Protein–RNA interactions for Protein: Q02539

HIST1H1A, Histone H1.1, humanhuman

Predicted RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1AQ02539 AL591363.1-201ENST00000450091 483 ntBASIC4.19□□□□□ -1.74
HIST1H1AQ02539 WDR11-AS1-201ENST00000451706 1108 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
HIST1H1AQ02539 YRDCP3-201ENST00000456507 480 ntBASIC4.19□□□□□ -1.74
HIST1H1AQ02539 CTSLP6-201ENST00000458273 1002 ntBASIC4.19□□□□□ -1.74
HIST1H1AQ02539 RSRC1-207ENST00000475278 1195 ntTSL 5 BASIC4.19□□□□□ -1.74
HIST1H1AQ02539 AC073610.1-201ENST00000489971 396 ntBASIC4.19□□□□□ -1.74
HIST1H1AQ02539 CSNK1A1P3-201ENST00000504105 330 ntBASIC4.19□□□□□ -1.74
HIST1H1AQ02539 AC010451.1-201ENST00000509057 556 ntTSL 3 BASIC4.19□□□□□ -1.74
HIST1H1AQ02539 AC021193.1-201ENST00000511607 420 ntBASIC4.19□□□□□ -1.74
HIST1H1AQ02539 Vault.2-201ENST00000516519 98 ntBASIC4.19□□□□□ -1.74
HIST1H1AQ02539 SNORA70.20-201ENST00000516848 126 ntBASIC4.19□□□□□ -1.74
HIST1H1AQ02539 AC064802.1-201ENST00000521523 866 ntTSL 2 BASIC4.19□□□□□ -1.74
HIST1H1AQ02539 AC013714.1-201ENST00000524707 747 ntTSL 3 BASIC4.19□□□□□ -1.74
HIST1H1AQ02539 AC068305.2-201ENST00000550567 1205 ntBASIC4.19□□□□□ -1.74
HIST1H1AQ02539 AL135838.1-201ENST00000556080 235 ntTSL 3 BASIC4.19□□□□□ -1.74
HIST1H1AQ02539 AC068722.1-202ENST00000559600 655 ntTSL 3 BASIC4.19□□□□□ -1.74
HIST1H1AQ02539 AC048382.2-201ENST00000560239 492 ntTSL 2 BASIC4.19□□□□□ -1.74
HIST1H1AQ02539 PWRN1-204ENST00000565241 480 ntTSL 2 BASIC4.19□□□□□ -1.74
HIST1H1AQ02539 CASC22-201ENST00000569713 386 ntTSL 5 BASIC4.19□□□□□ -1.74
HIST1H1AQ02539 AC114488.3-201ENST00000581333 480 ntTSL 4 BASIC4.19□□□□□ -1.74
HIST1H1AQ02539 AL356608.1-201ENST00000610034 820 ntBASIC4.19□□□□□ -1.74
HIST1H1AQ02539 LINC02033-201ENST00000623207 971 ntTSL 2 BASIC4.19□□□□□ -1.74
HIST1H1AQ02539 AC073593.1-201ENST00000624500 411 ntBASIC4.19□□□□□ -1.74
HIST1H1AQ02539 AC022919.1-201ENST00000624979 626 ntBASIC4.19□□□□□ -1.74
HIST1H1AQ02539 LINC01955-201ENST00000626392 792 ntTSL 5 BASIC4.19□□□□□ -1.74
HIST1H1AQ02539 ZNF253-205ENST00000640599 1208 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
HIST1H1AQ02539 AC008691.1-207ENST00000636819 4154 ntTSL 5 BASIC4.19□□□□□ -1.74
HIST1H1AQ02539 SEC31A-226ENST00000508479 3397 ntTSL 2 BASIC4.19□□□□□ -1.74
HIST1H1AQ02539 EMSY-204ENST00000524490 4015 ntTSL 2 BASIC4.19□□□□□ -1.74
HIST1H1AQ02539 IFIT1P1-201ENST00000400497 1449 ntBASIC4.19□□□□□ -1.74
HIST1H1AQ02539 AC092821.1-201ENST00000640129 4180 ntAPPRIS P1 TSL 5 BASIC4.19□□□□□ -1.74
HIST1H1AQ02539 ZNF845-201ENST00000458035 4311 ntAPPRIS P1 TSL 4 BASIC4.19□□□□□ -1.74
HIST1H1AQ02539 EYA1-203ENST00000388740 3788 ntTSL 5 BASIC4.18□□□□□ -1.74
HIST1H1AQ02539 MED13-201ENST00000397786 10465 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
