Protein–RNA interactions for Protein: P53667

LIMK1, LIM domain kinase 1, humanhuman

Predictions only

Length 647 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1P53667 GTF3C3-202ENST00000409364 1736 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
LIMK1P53667 C4orf17-201ENST00000326581 1636 ntAPPRIS P2 TSL 1 (best) BASIC5.74□□□□□ -1.49
LIMK1P53667 EOGT-209ENST00000540955 1332 ntTSL 2 BASIC5.74□□□□□ -1.49
LIMK1P53667 EXO1-208ENST00000518483 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC5.73□□□□□ -1.49
LIMK1P53667 GABRA2-206ENST00000507460 5812 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
LIMK1P53667 NCOA7-208ENST00000438495 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC5.73□□□□□ -1.49
LIMK1P53667 MAPK10-341ENST00000641657 3860 ntAPPRIS P2 BASIC5.73□□□□□ -1.49
LIMK1P53667 AC104297.1-201ENST00000393779 870 ntBASIC5.73□□□□□ -1.49
LIMK1P53667 SLC3A1-203ENST00000409294 792 ntTSL 2 BASIC5.73□□□□□ -1.49
LIMK1P53667 RN7SKP166-201ENST00000410812 305 ntBASIC5.73□□□□□ -1.49
LIMK1P53667 RN7SKP29-201ENST00000410957 272 ntBASIC5.73□□□□□ -1.49
LIMK1P53667 RAB28P1-201ENST00000411517 641 ntBASIC5.73□□□□□ -1.49
LIMK1P53667 UBE2V1P14-201ENST00000415815 558 ntBASIC5.73□□□□□ -1.49
LIMK1P53667 AC073333.1-201ENST00000418907 648 ntTSL 3 BASIC5.73□□□□□ -1.49
LIMK1P53667 SOS1-IT1-201ENST00000420644 539 ntTSL 5 BASIC5.73□□□□□ -1.49
LIMK1P53667 SRSF1P1-201ENST00000424058 520 ntBASIC5.73□□□□□ -1.49
LIMK1P53667 AL590399.2-201ENST00000427536 309 ntBASIC5.73□□□□□ -1.49
LIMK1P53667 RPL7L1P9-201ENST00000431298 745 ntBASIC5.73□□□□□ -1.49
LIMK1P53667 LINC02257-202ENST00000433576 720 ntTSL 5 BASIC5.73□□□□□ -1.49
LIMK1P53667 AC013733.1-201ENST00000449835 985 ntTSL 4 BASIC5.73□□□□□ -1.49
LIMK1P53667 AP000472.1-201ENST00000452500 530 ntTSL 2 BASIC5.73□□□□□ -1.49
LIMK1P53667 AL022329.1-203ENST00000453811 451 ntTSL 3 BASIC5.73□□□□□ -1.49
LIMK1P53667 AZGP1P2-201ENST00000454506 345 ntBASIC5.73□□□□□ -1.49
LIMK1P53667 RANP1-206ENST00000455094 651 ntBASIC5.73□□□□□ -1.49
LIMK1P53667 AC093166.4-201ENST00000457867 318 ntBASIC5.73□□□□□ -1.49
LIMK1P53667 RPS3AP15-201ENST00000483874 781 ntBASIC5.73□□□□□ -1.49
LIMK1P53667 SNORA70.11-201ENST00000515987 138 ntBASIC5.73□□□□□ -1.49
LIMK1P53667 SNORA70.13-201ENST00000516116 138 ntBASIC5.73□□□□□ -1.49
LIMK1P53667 AC087664.1-201ENST00000521456 358 ntTSL 3 BASIC5.73□□□□□ -1.49
LIMK1P53667 MRPS16P1-201ENST00000523462 412 ntBASIC5.73□□□□□ -1.49
LIMK1P53667 LGALS8-217ENST00000525042 903 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
LIMK1P53667 AC100821.2-201ENST00000565668 440 ntTSL 2 BASIC5.73□□□□□ -1.49
LIMK1P53667 PWRN1-208ENST00000567647 561 ntTSL 5 BASIC5.73□□□□□ -1.49
