Protein–RNA interactions for Protein: P25067

COL8A2, Collagen alpha-2(VIII) chain, humanhuman

Predictions only

Length 703 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A2P25067 IQCG-201ENST00000265239 2262 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
COL8A2P25067 AC006600.2-201ENST00000624834 2506 ntBASIC4.54□□□□□ -1.68
COL8A2P25067 AP005212.5-201ENST00000577614 3505 ntTSL 5 BASIC4.54□□□□□ -1.68
COL8A2P25067 MAPK10-328ENST00000641553 4009 ntBASIC4.54□□□□□ -1.68
COL8A2P25067 RAB3GAP1-207ENST00000539493 3161 ntTSL 5 BASIC4.54□□□□□ -1.68
COL8A2P25067 MDN1-201ENST00000369393 18413 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
COL8A2P25067 LINC01206-204ENST00000482787 9580 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
COL8A2P25067 LMO3-201ENST00000261169 3810 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
COL8A2P25067 OR55B1P-203ENST00000641518 2602 ntBASIC4.54□□□□□ -1.68
COL8A2P25067 ZNF382-201ENST00000292928 8329 ntAPPRIS P3 TSL 1 (best) BASIC4.54□□□□□ -1.68
COL8A2P25067 CASC1-201ENST00000320267 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC4.54□□□□□ -1.68
COL8A2P25067 PI15-202ENST00000523773 1413 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
COL8A2P25067 FOXN2-203ENST00000616844 1414 ntTSL 5 BASIC4.54□□□□□ -1.68
COL8A2P25067 OAZ3-204ENST00000479764 3789 ntTSL 5 BASIC4.54□□□□□ -1.68
COL8A2P25067 OR9K1P-202ENST00000641111 3217 ntBASIC4.53□□□□□ -1.68
COL8A2P25067 VDAC3-201ENST00000022615 1355 ntAPPRIS P3 TSL 1 (best) BASIC4.53□□□□□ -1.68
COL8A2P25067 SEC31A-217ENST00000505984 3596 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
COL8A2P25067 KLHL5-202ENST00000261426 3300 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
COL8A2P25067 C15orf54-202ENST00000625107 3078 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
COL8A2P25067 OR2L13-202ENST00000641714 1948 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
COL8A2P25067 PAGE2B-202ENST00000374974 456 ntTSL 5 BASIC4.53□□□□□ -1.68
COL8A2P25067 OR2J2-202ENST00000377167 1272 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
COL8A2P25067 PIGP-204ENST00000399102 688 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
COL8A2P25067 LINC01047-201ENST00000415193 778 ntTSL 5 BASIC4.53□□□□□ -1.68
COL8A2P25067 AL132796.1-201ENST00000421617 479 ntTSL 3 BASIC4.53□□□□□ -1.68
COL8A2P25067 REREP1Y-201ENST00000422655 198 ntBASIC4.53□□□□□ -1.68
COL8A2P25067 MORF4L2-205ENST00000423833 717 ntTSL 5 BASIC4.53□□□□□ -1.68
COL8A2P25067 AC093655.2-201ENST00000425735 631 ntBASIC4.53□□□□□ -1.68
COL8A2P25067 HNRNPA1P29-201ENST00000426409 879 ntBASIC4.53□□□□□ -1.68
COL8A2P25067 RPL12P17-201ENST00000432393 498 ntBASIC4.53□□□□□ -1.68
COL8A2P25067 GAPDHP58-201ENST00000438477 1006 ntBASIC4.53□□□□□ -1.68
COL8A2P25067 LINC00969-211ENST00000438608 525 ntTSL 5 BASIC4.53□□□□□ -1.68
COL8A2P25067 REREP2Y-201ENST00000439103 200 ntBASIC4.53□□□□□ -1.68
COL8A2P25067 AC079117.1-201ENST00000445178 1000 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
COL8A2P25067 GAPDHP25-201ENST00000447061 1001 ntBASIC4.53□□□□□ -1.68
COL8A2P25067 AC008410.1-201ENST00000483777 339 ntBASIC4.53□□□□□ -1.68
COL8A2P25067 AC015864.1-201ENST00000496512 544 ntBASIC4.53□□□□□ -1.68
COL8A2P25067 RNA5SP373-201ENST00000517271 95 ntBASIC4.53□□□□□ -1.68
COL8A2P25067 POU1F1-203ENST00000560656 647 ntTSL 5 BASIC4.53□□□□□ -1.68
COL8A2P25067 MIR3691-201ENST00000578066 90 ntBASIC4.53□□□□□ -1.68
COL8A2P25067 AL445222.1-201ENST00000607259 628 ntBASIC4.53□□□□□ -1.68
COL8A2P25067 IFI16-204ENST00000368131 2734 ntAPPRIS P3 TSL 1 (best) BASIC4.53□□□□□ -1.68
COL8A2P25067 SLC4A7-206ENST00000428386 7385 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
COL8A2P25067 RRP15-201ENST00000366932 7771 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
COL8A2P25067 TRIQK-211ENST00000520430 1829 ntAPPRIS P1 TSL 2 BASIC4.53□□□□□ -1.68
COL8A2P25067 DIAPH3-208ENST00000498416 2249 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
COL8A2P25067 GABRA2-206ENST00000507460 5812 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
COL8A2P25067 MMRN1-201ENST00000264790 4967 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