HIST1H1AQ02539 ALCAM-205ENST00000472644 4189 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
HIST1H1AQ02539 SLC44A5-201ENST00000370855 4406 ntAPPRIS P3 TSL 1 (best) BASIC4.18□□□□□ -1.74
HIST1H1AQ02539 RRM1-201ENST00000300738 3076 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
HIST1H1AQ02539 SEC31A-217ENST00000505984 3596 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
HIST1H1AQ02539 ZNF780B-202ENST00000434248 8665 ntAPPRIS P1 TSL 5 BASIC4.18□□□□□ -1.74
HIST1H1AQ02539 ZNF780B-207ENST00000617676 8664 ntAPPRIS P1 TSL 5 BASIC4.18□□□□□ -1.74
HIST1H1AQ02539 DLX6-AS1-201ENST00000430027 15364 ntTSL 2 BASIC4.18□□□□□ -1.74
HIST1H1AQ02539 ZFX-203ENST00000379177 7558 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
HIST1H1AQ02539 CASC19-201ENST00000500112 5735 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
HIST1H1AQ02539 HDAC9-204ENST00000406451 9705 ntAPPRIS ALT1 TSL 1 (best) BASIC4.18□□□□□ -1.74
HIST1H1AQ02539 UTS2B-201ENST00000340524 2395 ntAPPRIS P1 TSL 2 BASIC4.18□□□□□ -1.74
HIST1H1AQ02539 SPAM1-203ENST00000402183 1860 ntAPPRIS P4 TSL 5 BASIC4.18□□□□□ -1.74
HIST1H1AQ02539 DOCK7-211ENST00000634264 6303 ntAPPRIS ALT2 TSL 5 BASIC4.18□□□□□ -1.74
HIST1H1AQ02539 ZNF571-202ENST00000358744 2049 ntAPPRIS P1 TSL 2 BASIC4.18□□□□□ -1.74
HIST1H1AQ02539 FHIT-201ENST00000341848 174 ntTSL 3 BASIC4.18□□□□□ -1.74
HIST1H1AQ02539 AMELX-201ENST00000348912 737 ntTSL 5 BASIC4.18□□□□□ -1.74
HIST1H1AQ02539 AC090616.2-201ENST00000358484 431 ntTSL 3 BASIC4.18□□□□□ -1.74
HIST1H1AQ02539 RNA5SP30-201ENST00000365552 115 ntBASIC4.18□□□□□ -1.74
HIST1H1AQ02539 PAGE2-202ENST00000374968 551 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
HIST1H1AQ02539 SNORD56.6-201ENST00000384569 71 ntBASIC4.18□□□□□ -1.74
HIST1H1AQ02539 SNORA48.4-201ENST00000391089 134 ntBASIC4.18□□□□□ -1.74
HIST1H1AQ02539 LSM5-203ENST00000409782 649 ntTSL 5 BASIC4.18□□□□□ -1.74
HIST1H1AQ02539 HSD17B7P1-201ENST00000412419 1017 ntBASIC4.18□□□□□ -1.74
HIST1H1AQ02539 AL445190.1-201ENST00000416448 288 ntTSL 5 BASIC4.18□□□□□ -1.74
HIST1H1AQ02539 AC004990.1-201ENST00000431722 564 ntTSL 4 BASIC4.18□□□□□ -1.74
HIST1H1AQ02539 LINC01506-201ENST00000432148 495 ntTSL 2 BASIC4.18□□□□□ -1.74
HIST1H1AQ02539 AL354863.1-204ENST00000436430 556 ntTSL 3 BASIC4.18□□□□□ -1.74
HIST1H1AQ02539 LINC01350-201ENST00000436955 642 ntTSL 3 BASIC4.18□□□□□ -1.74
HIST1H1AQ02539 AL807757.1-201ENST00000437846 424 ntTSL 3 BASIC4.18□□□□□ -1.74
HIST1H1AQ02539 AL583854.1-201ENST00000438818 613 ntTSL 5 BASIC4.18□□□□□ -1.74
HIST1H1AQ02539 AL450263.2-201ENST00000439400 589 ntBASIC4.18□□□□□ -1.74
HIST1H1AQ02539 LINC01781-202ENST00000443104 591 ntTSL 2 BASIC4.18□□□□□ -1.74
HIST1H1AQ02539 AL139120.1-201ENST00000443652 358 ntTSL 3 BASIC4.18□□□□□ -1.74
