Protein–RNA interactions for Protein: P16410

CTLA4, Cytotoxic T-lymphocyte protein 4, humanhuman

Predictions only

Length 223 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTLA4P16410 OR4G1P-202ENST00000641173 1788 ntBASIC4.7□□□□□ -1.66
CTLA4P16410 SDR42E1-201ENST00000328945 11566 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
CTLA4P16410 LINC01091-203ENST00000514823 5262 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
CTLA4P16410 TCF4-290ENST00000638154 7801 ntAPPRIS ALT1 TSL 5 BASIC4.7□□□□□ -1.66
CTLA4P16410 LINC01013-205ENST00000458028 1345 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
CTLA4P16410 LRRC19-201ENST00000380055 3609 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
CTLA4P16410 MBNL1-203ENST00000324196 5225 ntTSL 5 BASIC4.69□□□□□ -1.66
CTLA4P16410 MYBPC1-205ENST00000536007 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC4.69□□□□□ -1.66
CTLA4P16410 MYBPC1-206ENST00000541119 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC4.69□□□□□ -1.66
CTLA4P16410 ICE2P1-201ENST00000512800 1849 ntBASIC4.69□□□□□ -1.66
CTLA4P16410 AC112198.2-201ENST00000426589 6996 ntBASIC4.69□□□□□ -1.66
CTLA4P16410 GTDC1-220ENST00000618778 2317 ntTSL 5 BASIC4.69□□□□□ -1.66
CTLA4P16410 KLHL5-202ENST00000261426 3300 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
CTLA4P16410 AC004158.1-201ENST00000564508 4319 ntBASIC4.69□□□□□ -1.66
CTLA4P16410 RXFP1-206ENST00000460056 2735 ntTSL 2 BASIC4.69□□□□□ -1.66
CTLA4P16410 TRIM51GP-201ENST00000534741 1350 ntBASIC4.69□□□□□ -1.66
CTLA4P16410 IL31RA-204ENST00000396834 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC4.69□□□□□ -1.66
CTLA4P16410 LINC01620-202ENST00000372910 649 ntTSL 5 BASIC4.69□□□□□ -1.66
CTLA4P16410 EFCAB9-201ENST00000398186 702 ntAPPRIS P1 TSL 3 BASIC4.69□□□□□ -1.66
CTLA4P16410 AL391422.1-201ENST00000402155 436 ntBASIC4.69□□□□□ -1.66
CTLA4P16410 CDY17P-201ENST00000414121 1282 ntBASIC4.69□□□□□ -1.66
CTLA4P16410 COX5BP7-201ENST00000414780 274 ntBASIC4.69□□□□□ -1.66
CTLA4P16410 LINC02518-201ENST00000421737 524 ntTSL 3 BASIC4.69□□□□□ -1.66
CTLA4P16410 NAP1L4P2-201ENST00000425958 899 ntBASIC4.69□□□□□ -1.66
CTLA4P16410 DSTNP5-201ENST00000427921 523 ntBASIC4.69□□□□□ -1.66
CTLA4P16410 RPS27AP2-201ENST00000457576 465 ntBASIC4.69□□□□□ -1.66
CTLA4P16410 AC108161.1-201ENST00000461060 402 ntBASIC4.69□□□□□ -1.66
CTLA4P16410 NCK1-AS1-201ENST00000461864 1194 ntTSL 2 BASIC4.69□□□□□ -1.66
CTLA4P16410 DEFB109A-201ENST00000482450 265 ntBASIC4.69□□□□□ -1.66
CTLA4P16410 PPIAP19-201ENST00000486414 492 ntBASIC4.69□□□□□ -1.66
CTLA4P16410 SLC9A9-AS2-201ENST00000490153 327 ntTSL 5 BASIC4.69□□□□□ -1.66
CTLA4P16410 AL049874.2-201ENST00000492636 288 ntBASIC4.69□□□□□ -1.66
