Protein–RNA interactions for Protein: P19838

NFKB1, Nuclear factor NF-kappa-B p105 subunit, humanhuman

Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1P19838 SYT4-201ENST00000255224 4110 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
NFKB1P19838 SLC4A4-204ENST00000425175 7596 ntTSL 5 BASIC7.17□□□□□ -1.26
NFKB1P19838 IARS-206ENST00000447699 4186 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
NFKB1P19838 ERLIN2-201ENST00000276461 6073 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
NFKB1P19838 CFHR4-204ENST00000608469 1601 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
NFKB1P19838 GUCY1B2-203ENST00000493639 2871 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
NFKB1P19838 LPAR1-205ENST00000541779 2490 ntAPPRIS ALT1 TSL 1 (best) BASIC7.17□□□□□ -1.26
NFKB1P19838 SNTN-203ENST00000496807 3746 ntTSL 4 BASIC7.17□□□□□ -1.26
NFKB1P19838 SPTA1-201ENST00000368147 7999 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
NFKB1P19838 OR5A1-201ENST00000302030 1051 ntAPPRIS P1 BASIC7.17□□□□□ -1.26
NFKB1P19838 CFHR1-201ENST00000320493 1271 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
NFKB1P19838 U3.14-201ENST00000365363 227 ntBASIC7.17□□□□□ -1.26
NFKB1P19838 SNORA70.5-201ENST00000365519 135 ntBASIC7.17□□□□□ -1.26
NFKB1P19838 RNU6-692P-201ENST00000384496 107 ntBASIC7.17□□□□□ -1.26
NFKB1P19838 RNU6-575P-201ENST00000411326 105 ntBASIC7.17□□□□□ -1.26
NFKB1P19838 AC016716.2-201ENST00000418621 486 ntTSL 3 BASIC7.17□□□□□ -1.26
NFKB1P19838 AL445989.1-202ENST00000418943 776 ntTSL 2 BASIC7.17□□□□□ -1.26
NFKB1P19838 OFD1P18Y-201ENST00000420889 959 ntBASIC7.17□□□□□ -1.26
NFKB1P19838 CD33-203ENST00000421133 1023 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
NFKB1P19838 AC008753.1-201ENST00000423096 284 ntBASIC7.17□□□□□ -1.26
NFKB1P19838 MIR181A2HG-201ENST00000429139 662 ntTSL 2 BASIC7.17□□□□□ -1.26
NFKB1P19838 AC242426.1-201ENST00000435270 960 ntBASIC7.17□□□□□ -1.26
NFKB1P19838 RPS25P9-201ENST00000435591 252 ntBASIC7.17□□□□□ -1.26
NFKB1P19838 YWHAZP2-201ENST00000440317 728 ntBASIC7.17□□□□□ -1.26
NFKB1P19838 HMGN1P32-201ENST00000441744 256 ntBASIC7.17□□□□□ -1.26
NFKB1P19838 AC007064.2-201ENST00000442403 500 ntTSL 5 BASIC7.17□□□□□ -1.26
NFKB1P19838 AL139350.1-201ENST00000448825 408 ntTSL 3 BASIC7.17□□□□□ -1.26
NFKB1P19838 PSPHP1-201ENST00000450062 261 ntBASIC7.17□□□□□ -1.26
NFKB1P19838 AC104849.1-201ENST00000462623 405 ntBASIC7.17□□□□□ -1.26
NFKB1P19838 AC091982.1-202ENST00000473923 343 ntBASIC7.17□□□□□ -1.26
NFKB1P19838 MYL6P4-201ENST00000477911 453 ntBASIC7.17□□□□□ -1.26
NFKB1P19838 MDM2-217ENST00000478070 692 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