LIMK1P53667 MIR3691-201ENST00000578066 90 ntBASIC5.73□□□□□ -1.49
LIMK1P53667 AC090125.1-201ENST00000581541 493 ntTSL 3 BASIC5.73□□□□□ -1.49
LIMK1P53667 CT45A1-202ENST00000594565 1007 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
LIMK1P53667 AC020915.5-201ENST00000596836 964 ntBASIC5.73□□□□□ -1.49
LIMK1P53667 AC092316.1-201ENST00000598703 297 ntTSL 5 BASIC5.73□□□□□ -1.49
LIMK1P53667 AC243960.3-202ENST00000599770 594 ntTSL 4 BASIC5.73□□□□□ -1.49
LIMK1P53667 LINC01050-201ENST00000604485 760 ntTSL 3 BASIC5.73□□□□□ -1.49
LIMK1P53667 AL121890.2-201ENST00000617644 465 ntBASIC5.73□□□□□ -1.49
LIMK1P53667 AC010435.1-201ENST00000623353 1177 ntBASIC5.73□□□□□ -1.49
LIMK1P53667 AC000095.2-202ENST00000637415 154 ntBASIC5.73□□□□□ -1.49
LIMK1P53667 AL355488.2-201ENST00000609909 2850 ntBASIC5.73□□□□□ -1.49
LIMK1P53667 SRGAP1-207ENST00000631006 8406 ntTSL 5 BASIC5.73□□□□□ -1.49
LIMK1P53667 ARHGEF9-229ENST00000637040 5001 ntTSL 5 BASIC5.73□□□□□ -1.49
LIMK1P53667 SON-204ENST00000381692 2463 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
LIMK1P53667 FAM135A-202ENST00000361499 5042 ntAPPRIS ALT1 TSL 1 (best) BASIC5.73□□□□□ -1.49
LIMK1P53667 R3HDM1-202ENST00000409478 4272 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
LIMK1P53667 ZNF248-201ENST00000357328 4795 ntAPPRIS P1 TSL 2 BASIC5.72□□□□□ -1.49
LIMK1P53667 LINC02421-201ENST00000542219 3135 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
LIMK1P53667 ICE2-201ENST00000261520 7209 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
LIMK1P53667 GCNT2-201ENST00000265012 4214 ntAPPRIS P3 TSL 1 (best) BASIC5.72□□□□□ -1.49
LIMK1P53667 ASAH2-202ENST00000395526 6880 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
LIMK1P53667 OR7G2-201ENST00000305456 1038 ntAPPRIS P2 BASIC5.72□□□□□ -1.49
LIMK1P53667 MRRF-207ENST00000373729 870 ntTSL 3 BASIC5.72□□□□□ -1.49
LIMK1P53667 ARAFP1-201ENST00000422172 605 ntBASIC5.72□□□□□ -1.49
LIMK1P53667 LINC01798-203ENST00000428590 553 ntTSL 4 BASIC5.72□□□□□ -1.49
LIMK1P53667 AL353693.1-201ENST00000429567 442 ntTSL 3 BASIC5.72□□□□□ -1.49
LIMK1P53667 CYCSP12-201ENST00000437729 300 ntBASIC5.72□□□□□ -1.49
LIMK1P53667 AC008269.1-201ENST00000438070 646 ntTSL 3 BASIC5.72□□□□□ -1.49
LIMK1P53667 AC006466.1-201ENST00000438721 289 ntBASIC5.72□□□□□ -1.49
LIMK1P53667 AC105271.1-201ENST00000442876 497 ntTSL 3 BASIC5.72□□□□□ -1.49
LIMK1P53667 CASP12-208ENST00000448103 1071 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
LIMK1P53667 RPL23AP60-201ENST00000450011 454 ntBASIC5.72□□□□□ -1.49
LIMK1P53667 TFDP2-211ENST00000479040 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC5.72□□□□□ -1.49