CTLA4P16410 CRNDE-201ENST00000501177 614 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
CTLA4P16410 AC007370.1-201ENST00000503163 316 ntTSL 2 BASIC4.69□□□□□ -1.66
CTLA4P16410 LINC02217-201ENST00000505844 687 ntTSL 2 BASIC4.69□□□□□ -1.66
CTLA4P16410 AC090568.1-201ENST00000509499 856 ntBASIC4.69□□□□□ -1.66
CTLA4P16410 AC011389.1-203ENST00000513790 573 ntTSL 4 BASIC4.69□□□□□ -1.66
CTLA4P16410 RNA5SP230-201ENST00000517039 122 ntBASIC4.69□□□□□ -1.66
CTLA4P16410 TMEM97P2-201ENST00000517841 403 ntBASIC4.69□□□□□ -1.66
CTLA4P16410 AC025524.2-206ENST00000517953 439 ntTSL 3 BASIC4.69□□□□□ -1.66
CTLA4P16410 AP003501.1-201ENST00000524453 744 ntTSL 3 BASIC4.69□□□□□ -1.66
CTLA4P16410 HMGB1P40-201ENST00000525121 540 ntBASIC4.69□□□□□ -1.66
CTLA4P16410 AC079907.2-202ENST00000547004 423 ntTSL 2 BASIC4.69□□□□□ -1.66
CTLA4P16410 AC022404.1-201ENST00000555320 273 ntBASIC4.69□□□□□ -1.66
CTLA4P16410 AC079414.1-201ENST00000563114 488 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
CTLA4P16410 AC022884.2-201ENST00000578535 580 ntBASIC4.69□□□□□ -1.66
CTLA4P16410 ARL2BPP3-202ENST00000580773 420 ntTSL 5 BASIC4.69□□□□□ -1.66
CTLA4P16410 MIR3614-201ENST00000581261 86 ntBASIC4.69□□□□□ -1.66
CTLA4P16410 AC009597.2-201ENST00000604659 592 ntBASIC4.69□□□□□ -1.66
CTLA4P16410 AL034374.2-201ENST00000605281 548 ntBASIC4.69□□□□□ -1.66
CTLA4P16410 Z98949.1-220ENST00000609809 804 ntTSL 5 BASIC4.69□□□□□ -1.66
CTLA4P16410 MIR8080-201ENST00000622224 89 ntBASIC4.69□□□□□ -1.66
CTLA4P16410 MYOCOS-202ENST00000636788 1039 ntAPPRIS ALT2 TSL 5 BASIC4.69□□□□□ -1.66
CTLA4P16410 ADAM5-202ENST00000399789 1942 ntBASIC4.69□□□□□ -1.66
CTLA4P16410 SERPINB7-207ENST00000546027 1951 ntAPPRIS P1 TSL 2 BASIC4.69□□□□□ -1.66
CTLA4P16410 STK31-201ENST00000354639 3596 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
CTLA4P16410 CDC42SE2-201ENST00000360515 3591 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
CTLA4P16410 OR1E1-201ENST00000322608 1307 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
CTLA4P16410 ALB-209ENST00000503124 1741 ntTSL 5 BASIC4.69□□□□□ -1.66
CTLA4P16410 PALMD-201ENST00000263174 2510 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
CTLA4P16410 MECOM-201ENST00000264674 4900 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
CTLA4P16410 C5-201ENST00000223642 5465 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
CTLA4P16410 A1CF-205ENST00000374001 9221 ntAPPRIS ALT1 TSL 5 BASIC4.69□□□□□ -1.66
CTLA4P16410 AC011604.2-201ENST00000381541 2268 ntAPPRIS ALT2 TSL 2 BASIC4.69□□□□□ -1.66
CTLA4P16410 LINC01179-201ENST00000507838 2163 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
CTLA4P16410 SMG1P7-201ENST00000565246 2704 ntBASIC4.68□□□□□ -1.66