HIST1H1AQ02539 AL096855.1-202ENST00000444276 439 ntTSL 2 BASIC4.18□□□□□ -1.74
HIST1H1AQ02539 RPSAP37-201ENST00000470913 821 ntBASIC4.18□□□□□ -1.74
HIST1H1AQ02539 AC087672.1-201ENST00000479876 766 ntBASIC4.18□□□□□ -1.74
HIST1H1AQ02539 OARD1-211ENST00000480585 829 ntTSL 3 BASIC4.18□□□□□ -1.74
HIST1H1AQ02539 AC098976.1-201ENST00000513014 541 ntBASIC4.18□□□□□ -1.74
HIST1H1AQ02539 RN7SKP253-201ENST00000516424 309 ntBASIC4.18□□□□□ -1.74
HIST1H1AQ02539 RNU6-964P-201ENST00000516524 69 ntBASIC4.18□□□□□ -1.74
HIST1H1AQ02539 MINCR-206ENST00000524335 499 ntTSL 2 BASIC4.18□□□□□ -1.74
HIST1H1AQ02539 AC015802.2-201ENST00000589690 189 ntBASIC4.18□□□□□ -1.74
HIST1H1AQ02539 ZNF66-203ENST00000594534 757 ntTSL 5 BASIC4.18□□□□□ -1.74
HIST1H1AQ02539 AL121890.2-201ENST00000617644 465 ntBASIC4.18□□□□□ -1.74
HIST1H1AQ02539 POU2F1-212ENST00000541643 13937 ntAPPRIS ALT2 TSL 1 (best) BASIC4.18□□□□□ -1.74
HIST1H1AQ02539 AL355306.2-206ENST00000635233 1903 ntTSL 5 BASIC4.18□□□□□ -1.74
HIST1H1AQ02539 ZNF280B-201ENST00000613655 3714 ntAPPRIS P1 TSL 5 BASIC4.18□□□□□ -1.74
HIST1H1AQ02539 ZNF571-201ENST00000328550 4113 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
HIST1H1AQ02539 ANKRD30A-202ENST00000374660 4762 ntAPPRIS ALT2 TSL 5 BASIC4.18□□□□□ -1.74
HIST1H1AQ02539 LINC01355-201ENST00000566551 5444 ntBASIC4.18□□□□□ -1.74
HIST1H1AQ02539 CLEC12A-203ENST00000355690 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC4.18□□□□□ -1.74
HIST1H1AQ02539 SLAIN1-201ENST00000267219 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC4.18□□□□□ -1.74
HIST1H1AQ02539 HEATR5A-203ENST00000543095 7840 ntAPPRIS P1 TSL 5 BASIC4.18□□□□□ -1.74
HIST1H1AQ02539 CYLD-207ENST00000564326 3259 ntAPPRIS P1 TSL 5 BASIC4.18□□□□□ -1.74
HIST1H1AQ02539 MRE11-203ENST00000393241 2604 ntAPPRIS ALT1 TSL 5 BASIC4.18□□□□□ -1.74
HIST1H1AQ02539 SRRM1-203ENST00000447431 3691 ntAPPRIS ALT2 TSL 5 BASIC4.18□□□□□ -1.74
HIST1H1AQ02539 TIPARP-207ENST00000542783 3681 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
HIST1H1AQ02539 EPPIN-202ENST00000354280 1987 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
HIST1H1AQ02539 AL359715.3-201ENST00000569267 2123 ntBASIC4.18□□□□□ -1.74
HIST1H1AQ02539 KCNJ1-206ENST00000440599 2539 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
HIST1H1AQ02539 STAG2-205ENST00000371160 6045 ntAPPRIS P3 TSL 1 (best) BASIC4.18□□□□□ -1.74
HIST1H1AQ02539 AC006206.1-201ENST00000544842 3387 ntBASIC4.17□□□□□ -1.74
HIST1H1AQ02539 HSPA8P18-201ENST00000439846 1928 ntBASIC4.17□□□□□ -1.74
HIST1H1AQ02539 PTPN13-202ENST00000411767 8119 ntAPPRIS ALT2 TSL 1 (best) BASIC4.17□□□□□ -1.74
HIST1H1AQ02539 MAPK6PS2-201ENST00000379571 2060 ntBASIC4.17□□□□□ -1.74
HIST1H1AQ02539 BNIP2-202ENST00000415213 1509 ntTSL 2 BASIC4.17□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 80.2 ms