Protein–RNA interactions for Protein: P53621

COPA, Coatomer subunit alpha, humanhuman

Predictions only

Length 1,224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPAP53621 SNORA51.1-201ENST00000363243 140 ntBASIC6.12□□□□□ -1.43
COPAP53621 GRIK2-203ENST00000369134 4185 ntTSL 5 BASIC6.12□□□□□ -1.43
COPAP53621 RN7SKP17-201ENST00000411242 351 ntBASIC6.12□□□□□ -1.43
COPAP53621 AC002524.1-201ENST00000411687 547 ntBASIC6.12□□□□□ -1.43
COPAP53621 AC011752.1-203ENST00000417609 582 ntTSL 2 BASIC6.12□□□□□ -1.43
COPAP53621 NPHP1-204ENST00000417665 2246 ntTSL 5 BASIC6.12□□□□□ -1.43
COPAP53621 LINC01945-201ENST00000419784 840 ntTSL 2 BASIC6.12□□□□□ -1.43
COPAP53621 RPS15AP30-201ENST00000420976 390 ntBASIC6.12□□□□□ -1.43
COPAP53621 C14orf105-202ENST00000422976 1153 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
COPAP53621 GRM7-AS3-203ENST00000424366 486 ntTSL 3 BASIC6.12□□□□□ -1.43
COPAP53621 AC000095.2-201ENST00000424407 768 ntTSL 2 BASIC6.12□□□□□ -1.43
COPAP53621 MTND4LP13-201ENST00000425022 298 ntBASIC6.12□□□□□ -1.43
COPAP53621 ICA1L-210ENST00000425178 879 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
COPAP53621 AL669841.1-201ENST00000425723 558 ntTSL 2 BASIC6.12□□□□□ -1.43
COPAP53621 AC113412.1-201ENST00000425840 504 ntBASIC6.12□□□□□ -1.43
COPAP53621 SLC36A1-202ENST00000429484 977 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
COPAP53621 HMGB3P10-201ENST00000434734 572 ntBASIC6.12□□□□□ -1.43
COPAP53621 AC023481.1-201ENST00000435368 938 ntTSL 3 BASIC6.12□□□□□ -1.43
COPAP53621 RBPJP7-201ENST00000442803 1447 ntBASIC6.12□□□□□ -1.43
COPAP53621 AL161636.2-201ENST00000445179 927 ntBASIC6.12□□□□□ -1.43
COPAP53621 LARGE-IT1-201ENST00000445391 558 ntTSL 4 BASIC6.12□□□□□ -1.43
COPAP53621 CATSPER2P1-205ENST00000446479 419 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
COPAP53621 GAS5-218ENST00000448718 565 ntTSL 2 BASIC6.12□□□□□ -1.43
COPAP53621 RBPJP5-201ENST00000449433 1447 ntBASIC6.12□□□□□ -1.43
COPAP53621 GNL2P1-201ENST00000451274 2190 ntBASIC6.12□□□□□ -1.43
COPAP53621 CLIC4P1-201ENST00000453177 535 ntBASIC6.12□□□□□ -1.43
COPAP53621 HDAC1P2-201ENST00000453661 1398 ntBASIC6.12□□□□□ -1.43
COPAP53621 PCGEM1-201ENST00000454040 1590 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
COPAP53621 AC093801.2-201ENST00000503966 1050 ntBASIC6.12□□□□□ -1.43
COPAP53621 AC008945.1-201ENST00000505144 499 ntBASIC6.12□□□□□ -1.43
COPAP53621 AC113349.1-201ENST00000512105 583 ntTSL 4 BASIC6.12□□□□□ -1.43
COPAP53621 AC093535.1-201ENST00000515808 747 ntTSL 3 BASIC6.12□□□□□ -1.43
