Protein–RNA interactions for Protein: P54868

HMGCS2, Hydroxymethylglutaryl-CoA synthase, mitochondrial, humanhuman

Predictions only

Length 508 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS2P54868 AP002765.2-201ENST00000532961 666 ntTSL 3 BASIC6.13□□□□□ -1.43
HMGCS2P54868 RERG-AS1-201ENST00000541243 337 ntTSL 2 BASIC6.13□□□□□ -1.43
HMGCS2P54868 AC137768.1-201ENST00000549998 553 ntBASIC6.13□□□□□ -1.43
HMGCS2P54868 MGAT4C-206ENST00000552435 550 ntTSL 4 BASIC6.13□□□□□ -1.43
HMGCS2P54868 AC091117.1-201ENST00000560967 426 ntTSL 5 BASIC6.13□□□□□ -1.43
HMGCS2P54868 AC025271.2-201ENST00000566990 800 ntTSL 3 BASIC6.13□□□□□ -1.43
HMGCS2P54868 AC018558.3-201ENST00000567902 572 ntTSL 4 BASIC6.13□□□□□ -1.43
HMGCS2P54868 MIR4330-201ENST00000579077 105 ntBASIC6.13□□□□□ -1.43
HMGCS2P54868 AC009237.13-201ENST00000603193 276 ntBASIC6.13□□□□□ -1.43
HMGCS2P54868 uc_338.18-201ENST00000615451 175 ntBASIC6.13□□□□□ -1.43
HMGCS2P54868 AP001043.1-201ENST00000626259 773 ntTSL 5 BASIC6.13□□□□□ -1.43
HMGCS2P54868 NEK3-211ENST00000629912 141 ntTSL 5 BASIC6.13□□□□□ -1.43
HMGCS2P54868 AC232271.1-201ENST00000602455 2715 ntBASIC6.13□□□□□ -1.43
HMGCS2P54868 LINC01581-202ENST00000558874 3173 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
HMGCS2P54868 SEMA6D-210ENST00000558816 4419 ntTSL 5 BASIC6.13□□□□□ -1.43
HMGCS2P54868 CDH7-201ENST00000323011 2728 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
HMGCS2P54868 RCAN2-201ENST00000306764 3240 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
HMGCS2P54868 CHMP1B2P-202ENST00000614414 6813 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
HMGCS2P54868 OR10G7-202ENST00000641585 3449 ntAPPRIS P1 BASIC6.12□□□□□ -1.43
HMGCS2P54868 MAPRE2-202ENST00000413393 4173 ntAPPRIS ALT1 TSL 5 BASIC6.12□□□□□ -1.43
HMGCS2P54868 LIN7C-201ENST00000278193 4688 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
HMGCS2P54868 SLC26A7-210ENST00000617233 5257 ntAPPRIS P1 TSL 5 BASIC6.12□□□□□ -1.43
HMGCS2P54868 SPHKAP-201ENST00000344657 6804 ntAPPRIS P3 TSL 1 (best) BASIC6.12□□□□□ -1.43
HMGCS2P54868 ITCH-201ENST00000262650 3089 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
HMGCS2P54868 DDX3Y-201ENST00000336079 4445 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
HMGCS2P54868 DYRK1A-202ENST00000339659 8654 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
HMGCS2P54868 SPATA42-201ENST00000369989 535 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
HMGCS2P54868 SEPT7P2-202ENST00000398921 823 ntBASIC6.12□□□□□ -1.43
HMGCS2P54868 AL078599.1-201ENST00000402075 293 ntBASIC6.12□□□□□ -1.43
HMGCS2P54868 NUDT19P3-201ENST00000404698 555 ntBASIC6.12□□□□□ -1.43
HMGCS2P54868 MTERF1-202ENST00000406735 1639 ntAPPRIS ALT2 TSL 2 BASIC6.12□□□□□ -1.43