NFKB1P19838 SETSIP-201ENST00000485873 879 ntAPPRIS ALT2 BASIC7.17□□□□□ -1.26
NFKB1P19838 AC124893.1-201ENST00000496247 545 ntTSL 5 BASIC7.17□□□□□ -1.26
NFKB1P19838 AC113383.1-205ENST00000502253 792 ntTSL 2 BASIC7.17□□□□□ -1.26
NFKB1P19838 NDUFA5P12-201ENST00000503796 343 ntBASIC7.17□□□□□ -1.26
NFKB1P19838 AC091133.4-201ENST00000511142 308 ntBASIC7.17□□□□□ -1.26
NFKB1P19838 AC008728.1-201ENST00000512730 691 ntTSL 2 BASIC7.17□□□□□ -1.26
NFKB1P19838 AC108037.1-201ENST00000514103 423 ntTSL 3 BASIC7.17□□□□□ -1.26
NFKB1P19838 C14orf159-213ENST00000519019 834 ntTSL 3 BASIC7.17□□□□□ -1.26
NFKB1P19838 OXR1-212ENST00000521592 993 ntTSL 5 BASIC7.17□□□□□ -1.26
NFKB1P19838 AL353699.1-201ENST00000529078 365 ntTSL 3 BASIC7.17□□□□□ -1.26
NFKB1P19838 AL133166.1-205ENST00000548306 569 ntTSL 4 BASIC7.17□□□□□ -1.26
NFKB1P19838 TEX49-202ENST00000548380 573 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
NFKB1P19838 CR383656.6-201ENST00000550518 394 ntBASIC7.17□□□□□ -1.26
NFKB1P19838 AC013356.3-201ENST00000558601 584 ntTSL 3 BASIC7.17□□□□□ -1.26
NFKB1P19838 AC006441.1-201ENST00000581083 437 ntTSL 5 BASIC7.17□□□□□ -1.26
NFKB1P19838 AC005304.3-201ENST00000581533 511 ntTSL 3 BASIC7.17□□□□□ -1.26
NFKB1P19838 AL157938.2-202ENST00000588378 875 ntTSL 5 BASIC7.17□□□□□ -1.26
NFKB1P19838 AC011477.2-201ENST00000590697 921 ntTSL 2 BASIC7.17□□□□□ -1.26
NFKB1P19838 ZNF397-211ENST00000592264 1104 ntTSL 3 BASIC7.17□□□□□ -1.26
NFKB1P19838 ATXN3-251ENST00000617719 1074 ntTSL 5 BASIC7.17□□□□□ -1.26
NFKB1P19838 pRNA.9-201ENST00000618609 89 ntBASIC7.17□□□□□ -1.26
NFKB1P19838 AC012409.2-201ENST00000619812 751 ntTSL 5 BASIC7.17□□□□□ -1.26
NFKB1P19838 AC138649.3-201ENST00000622154 254 ntBASIC7.17□□□□□ -1.26
NFKB1P19838 OR8K3-202ENST00000623845 939 ntAPPRIS P1 BASIC7.17□□□□□ -1.26
NFKB1P19838 AC011815.3-201ENST00000624194 473 ntBASIC7.17□□□□□ -1.26
NFKB1P19838 AC215522.3-201ENST00000635602 354 ntTSL 5 BASIC7.17□□□□□ -1.26
NFKB1P19838 JAML-213ENST00000640745 951 ntTSL 5 BASIC7.17□□□□□ -1.26
NFKB1P19838 OR52B5P-202ENST00000641118 1110 ntBASIC7.17□□□□□ -1.26
NFKB1P19838 DDX58-202ENST00000379883 4353 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
NFKB1P19838 THSD7B-202ENST00000409968 6111 ntAPPRIS P2 TSL 5 BASIC7.17□□□□□ -1.26
NFKB1P19838 LINC01677-204ENST00000635342 1329 ntTSL 5 BASIC7.17□□□□□ -1.26
NFKB1P19838 GARNL3-205ENST00000435213 3599 ntTSL 2 BASIC7.17□□□□□ -1.26
NFKB1P19838 SLAMF1-202ENST00000302035 4006 ntAPPRIS P3 TSL 1 (best) BASIC7.17□□□□□ -1.26
NFKB1P19838 SLC25A40-201ENST00000341119 4045 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
NFKB1P19838 FDFT1-222ENST00000538689 2289 ntTSL 2 BASIC7.17□□□□□ -1.26
NFKB1P19838 PSG6-202ENST00000292125 1391 ntAPPRIS P3 TSL 1 (best) BASIC7.17□□□□□ -1.26