COPAP53621 AC097173.2-201ENST00000518701 474 ntTSL 3 BASIC6.12□□□□□ -1.43
COPAP53621 AC008601.1-201ENST00000519892 527 ntTSL 4 BASIC6.12□□□□□ -1.43
COPAP53621 AC008575.1-201ENST00000520401 694 ntAPPRIS P1 TSL 3 BASIC6.12□□□□□ -1.43
COPAP53621 AP001318.3-202ENST00000528876 509 ntTSL 3 BASIC6.12□□□□□ -1.43
COPAP53621 AC027544.3-201ENST00000535082 757 ntBASIC6.12□□□□□ -1.43
COPAP53621 AP003037.1-201ENST00000537594 267 ntTSL 5 BASIC6.12□□□□□ -1.43
COPAP53621 OR52E8-201ENST00000537935 1061 ntAPPRIS P1 BASIC6.12□□□□□ -1.43
COPAP53621 LINC02411-203ENST00000546180 959 ntTSL 4 BASIC6.12□□□□□ -1.43
COPAP53621 AC027808.1-201ENST00000560873 683 ntTSL 3 BASIC6.12□□□□□ -1.43
COPAP53621 AC087516.1-201ENST00000561236 2428 ntBASIC6.12□□□□□ -1.43
COPAP53621 TMEM159-205ENST00000572599 713 ntAPPRIS P1 TSL 5 BASIC6.12□□□□□ -1.43
COPAP53621 RNU4ATAC-201ENST00000580972 127 ntBASIC6.12□□□□□ -1.43
COPAP53621 AC005726.5-201ENST00000585189 298 ntTSL 5 BASIC6.12□□□□□ -1.43
COPAP53621 AC004596.1-201ENST00000586560 528 ntTSL 3 BASIC6.12□□□□□ -1.43
COPAP53621 AC245884.10-201ENST00000597355 337 ntBASIC6.12□□□□□ -1.43
COPAP53621 AC008750.7-201ENST00000600765 559 ntTSL 4 BASIC6.12□□□□□ -1.43
COPAP53621 AL136131.3-201ENST00000607600 188 ntBASIC6.12□□□□□ -1.43
COPAP53621 AC126175.1-201ENST00000617041 758 ntBASIC6.12□□□□□ -1.43
COPAP53621 CU638689.1-201ENST00000623225 897 ntTSL 3 BASIC6.12□□□□□ -1.43
COPAP53621 CU634019.4-201ENST00000623347 897 ntTSL 3 BASIC6.12□□□□□ -1.43
COPAP53621 AC003992.1-201ENST00000635364 557 ntBASIC6.12□□□□□ -1.43
COPAP53621 AP002008.2-205ENST00000637111 1091 ntTSL 5 BASIC6.12□□□□□ -1.43
COPAP53621 AC000095.2-202ENST00000637415 154 ntBASIC6.12□□□□□ -1.43
COPAP53621 CTTNBP2NL-201ENST00000271277 5897 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
COPAP53621 GRIK1-201ENST00000327783 3179 ntTSL 5 BASIC6.12□□□□□ -1.43
COPAP53621 AC019080.1-201ENST00000397057 5202 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
COPAP53621 FRAS1-207ENST00000512123 15624 ntAPPRIS P1 TSL 5 BASIC6.12□□□□□ -1.43
COPAP53621 KLHL13-206ENST00000469946 2353 ntTSL 2 BASIC6.11□□□□□ -1.43
COPAP53621 ADGRL2-202ENST00000359929 4674 ntAPPRIS P2 TSL 1 (best) BASIC6.11□□□□□ -1.43
COPAP53621 AL355834.1-201ENST00000556602 3965 ntBASIC6.11□□□□□ -1.43
COPAP53621 TCF7L2-222ENST00000627217 3680 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
COPAP53621 CSNK1G1-204ENST00000606793 1658 ntTSL 5 BASIC6.11□□□□□ -1.43
COPAP53621 LGI1-212ENST00000630184 2936 ntTSL 2 BASIC6.11□□□□□ -1.43
COPAP53621 TTC37-201ENST00000358746 5706 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
