SCXQ7RTU7 MORF4L2P1-201ENST00000503761 858 ntBASIC3.7□□□□□ -1.82
SCXQ7RTU7 AC096577.1-202ENST00000515649 448 ntTSL 3 BASIC3.7□□□□□ -1.82
SCXQ7RTU7 SNORA43.3-201ENST00000517240 103 ntBASIC3.7□□□□□ -1.82
SCXQ7RTU7 MINCR-206ENST00000524335 499 ntTSL 2 BASIC3.7□□□□□ -1.82
SCXQ7RTU7 IGLV3-30-201ENST00000524362 298 ntBASIC3.7□□□□□ -1.82
SCXQ7RTU7 HMGB1P42-201ENST00000532126 553 ntBASIC3.7□□□□□ -1.82
SCXQ7RTU7 AP002383.3-201ENST00000545958 593 ntTSL 4 BASIC3.7□□□□□ -1.82
SCXQ7RTU7 AL049872.1-201ENST00000556323 322 ntBASIC3.7□□□□□ -1.82
SCXQ7RTU7 C15orf41-204ENST00000562877 764 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
SCXQ7RTU7 AC126323.3-201ENST00000565136 564 ntTSL 4 BASIC3.7□□□□□ -1.82
SCXQ7RTU7 AC122134.1-201ENST00000565664 1104 ntBASIC3.7□□□□□ -1.82
SCXQ7RTU7 MIR4260-201ENST00000583107 67 ntBASIC3.7□□□□□ -1.82
SCXQ7RTU7 TEX26-AS1-204ENST00000585582 853 ntTSL 5 BASIC3.7□□□□□ -1.82
SCXQ7RTU7 Z98949.1-203ENST00000597284 851 ntTSL 5 BASIC3.7□□□□□ -1.82
SCXQ7RTU7 HCG18-243ENST00000602498 327 ntTSL 3 BASIC3.7□□□□□ -1.82
SCXQ7RTU7 AC145423.1-201ENST00000605712 336 ntBASIC3.7□□□□□ -1.82
SCXQ7RTU7 AC079395.2-201ENST00000610982 737 ntBASIC3.7□□□□□ -1.82
SCXQ7RTU7 Metazoa_SRP.179-201ENST00000619020 241 ntBASIC3.7□□□□□ -1.82
SCXQ7RTU7 OFD1P9Y-201ENST00000417699 1491 ntBASIC3.7□□□□□ -1.82
SCXQ7RTU7 HCFC2P1-201ENST00000392864 1592 ntBASIC3.7□□□□□ -1.82
SCXQ7RTU7 FAM72B-201ENST00000355228 1773 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
SCXQ7RTU7 FOXN2-201ENST00000340553 5408 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
SCXQ7RTU7 IL1R1-202ENST00000409329 1862 ntTSL 5 BASIC3.7□□□□□ -1.82
SCXQ7RTU7 AC093775.1-201ENST00000624154 1868 ntBASIC3.7□□□□□ -1.82
SCXQ7RTU7 TIPARP-205ENST00000486483 2150 ntAPPRIS P1 TSL 5 BASIC3.7□□□□□ -1.82
SCXQ7RTU7 AL022322.2-201ENST00000624072 20397 ntBASIC3.7□□□□□ -1.82
SCXQ7RTU7 AC139769.2-201ENST00000599944 2291 ntTSL 2 BASIC3.7□□□□□ -1.82
SCXQ7RTU7 YPEL5-202ENST00000379519 2499 ntAPPRIS P1 TSL 2 BASIC3.7□□□□□ -1.82
SCXQ7RTU7 ATF7IP2-201ENST00000324570 3396 ntTSL 5 BASIC3.7□□□□□ -1.82
SCXQ7RTU7 AP002518.1-201ENST00000534904 3837 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
SCXQ7RTU7 MCF2L2-202ENST00000414362 3031 ntTSL 2 BASIC3.7□□□□□ -1.82
SCXQ7RTU7 ZNF195-201ENST00000005082 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC3.7□□□□□ -1.82
SCXQ7RTU7 ZNF107-205ENST00000613690 5589 ntAPPRIS ALT2 TSL 5 BASIC3.7□□□□□ -1.82
SCXQ7RTU7 DCDC1-207ENST00000452803 1706 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
SCXQ7RTU7 PTPRD-206ENST00000397617 8248 ntTSL 5 BASIC3.7□□□□□ -1.82
SCXQ7RTU7 FOXP2-202ENST00000360232 1412 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
SCXQ7RTU7 ZNF678-201ENST00000343776 8556 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
SCXQ7RTU7 DLX6-AS1-201ENST00000430027 15364 ntTSL 2 BASIC3.69□□□□□ -1.82
SCXQ7RTU7 MIR4500HG-201ENST00000436290 1675 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