COL8A2P25067 CDH19-201ENST00000262150 6341 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
COL8A2P25067 OR10A6-204ENST00000642108 6104 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
COL8A2P25067 EEF1A1P14-201ENST00000421195 1376 ntBASIC4.53□□□□□ -1.69
COL8A2P25067 SAMM50P1-201ENST00000455403 1399 ntBASIC4.53□□□□□ -1.69
COL8A2P25067 POLR2B-213ENST00000639658 3300 ntTSL 5 BASIC4.52□□□□□ -1.69
COL8A2P25067 VSNL1-203ENST00000406397 2725 ntAPPRIS P1 TSL 5 BASIC4.52□□□□□ -1.69
COL8A2P25067 ERCC6L-201ENST00000334463 4243 ntAPPRIS P2 TSL 1 (best) BASIC4.52□□□□□ -1.69
COL8A2P25067 MAMDC2-AS1-201ENST00000377178 1504 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
COL8A2P25067 N4BP2L2-IT2-201ENST00000629393 4890 ntBASIC4.52□□□□□ -1.69
COL8A2P25067 AC090220.1-201ENST00000593078 1699 ntBASIC4.52□□□□□ -1.69
COL8A2P25067 SLC1A2-203ENST00000395753 11689 ntAPPRIS ALT1 TSL 2 BASIC4.52□□□□□ -1.69
COL8A2P25067 AL078621.3-201ENST00000623707 2042 ntBASIC4.52□□□□□ -1.69
COL8A2P25067 DLEU7-AS1-201ENST00000413510 1806 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
COL8A2P25067 FAS-205ENST00000357339 1044 ntAPPRIS ALT2 TSL 1 (best) BASIC4.52□□□□□ -1.69
COL8A2P25067 AMELX-202ENST00000380712 835 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
COL8A2P25067 AMELX-203ENST00000380714 793 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
COL8A2P25067 DUTP5-201ENST00000406790 469 ntBASIC4.52□□□□□ -1.69
COL8A2P25067 RNU6ATAC21P-201ENST00000408656 126 ntBASIC4.52□□□□□ -1.69
COL8A2P25067 AC008060.2-201ENST00000415333 468 ntTSL 3 BASIC4.52□□□□□ -1.69
COL8A2P25067 LINC01798-203ENST00000428590 553 ntTSL 4 BASIC4.52□□□□□ -1.69
COL8A2P25067 LINC02210-201ENST00000444561 288 ntBASIC4.52□□□□□ -1.69
COL8A2P25067 AC073072.2-201ENST00000447425 348 ntBASIC4.52□□□□□ -1.69
COL8A2P25067 BX546450.1-201ENST00000454307 482 ntTSL 2 BASIC4.52□□□□□ -1.69
COL8A2P25067 LINC01436-201ENST00000457157 1048 ntTSL 2 BASIC4.52□□□□□ -1.69
COL8A2P25067 PSAT1P4-201ENST00000466500 526 ntBASIC4.52□□□□□ -1.69
COL8A2P25067 RPL7P40-201ENST00000481703 745 ntBASIC4.52□□□□□ -1.69
COL8A2P25067 AC058823.1-201ENST00000485315 474 ntBASIC4.52□□□□□ -1.69
COL8A2P25067 AC055758.1-201ENST00000494509 569 ntTSL 3 BASIC4.52□□□□□ -1.69
COL8A2P25067 RN7SL808P-201ENST00000496066 299 ntBASIC4.52□□□□□ -1.69
COL8A2P25067 NDUFA5P12-201ENST00000503796 343 ntBASIC4.52□□□□□ -1.69
COL8A2P25067 RPS4XP20-201ENST00000505751 772 ntBASIC4.52□□□□□ -1.69
COL8A2P25067 NPM1P21-201ENST00000513394 762 ntBASIC4.52□□□□□ -1.69
COL8A2P25067 AC109830.1-202ENST00000515491 860 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
COL8A2P25067 YWHABP2-201ENST00000540201 713 ntBASIC4.52□□□□□ -1.69
COL8A2P25067 AC087477.3-201ENST00000559214 552 ntTSL 4 BASIC4.52□□□□□ -1.69
COL8A2P25067 AC016839.1-201ENST00000578162 867 ntBASIC4.52□□□□□ -1.69
COL8A2P25067 AC002128.2-201ENST00000604161 618 ntTSL 5 BASIC4.52□□□□□ -1.69
COL8A2P25067 AC026786.2-201ENST00000606110 392 ntTSL 3 BASIC4.52□□□□□ -1.69
COL8A2P25067 AL121612.2-201ENST00000612261 482 ntBASIC4.52□□□□□ -1.69
COL8A2P25067 RPSAP73-201ENST00000614820 330 ntBASIC4.52□□□□□ -1.69
COL8A2P25067 AC037198.3-201ENST00000616754 526 ntBASIC4.52□□□□□ -1.69
COL8A2P25067 ST8SIA4-201ENST00000231461 6303 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
COL8A2P25067 TEK-205ENST00000615002 4666 ntTSL 5 BASIC4.52□□□□□ -1.69
COL8A2P25067 GAPT-202ENST00000396776 3016 ntAPPRIS P1 TSL 2 BASIC4.52□□□□□ -1.69
COL8A2P25067 ZNF733P-202ENST00000444809 1573 ntBASIC4.52□□□□□ -1.69
COL8A2P25067 AC007938.2-201ENST00000604666 2634 ntBASIC4.52□□□□□ -1.69
COL8A2P25067 OR1A1-203ENST00000641732 3832 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
COL8A2P25067 AC099329.2-203ENST00000471537 3605 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
COL8A2P25067 ADGRL2-209ENST00000370727 5164 ntTSL 5 BASIC4.52□□□□□ -1.69
COL8A2P25067 FGL2-201ENST00000248598 4261 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
COL8A2P25067 CFAP47-202ENST00000313548 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC4.51□□□□□ -1.69
COL8A2P25067 ARHGAP5-206ENST00000539826 4881 ntAPPRIS P3 TSL 1 (best) BASIC4.51□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 101.9 ms