COPAP53621 PI15-202ENST00000523773 1413 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
COPAP53621 NOX4-205ENST00000424319 4184 ntTSL 5 BASIC6.11□□□□□ -1.43
COPAP53621 KYNUP3-201ENST00000574386 1341 ntBASIC6.11□□□□□ -1.43
COPAP53621 BPY2-201ENST00000331070 1206 ntAPPRIS P5 TSL 1 (best) BASIC6.11□□□□□ -1.43
COPAP53621 SPINK14-201ENST00000356972 294 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
COPAP53621 SNORD1C-201ENST00000363315 78 ntBASIC6.11□□□□□ -1.43
COPAP53621 RNU105B-201ENST00000364478 208 ntBASIC6.11□□□□□ -1.43
COPAP53621 C9orf153-202ENST00000376001 409 ntAPPRIS ALT2 TSL 3 BASIC6.11□□□□□ -1.43
COPAP53621 BPY2C-201ENST00000382287 1206 ntAPPRIS P5 TSL 1 (best) BASIC6.11□□□□□ -1.43
COPAP53621 BPY2B-201ENST00000382392 1206 ntAPPRIS P5 TSL 1 (best) BASIC6.11□□□□□ -1.43
COPAP53621 FAIM-204ENST00000393035 946 ntAPPRIS P3 TSL 1 (best) BASIC6.11□□□□□ -1.43
COPAP53621 ZNF365-203ENST00000395249 433 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
COPAP53621 NPM1P37-201ENST00000403105 874 ntBASIC6.11□□□□□ -1.43
COPAP53621 BTF3P9-201ENST00000418784 283 ntBASIC6.11□□□□□ -1.43
COPAP53621 DSTNP5-201ENST00000427921 523 ntBASIC6.11□□□□□ -1.43
COPAP53621 AL606534.3-201ENST00000437499 373 ntTSL 5 BASIC6.11□□□□□ -1.43
COPAP53621 MIR4435-2HG-209ENST00000441075 704 ntTSL 5 BASIC6.11□□□□□ -1.43
COPAP53621 AL357052.1-201ENST00000443504 381 ntTSL 3 BASIC6.11□□□□□ -1.43
COPAP53621 AC016027.4-201ENST00000450866 277 ntBASIC6.11□□□□□ -1.43
COPAP53621 AC073594.1-201ENST00000462065 364 ntBASIC6.11□□□□□ -1.43
COPAP53621 AL122020.1-201ENST00000472287 459 ntBASIC6.11□□□□□ -1.43
COPAP53621 Metazoa_SRP.158-201ENST00000487171 294 ntBASIC6.11□□□□□ -1.43
COPAP53621 RN7SL205P-201ENST00000490174 284 ntBASIC6.11□□□□□ -1.43
COPAP53621 NAMPTP2-201ENST00000505629 1115 ntBASIC6.11□□□□□ -1.43
COPAP53621 AZIN1-AS1-208ENST00000519257 619 ntTSL 3 BASIC6.11□□□□□ -1.43
COPAP53621 WBP1LP3-201ENST00000523033 208 ntBASIC6.11□□□□□ -1.43
COPAP53621 C1DP5-201ENST00000525775 383 ntBASIC6.11□□□□□ -1.43
COPAP53621 OR6M2P-201ENST00000529831 871 ntBASIC6.11□□□□□ -1.43
COPAP53621 AL049629.1-201ENST00000534431 648 ntTSL 3 BASIC6.11□□□□□ -1.43
COPAP53621 NPM1P42-201ENST00000560329 862 ntBASIC6.11□□□□□ -1.43
COPAP53621 THSD4-AS1-201ENST00000561571 554 ntTSL 5 BASIC6.11□□□□□ -1.43
COPAP53621 ZNF322P1-201ENST00000568013 1209 ntBASIC6.11□□□□□ -1.43
COPAP53621 AC145207.6-201ENST00000579981 782 ntTSL 5 BASIC6.11□□□□□ -1.43
COPAP53621 MIR4776-2-201ENST00000580204 80 ntBASIC6.11□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 72.7 ms