CTLA4P16410 B3GALT2-201ENST00000367434 3274 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
CTLA4P16410 CEP162-207ENST00000617909 5095 ntTSL 5 BASIC4.68□□□□□ -1.66
CTLA4P16410 OR4K1-203ENST00000641429 1358 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
CTLA4P16410 VPS41-203ENST00000395969 3181 ntTSL 5 BASIC4.68□□□□□ -1.66
CTLA4P16410 MIPOL1-204ENST00000539062 2389 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
CTLA4P16410 AL138820.1-201ENST00000617901 5305 ntBASIC4.68□□□□□ -1.66
CTLA4P16410 EIF3M-208ENST00000531120 5051 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
CTLA4P16410 ANAPC10-201ENST00000309439 868 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
CTLA4P16410 AC005294.1-201ENST00000355509 281 ntBASIC4.68□□□□□ -1.66
CTLA4P16410 RNU1-146P-201ENST00000364015 165 ntBASIC4.68□□□□□ -1.66
CTLA4P16410 OR2W1-201ENST00000377175 1028 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
CTLA4P16410 OOSP1-201ENST00000398992 1270 ntBASIC4.68□□□□□ -1.66
CTLA4P16410 OR5K2-201ENST00000427338 1060 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
CTLA4P16410 AL049749.1-201ENST00000430281 632 ntTSL 2 BASIC4.68□□□□□ -1.66
CTLA4P16410 CLUHP1-201ENST00000435012 1190 ntBASIC4.68□□□□□ -1.66
CTLA4P16410 AC008269.1-201ENST00000438070 646 ntTSL 3 BASIC4.68□□□□□ -1.66
CTLA4P16410 VAV3-AS1-201ENST00000438318 619 ntTSL 2 BASIC4.68□□□□□ -1.66
CTLA4P16410 AC013733.1-201ENST00000449835 985 ntTSL 4 BASIC4.68□□□□□ -1.66
CTLA4P16410 KCNMB2-AS1-205ENST00000451742 844 ntTSL 4 BASIC4.68□□□□□ -1.66
CTLA4P16410 DNAJB5P1-201ENST00000454004 806 ntBASIC4.68□□□□□ -1.66
CTLA4P16410 LINC01780-202ENST00000457683 391 ntTSL 3 BASIC4.68□□□□□ -1.66
CTLA4P16410 RN7SL273P-201ENST00000481561 299 ntBASIC4.68□□□□□ -1.66
CTLA4P16410 RN7SL466P-201ENST00000497546 295 ntBASIC4.68□□□□□ -1.66
CTLA4P16410 RPEP1-201ENST00000504507 658 ntBASIC4.68□□□□□ -1.66
CTLA4P16410 AZIN1-AS1-203ENST00000517996 756 ntTSL 3 BASIC4.68□□□□□ -1.66
CTLA4P16410 MSC-AS1-205ENST00000519068 569 ntTSL 3 BASIC4.68□□□□□ -1.66
CTLA4P16410 OR7G1-201ENST00000541538 936 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
CTLA4P16410 AC131532.1-201ENST00000555596 519 ntTSL 4 BASIC4.68□□□□□ -1.66
CTLA4P16410 AC019322.1-201ENST00000571869 389 ntBASIC4.68□□□□□ -1.66
CTLA4P16410 AC103808.4-201ENST00000577258 391 ntTSL 3 BASIC4.68□□□□□ -1.66
CTLA4P16410 AC011824.2-202ENST00000578602 533 ntTSL 4 BASIC4.68□□□□□ -1.66
CTLA4P16410 RN7SL708P-201ENST00000580952 299 ntBASIC4.68□□□□□ -1.66
CTLA4P16410 MIR4660-201ENST00000583549 74 ntBASIC4.68□□□□□ -1.66
CTLA4P16410 TTN-AS1-219ENST00000586707 834 ntTSL 5 BASIC4.68□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 148.2 ms