LIMK1P53667 RPL7P6-201ENST00000480903 738 ntBASIC5.72□□□□□ -1.49
LIMK1P53667 CASP12-210ENST00000494737 961 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
LIMK1P53667 RNA5SP400-201ENST00000517155 111 ntBASIC5.72□□□□□ -1.49
LIMK1P53667 AC103853.1-201ENST00000520588 649 ntTSL 5 BASIC5.72□□□□□ -1.49
LIMK1P53667 AF117829.1-208ENST00000521996 915 ntTSL 3 BASIC5.72□□□□□ -1.49
LIMK1P53667 AC018442.3-201ENST00000523025 183 ntBASIC5.72□□□□□ -1.49
LIMK1P53667 OR6M2P-201ENST00000529831 871 ntBASIC5.72□□□□□ -1.49
LIMK1P53667 PPFIA2-AS1-202ENST00000549161 1080 ntTSL 3 BASIC5.72□□□□□ -1.49
LIMK1P53667 AC020612.3-201ENST00000550644 570 ntTSL 2 BASIC5.72□□□□□ -1.49
LIMK1P53667 MEG8-217ENST00000556637 924 ntTSL 5 BASIC5.72□□□□□ -1.49
LIMK1P53667 AC009268.1-201ENST00000561352 1203 ntBASIC5.72□□□□□ -1.49
LIMK1P53667 AC018557.2-201ENST00000565082 536 ntTSL 5 BASIC5.72□□□□□ -1.49
LIMK1P53667 ARL2BPP3-202ENST00000580773 420 ntTSL 5 BASIC5.72□□□□□ -1.49
LIMK1P53667 PSMG2-204ENST00000585331 983 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
LIMK1P53667 AC114684.1-201ENST00000587659 352 ntTSL 3 BASIC5.72□□□□□ -1.49
LIMK1P53667 LINC01835-202ENST00000589345 450 ntTSL 3 BASIC5.72□□□□□ -1.49
LIMK1P53667 AC243960.1-203ENST00000595395 599 ntTSL 4 BASIC5.72□□□□□ -1.49
LIMK1P53667 AC133644.2-201ENST00000608142 540 ntBASIC5.72□□□□□ -1.49
LIMK1P53667 AL135786.2-201ENST00000608422 615 ntBASIC5.72□□□□□ -1.49
LIMK1P53667 AL163952.1-201ENST00000612704 916 ntTSL 5 BASIC5.72□□□□□ -1.49
LIMK1P53667 Metazoa_SRP.170-201ENST00000616060 254 ntBASIC5.72□□□□□ -1.49
LIMK1P53667 NADK2-211ENST00000617628 744 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
LIMK1P53667 AL590410.1-201ENST00000617925 333 ntBASIC5.72□□□□□ -1.49
LIMK1P53667 ATP13A5-205ENST00000620313 709 ntTSL 5 BASIC5.72□□□□□ -1.49
LIMK1P53667 AP001005.3-201ENST00000622049 129 ntBASIC5.72□□□□□ -1.49
LIMK1P53667 AL359094.1-202ENST00000629917 1113 ntTSL 5 BASIC5.72□□□□□ -1.49
LIMK1P53667 AC136428.4-201ENST00000634254 1155 ntBASIC5.72□□□□□ -1.49
LIMK1P53667 ZNF615-213ENST00000602063 4094 ntAPPRIS P3 TSL 5 BASIC5.72□□□□□ -1.49
LIMK1P53667 MPDZ-202ENST00000319217 7722 ntAPPRIS ALT2 TSL 5 BASIC5.72□□□□□ -1.49
LIMK1P53667 ANXA1-201ENST00000257497 1509 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
LIMK1P53667 RAB3GAP1-207ENST00000539493 3161 ntTSL 5 BASIC5.72□□□□□ -1.49
LIMK1P53667 FSTL5-201ENST00000306100 4831 ntAPPRIS P3 TSL 1 (best) BASIC5.72□□□□□ -1.49
LIMK1P53667 LINC02401-201ENST00000550185 3059 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
LIMK1P53667 RGSL1-201ENST00000294854 3696 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 94.4 ms