Protein–RNA interactions for Protein: P61024

CKS1B, Cyclin-dependent kinases regulatory subunit 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP61024 AL133482.1-201ENST00000415988 498 ntBASIC3.87□□□□□ -1.79
CKS1BP61024 THEM7P-201ENST00000419556 672 ntBASIC3.87□□□□□ -1.79
CKS1BP61024 AL139008.2-201ENST00000420315 395 ntTSL 3 BASIC3.87□□□□□ -1.79
CKS1BP61024 AL031846.1-202ENST00000424436 592 ntTSL 2 BASIC3.87□□□□□ -1.79
CKS1BP61024 LINC01690-201ENST00000424837 576 ntTSL 2 BASIC3.87□□□□□ -1.79
CKS1BP61024 OR2AH1P-201ENST00000425717 928 ntBASIC3.87□□□□□ -1.79
CKS1BP61024 AC018832.1-201ENST00000428171 566 ntTSL 4 BASIC3.87□□□□□ -1.79
CKS1BP61024 AC128677.1-201ENST00000436016 442 ntBASIC3.87□□□□□ -1.79
CKS1BP61024 TUBB4BP6-201ENST00000437576 479 ntBASIC3.87□□□□□ -1.79
CKS1BP61024 AL359265.1-201ENST00000440296 795 ntBASIC3.87□□□□□ -1.79
CKS1BP61024 AC015983.1-201ENST00000441577 373 ntBASIC3.87□□□□□ -1.79
CKS1BP61024 PPIAP32-201ENST00000449940 472 ntBASIC3.87□□□□□ -1.79
CKS1BP61024 RPS23P2-201ENST00000463671 415 ntBASIC3.87□□□□□ -1.79
CKS1BP61024 AC023245.1-201ENST00000468501 517 ntBASIC3.87□□□□□ -1.79
CKS1BP61024 LINC01596-201ENST00000503609 592 ntTSL 2 BASIC3.87□□□□□ -1.79
CKS1BP61024 LINC02114-201ENST00000503757 801 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
CKS1BP61024 AC108063.1-201ENST00000513586 414 ntTSL 3 BASIC3.87□□□□□ -1.79
CKS1BP61024 CR383658.1-201ENST00000514609 734 ntBASIC3.87□□□□□ -1.79
CKS1BP61024 HSD3BP3-201ENST00000514706 994 ntBASIC3.87□□□□□ -1.79
CKS1BP61024 AC069272.1-201ENST00000514843 680 ntTSL 3 BASIC3.87□□□□□ -1.79
CKS1BP61024 MTHFD2P4-201ENST00000515074 1025 ntBASIC3.87□□□□□ -1.79
CKS1BP61024 AC060775.1-201ENST00000518241 520 ntBASIC3.87□□□□□ -1.79
CKS1BP61024 AC120193.1-201ENST00000518988 741 ntTSL 2 BASIC3.87□□□□□ -1.79
CKS1BP61024 OR7E158P-201ENST00000524483 910 ntBASIC3.87□□□□□ -1.79
CKS1BP61024 AC013549.3-201ENST00000528792 419 ntTSL 3 BASIC3.87□□□□□ -1.79
CKS1BP61024 AC091544.7-201ENST00000554000 240 ntTSL 3 BASIC3.87□□□□□ -1.79
CKS1BP61024 AC068446.3-201ENST00000555285 382 ntBASIC3.87□□□□□ -1.79
CKS1BP61024 LINC01580-202ENST00000555364 661 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
CKS1BP61024 AC040918.1-201ENST00000560056 632 ntTSL 2 BASIC3.87□□□□□ -1.79
CKS1BP61024 AC010325.1-202ENST00000562076 279 ntAPPRIS ALT2 TSL 1 (best) BASIC3.87□□□□□ -1.79
CKS1BP61024 AC018845.1-201ENST00000564193 744 ntTSL 2 BASIC3.87□□□□□ -1.79
CKS1BP61024 AC013640.1-201ENST00000565366 565 ntTSL 3 BASIC3.87□□□□□ -1.79
CKS1BP61024 AC087190.2-201ENST00000565648 731 ntTSL 3 BASIC3.87□□□□□ -1.79