NFKB1P19838 EEF1A1P9-201ENST00000514975 1383 ntBASIC7.17□□□□□ -1.26
NFKB1P19838 CSDE1-201ENST00000261443 3228 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
NFKB1P19838 AP000688.2-201ENST00000422473 2336 ntTSL 2 BASIC7.17□□□□□ -1.26
NFKB1P19838 KCNH7-205ENST00000621889 1893 ntTSL 5 BASIC7.17□□□□□ -1.26
NFKB1P19838 AC022075.1-201ENST00000500682 2830 ntTSL 2 BASIC7.17□□□□□ -1.26
NFKB1P19838 SYTL5-201ENST00000297875 4722 ntTSL 5 BASIC7.17□□□□□ -1.26
NFKB1P19838 AC092111.2-201ENST00000611627 1414 ntBASIC7.17□□□□□ -1.26
NFKB1P19838 RNF213-220ENST00000582970 21055 ntAPPRIS P2 TSL 1 (best) BASIC7.17□□□□□ -1.26
NFKB1P19838 TMCO5A-205ENST00000559502 1939 ntAPPRIS ALT2 TSL 2 BASIC7.17□□□□□ -1.26
NFKB1P19838 LAMB4-201ENST00000205386 5857 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
NFKB1P19838 ACKR2-201ENST00000422265 2956 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
NFKB1P19838 PLD5-203ENST00000427495 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC7.17□□□□□ -1.26
NFKB1P19838 PPP2R5C-205ENST00000445439 1526 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
NFKB1P19838 MANSC1-204ENST00000545735 1501 ntTSL 2 BASIC7.17□□□□□ -1.26
NFKB1P19838 AC092646.2-201ENST00000431242 2095 ntBASIC7.16□□□□□ -1.26
NFKB1P19838 FGA-201ENST00000302053 3678 ntAPPRIS P1 TSL 2 BASIC7.16□□□□□ -1.26
NFKB1P19838 AC104837.1-201ENST00000444644 1587 ntBASIC7.16□□□□□ -1.26
NFKB1P19838 PDE11A-203ENST00000409504 2102 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
NFKB1P19838 ITGA1-201ENST00000282588 10757 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
NFKB1P19838 LGSN-204ENST00000622415 1612 ntTSL 2 BASIC7.16□□□□□ -1.26
NFKB1P19838 MED31-201ENST00000225728 1654 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
NFKB1P19838 SGO1-AS1-205ENST00000634837 1677 ntTSL 5 BASIC7.16□□□□□ -1.26
NFKB1P19838 TMEM269-204ENST00000637012 3354 ntAPPRIS ALT2 TSL 5 BASIC7.16□□□□□ -1.26
NFKB1P19838 ZNF83-205ENST00000594682 2890 ntTSL 4 BASIC7.16□□□□□ -1.26
NFKB1P19838 INTS2-202ENST00000444766 5878 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
NFKB1P19838 AC007993.1-201ENST00000621298 2430 ntBASIC7.16□□□□□ -1.26
NFKB1P19838 TEX14-203ENST00000389934 4927 ntAPPRIS P4 TSL 1 (best) BASIC7.16□□□□□ -1.26
NFKB1P19838 FBXO7-202ENST00000397426 1888 ntTSL 2 BASIC7.16□□□□□ -1.26
NFKB1P19838 LRRC31-202ENST00000316428 2520 ntAPPRIS P3 TSL 1 (best) BASIC7.16□□□□□ -1.26
NFKB1P19838 AC103591.2-201ENST00000265259 766 ntBASIC7.16□□□□□ -1.26
NFKB1P19838 OR5T2-201ENST00000313264 1248 ntAPPRIS P2 BASIC7.16□□□□□ -1.26
NFKB1P19838 RNU6-374P-201ENST00000364146 108 ntBASIC7.16□□□□□ -1.26
Retrieved 100 of 98,524 protein–RNA pairs in 76.8 ms