SCXQ7RTU7 TJP1-209ENST00000545208 5007 ntAPPRIS ALT2 TSL 5 BASIC3.69□□□□□ -1.82
SCXQ7RTU7 C1orf27-201ENST00000287859 3792 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
SCXQ7RTU7 DENND4A-201ENST00000431932 5875 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
SCXQ7RTU7 ADAM18-202ENST00000379866 2314 ntAPPRIS ALT2 TSL 1 (best) BASIC3.69□□□□□ -1.82
SCXQ7RTU7 INTU-201ENST00000335251 13233 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
SCXQ7RTU7 ZMAT1-201ENST00000372782 3185 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
SCXQ7RTU7 KLHL4-202ENST00000373119 5818 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
SCXQ7RTU7 ZC2HC1B-201ENST00000237275 1002 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
SCXQ7RTU7 OR1L4-201ENST00000259466 936 ntAPPRIS P1 BASIC3.69□□□□□ -1.82
SCXQ7RTU7 OR2AE1-201ENST00000316368 1071 ntAPPRIS P1 BASIC3.69□□□□□ -1.82
SCXQ7RTU7 SNORA64.1-201ENST00000362600 132 ntBASIC3.69□□□□□ -1.82
SCXQ7RTU7 RN7SKP160-201ENST00000363804 340 ntBASIC3.69□□□□□ -1.82
SCXQ7RTU7 RNA5SP132-201ENST00000364725 118 ntBASIC3.69□□□□□ -1.82
SCXQ7RTU7 AL626787.1-201ENST00000366136 594 ntTSL 4 BASIC3.69□□□□□ -1.82
SCXQ7RTU7 OR2J1-201ENST00000377171 1273 ntAPPRIS P1 BASIC3.69□□□□□ -1.82
SCXQ7RTU7 TRAV10-201ENST00000390432 379 ntAPPRIS P1 BASIC3.69□□□□□ -1.82
SCXQ7RTU7 ZSCAN12P1-201ENST00000406489 419 ntBASIC3.69□□□□□ -1.82
SCXQ7RTU7 LYST-AS1-201ENST00000412098 521 ntTSL 3 BASIC3.69□□□□□ -1.82
SCXQ7RTU7 PSMA3-202ENST00000412908 908 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
SCXQ7RTU7 AC079809.1-201ENST00000415468 276 ntBASIC3.69□□□□□ -1.82
SCXQ7RTU7 EEF1A1P29-201ENST00000416082 1096 ntBASIC3.69□□□□□ -1.82
SCXQ7RTU7 BMS1P17-202ENST00000416720 316 ntBASIC3.69□□□□□ -1.82
SCXQ7RTU7 LINC02518-201ENST00000421737 524 ntTSL 3 BASIC3.69□□□□□ -1.82
SCXQ7RTU7 BX510359.3-201ENST00000422168 306 ntBASIC3.69□□□□□ -1.82
SCXQ7RTU7 TNPO1P1-201ENST00000423641 1138 ntBASIC3.69□□□□□ -1.82
SCXQ7RTU7 FRMPD4-AS1-201ENST00000425057 285 ntTSL 3 BASIC3.69□□□□□ -1.82
SCXQ7RTU7 AC244033.1-201ENST00000426826 870 ntBASIC3.69□□□□□ -1.82
SCXQ7RTU7 AL022331.1-201ENST00000429025 477 ntBASIC3.69□□□□□ -1.82
SCXQ7RTU7 AC004990.1-201ENST00000431722 564 ntTSL 4 BASIC3.69□□□□□ -1.82
SCXQ7RTU7 RAB9AP5-201ENST00000437794 597 ntBASIC3.69□□□□□ -1.82
SCXQ7RTU7 Z84478.1-201ENST00000438230 1219 ntBASIC3.69□□□□□ -1.82
SCXQ7RTU7 RAB9AP2-201ENST00000443911 597 ntBASIC3.69□□□□□ -1.82
SCXQ7RTU7 MYO5BP2-201ENST00000449815 1277 ntBASIC3.69□□□□□ -1.82
SCXQ7RTU7 LINC01780-202ENST00000457683 391 ntTSL 3 BASIC3.69□□□□□ -1.82
SCXQ7RTU7 AL157777.1-201ENST00000468100 304 ntBASIC3.69□□□□□ -1.82
SCXQ7RTU7 RGS1-203ENST00000469578 1034 ntTSL 2 BASIC3.69□□□□□ -1.82
SCXQ7RTU7 PFN1P6-201ENST00000476786 399 ntBASIC3.69□□□□□ -1.82
SCXQ7RTU7 OARD1-211ENST00000480585 829 ntTSL 3 BASIC3.69□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 163.7 ms