HMGCS2P54868 HMGB1P32-201ENST00000425971 565 ntBASIC6.12□□□□□ -1.43
HMGCS2P54868 RPS4XP16-201ENST00000427198 791 ntBASIC6.12□□□□□ -1.43
HMGCS2P54868 RHOT1P3-201ENST00000436571 331 ntBASIC6.12□□□□□ -1.43
HMGCS2P54868 CEACAMP9-201ENST00000442990 513 ntBASIC6.12□□□□□ -1.43
HMGCS2P54868 UBE2V2P4-201ENST00000447495 259 ntBASIC6.12□□□□□ -1.43
HMGCS2P54868 MORF4L1P4-201ENST00000450245 976 ntBASIC6.12□□□□□ -1.43
HMGCS2P54868 AC068489.1-201ENST00000453706 261 ntTSL 5 BASIC6.12□□□□□ -1.43
HMGCS2P54868 LINC02083-201ENST00000462835 515 ntTSL 3 BASIC6.12□□□□□ -1.43
HMGCS2P54868 AC138965.1-202ENST00000502354 547 ntTSL 5 BASIC6.12□□□□□ -1.43
HMGCS2P54868 AC105420.1-201ENST00000504389 582 ntBASIC6.12□□□□□ -1.43
HMGCS2P54868 AC140125.3-201ENST00000505248 547 ntTSL 4 BASIC6.12□□□□□ -1.43
HMGCS2P54868 AC093535.1-203ENST00000512500 730 ntTSL 3 BASIC6.12□□□□□ -1.43
HMGCS2P54868 LINC02429-202ENST00000513836 694 ntTSL 3 BASIC6.12□□□□□ -1.43
HMGCS2P54868 AC012400.1-201ENST00000518452 381 ntBASIC6.12□□□□□ -1.43
HMGCS2P54868 AP003696.1-201ENST00000519337 770 ntTSL 3 BASIC6.12□□□□□ -1.43
HMGCS2P54868 AC103853.1-201ENST00000520588 649 ntTSL 5 BASIC6.12□□□□□ -1.43
HMGCS2P54868 AP005436.1-201ENST00000531454 488 ntTSL 2 BASIC6.12□□□□□ -1.43
HMGCS2P54868 C14orf105-210ENST00000534126 1030 ntAPPRIS ALT1 TSL 1 (best) BASIC6.12□□□□□ -1.43
HMGCS2P54868 AC074031.1-201ENST00000550634 734 ntTSL 3 BASIC6.12□□□□□ -1.43
HMGCS2P54868 LINC00871-201ENST00000555246 408 ntTSL 5 BASIC6.12□□□□□ -1.43
HMGCS2P54868 AC027130.1-201ENST00000564490 686 ntTSL 2 BASIC6.12□□□□□ -1.43
HMGCS2P54868 MIR4691-201ENST00000583764 85 ntBASIC6.12□□□□□ -1.43
HMGCS2P54868 AC087283.1-201ENST00000604029 1074 ntBASIC6.12□□□□□ -1.43
HMGCS2P54868 AC009027.1-201ENST00000604510 479 ntBASIC6.12□□□□□ -1.43
HMGCS2P54868 DDX6-208ENST00000620157 6152 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
HMGCS2P54868 LINC00907-201ENST00000585627 3324 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
HMGCS2P54868 IFRD1-217ENST00000621379 3232 ntTSL 2 BASIC6.12□□□□□ -1.43
HMGCS2P54868 AC015799.1-201ENST00000622996 3122 ntBASIC6.12□□□□□ -1.43
HMGCS2P54868 CASP10-202ENST00000286186 5928 ntAPPRIS P4 TSL 1 (best) BASIC6.12□□□□□ -1.43
HMGCS2P54868 NEMF-201ENST00000298310 6234 ntAPPRIS P1 TSL 5 BASIC6.11□□□□□ -1.43
HMGCS2P54868 MMP12-201ENST00000571244 1874 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
HMGCS2P54868 MIPEPP2-201ENST00000422560 1819 ntBASIC6.11□□□□□ -1.43
HMGCS2P54868 SERPINB11-205ENST00000544088 1846 ntAPPRIS P1 TSL 2 BASIC6.11□□□□□ -1.43
HMGCS2P54868 RAPGEF2-201ENST00000264431 6949 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
HMGCS2P54868 TDO2-208ENST00000536354 1701 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