CKS1BP61024 AC092376.1-201ENST00000569677 335 ntTSL 2 BASIC3.87□□□□□ -1.79
CKS1BP61024 LINC02565-201ENST00000592678 478 ntTSL 2 BASIC3.87□□□□□ -1.79
CKS1BP61024 SNHG8-202ENST00000602483 309 ntTSL 3 BASIC3.87□□□□□ -1.79
CKS1BP61024 QTRT1P1-201ENST00000604344 1078 ntBASIC3.87□□□□□ -1.79
CKS1BP61024 AC145423.1-201ENST00000605712 336 ntBASIC3.87□□□□□ -1.79
CKS1BP61024 AC090948.2-201ENST00000607363 564 ntBASIC3.87□□□□□ -1.79
CKS1BP61024 AC097467.3-215ENST00000609486 793 ntTSL 5 BASIC3.87□□□□□ -1.79
CKS1BP61024 AC097467.3-214ENST00000610249 843 ntTSL 5 BASIC3.87□□□□□ -1.79
CKS1BP61024 AL021918.2-201ENST00000613415 194 ntBASIC3.87□□□□□ -1.79
CKS1BP61024 FAM27E2-201ENST00000619668 403 ntBASIC3.87□□□□□ -1.79
CKS1BP61024 AC089999.3-201ENST00000622440 577 ntBASIC3.87□□□□□ -1.79
CKS1BP61024 AL356121.2-201ENST00000624715 780 ntBASIC3.87□□□□□ -1.79
CKS1BP61024 FP236241.1-206ENST00000625005 987 ntTSL 5 BASIC3.87□□□□□ -1.79
CKS1BP61024 AC134980.1-203ENST00000640541 570 ntTSL 4 BASIC3.87□□□□□ -1.79
CKS1BP61024 CNOT1-201ENST00000317147 8471 ntAPPRIS P3 TSL 1 (best) BASIC3.87□□□□□ -1.79
CKS1BP61024 ATF2-201ENST00000264110 4176 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
CKS1BP61024 RASGEF1B-207ENST00000509081 3016 ntAPPRIS ALT1 TSL 5 BASIC3.87□□□□□ -1.79
CKS1BP61024 FSHB-202ENST00000417547 1890 ntAPPRIS P1 TSL 5 BASIC3.87□□□□□ -1.79
CKS1BP61024 ZNF721-201ENST00000338977 4492 ntTSL 2 BASIC3.87□□□□□ -1.79
CKS1BP61024 LINC01189-201ENST00000428440 3321 ntTSL 2 BASIC3.87□□□□□ -1.79
CKS1BP61024 RUFY3-201ENST00000226328 4233 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
CKS1BP61024 AL929601.4-201ENST00000613011 1341 ntBASIC3.87□□□□□ -1.79
CKS1BP61024 MTERF1-202ENST00000406735 1639 ntAPPRIS ALT2 TSL 2 BASIC3.87□□□□□ -1.79
CKS1BP61024 F13B-201ENST00000367412 2217 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
CKS1BP61024 ZNF480-204ENST00000490272 2238 ntTSL 2 BASIC3.87□□□□□ -1.79
CKS1BP61024 MIR4500HG-201ENST00000436290 1675 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
CKS1BP61024 GRAMD2B-202ENST00000502348 1363 ntTSL 2 BASIC3.87□□□□□ -1.79
CKS1BP61024 TET1P1-201ENST00000426627 2301 ntBASIC3.87□□□□□ -1.79
CKS1BP61024 AL590399.5-201ENST00000428709 3325 ntTSL 2 BASIC3.87□□□□□ -1.79
CKS1BP61024 NKRF-202ENST00000371527 3741 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
CKS1BP61024 AC139713.2-215ENST00000641428 5037 ntBASIC3.86□□□□□ -1.79
CKS1BP61024 IREB2-201ENST00000258886 6354 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
CKS1BP61024 Z83820.1-201ENST00000456978 1499 ntBASIC3.86□□□□□ -1.79
CKS1BP61024 SLC2A3P1-201ENST00000519666 1451 ntBASIC3.86□□□□□ -1.79