HMGCS2P54868 LINC02421-201ENST00000542219 3135 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
HMGCS2P54868 HECTD4-211ENST00000550722 15450 ntAPPRIS ALT2 TSL 5 BASIC6.11□□□□□ -1.43
HMGCS2P54868 AC012618.3-205ENST00000637896 1496 ntBASIC6.11□□□□□ -1.43
HMGCS2P54868 NAV1-201ENST00000367295 11645 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
HMGCS2P54868 C5orf51-204ENST00000612065 1391 ntTSL 5 BASIC6.11□□□□□ -1.43
HMGCS2P54868 LCA5L-218ENST00000485895 2551 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
HMGCS2P54868 AL353625.1-202ENST00000366273 571 ntBASIC6.11□□□□□ -1.43
HMGCS2P54868 MIR1182-201ENST00000408363 97 ntBASIC6.11□□□□□ -1.43
HMGCS2P54868 COX6B1P1-201ENST00000415962 213 ntBASIC6.11□□□□□ -1.43
HMGCS2P54868 OR2AM1P-201ENST00000422137 422 ntBASIC6.11□□□□□ -1.43
HMGCS2P54868 AL353689.2-201ENST00000433837 440 ntTSL 3 BASIC6.11□□□□□ -1.43
HMGCS2P54868 AL161621.1-201ENST00000444796 340 ntTSL 3 BASIC6.11□□□□□ -1.43
HMGCS2P54868 AC064807.2-201ENST00000521188 672 ntTSL 3 BASIC6.11□□□□□ -1.43
HMGCS2P54868 AC025437.5-201ENST00000522769 314 ntTSL 3 BASIC6.11□□□□□ -1.43
HMGCS2P54868 MIR4307HG-201ENST00000548170 822 ntTSL 3 BASIC6.11□□□□□ -1.43
HMGCS2P54868 NQO1-206ENST00000564043 892 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
HMGCS2P54868 AC015845.2-201ENST00000581805 472 ntTSL 2 BASIC6.11□□□□□ -1.43
HMGCS2P54868 AC006504.5-202ENST00000586784 656 ntTSL 2 BASIC6.11□□□□□ -1.43
HMGCS2P54868 AC005757.1-201ENST00000591432 472 ntTSL 4 BASIC6.11□□□□□ -1.43
HMGCS2P54868 AC011487.3-201ENST00000593607 453 ntBASIC6.11□□□□□ -1.43
HMGCS2P54868 ERVK-28-203ENST00000600419 457 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
HMGCS2P54868 AC079414.3-201ENST00000612986 1090 ntBASIC6.11□□□□□ -1.43
HMGCS2P54868 MIR6810-201ENST00000622701 70 ntBASIC6.11□□□□□ -1.43
HMGCS2P54868 EPB41L2-220ENST00000528282 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC6.11□□□□□ -1.43
HMGCS2P54868 AC022893.1-201ENST00000517664 3549 ntTSL 2 BASIC6.11□□□□□ -1.43
HMGCS2P54868 FAM197Y3-202ENST00000427622 2325 ntTSL 5 BASIC6.11□□□□□ -1.43
HMGCS2P54868 FAM197Y7-202ENST00000433321 2325 ntTSL 2 BASIC6.11□□□□□ -1.43
HMGCS2P54868 WDR63-201ENST00000294664 2995 ntAPPRIS P3 TSL 1 (best) BASIC6.11□□□□□ -1.43
HMGCS2P54868 WASHC4-202ENST00000332180 5812 ntAPPRIS P3 TSL 1 (best) BASIC6.11□□□□□ -1.43
HMGCS2P54868 NLGN4X-202ENST00000381092 3750 ntAPPRIS P2 TSL 2 BASIC6.11□□□□□ -1.43
HMGCS2P54868 DAZ1-206ENST00000620725 1891 ntTSL 5 BASIC6.11□□□□□ -1.43
HMGCS2P54868 GVINP1-201ENST00000526769 8438 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
HMGCS2P54868 TCF7L2-206ENST00000355995 4073 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
HMGCS2P54868 ALB-220ENST00000621628 1606 ntTSL 5 BASIC6.1□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 77 ms