CKS1BP61024 CDR1-201ENST00000370532 2467 ntAPPRIS P1 BASIC3.86□□□□□ -1.79
CKS1BP61024 IL31RA-204ENST00000396834 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC3.86□□□□□ -1.79
CKS1BP61024 SPINK5-202ENST00000359874 3656 ntAPPRIS ALT2 TSL 1 (best) BASIC3.86□□□□□ -1.79
CKS1BP61024 RNA5SP502-201ENST00000362694 119 ntBASIC3.86□□□□□ -1.79
CKS1BP61024 RN7SKP78-201ENST00000364711 318 ntBASIC3.86□□□□□ -1.79
CKS1BP61024 SPRR2E-202ENST00000368751 692 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
CKS1BP61024 TRDC-201ENST00000390477 720 ntAPPRIS P1 BASIC3.86□□□□□ -1.79
CKS1BP61024 TMBIM4-203ENST00000398033 844 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
CKS1BP61024 AL034417.1-201ENST00000399343 800 ntBASIC3.86□□□□□ -1.79
CKS1BP61024 RPL10P10-201ENST00000403509 664 ntBASIC3.86□□□□□ -1.79
CKS1BP61024 RNA5SP231-201ENST00000410496 138 ntBASIC3.86□□□□□ -1.79
CKS1BP61024 AC007966.1-201ENST00000421998 1179 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
CKS1BP61024 MTCO1P51-201ENST00000427672 1060 ntBASIC3.86□□□□□ -1.79
CKS1BP61024 RNASE9-203ENST00000429244 1084 ntAPPRIS P3 TSL 1 (best) BASIC3.86□□□□□ -1.79
CKS1BP61024 HMGB3P10-201ENST00000434734 572 ntBASIC3.86□□□□□ -1.79
CKS1BP61024 AC092601.1-201ENST00000444526 383 ntBASIC3.86□□□□□ -1.79
CKS1BP61024 AL031584.1-201ENST00000447169 754 ntBASIC3.86□□□□□ -1.79
CKS1BP61024 OR7E116P-201ENST00000448529 957 ntBASIC3.86□□□□□ -1.79
CKS1BP61024 AC013549.1-201ENST00000454086 566 ntTSL 3 BASIC3.86□□□□□ -1.79
CKS1BP61024 AC105021.1-201ENST00000455347 590 ntTSL 3 BASIC3.86□□□□□ -1.79
CKS1BP61024 H3F3AP5-201ENST00000475267 429 ntBASIC3.86□□□□□ -1.79
CKS1BP61024 RPS27P20-201ENST00000492051 246 ntBASIC3.86□□□□□ -1.79
CKS1BP61024 LINC00483-204ENST00000502517 940 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
CKS1BP61024 AC008957.1-202ENST00000512329 681 ntTSL 3 BASIC3.86□□□□□ -1.79
CKS1BP61024 AC098829.1-202ENST00000513384 537 ntTSL 3 BASIC3.86□□□□□ -1.79
CKS1BP61024 snoU109.6-201ENST00000516831 118 ntBASIC3.86□□□□□ -1.79
CKS1BP61024 SNHG1-219ENST00000542112 780 ntTSL 3 BASIC3.86□□□□□ -1.79
CKS1BP61024 AC078820.1-201ENST00000548702 742 ntTSL 3 BASIC3.86□□□□□ -1.79
CKS1BP61024 AC126615.2-201ENST00000553003 515 ntBASIC3.86□□□□□ -1.79
CKS1BP61024 AC010547.7-201ENST00000570323 333 ntBASIC3.86□□□□□ -1.79
CKS1BP61024 STARD6-202ENST00000577499 696 ntTSL 2 BASIC3.86□□□□□ -1.79
CKS1BP61024 AL353804.2-201ENST00000603360 347 ntTSL 5 BASIC3.86□□□□□ -1.79
CKS1BP61024 AC012368.3-201ENST00000604190 219 ntBASIC3.86□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 117.4 ms