Protein–RNA interactions for Protein: P12110

COL6A2, Collagen alpha-2(VI) chain, humanhuman

Predictions only

Length 1,019 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2P12110 PLSCR2-206ENST00000610787 1001 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
COL6A2P12110 AL133243.1-201ENST00000614487 366 ntBASIC6.35□□□□□ -1.39
COL6A2P12110 MIR6085-201ENST00000618314 110 ntBASIC6.35□□□□□ -1.39
COL6A2P12110 RNASE11-211ENST00000620912 883 ntAPPRIS P2 TSL 1 (best) BASIC6.35□□□□□ -1.39
COL6A2P12110 MYPN-204ENST00000540630 5707 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
COL6A2P12110 MBNL2-202ENST00000345429 4669 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
COL6A2P12110 LINC01625-201ENST00000454788 1690 ntTSL 2 BASIC6.35□□□□□ -1.39
COL6A2P12110 MAPK9-213ENST00000539014 1668 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
COL6A2P12110 ARCN1-202ENST00000359415 4038 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
COL6A2P12110 GCSAML-201ENST00000366488 3820 ntAPPRIS P3 TSL 1 (best) BASIC6.35□□□□□ -1.39
COL6A2P12110 KIF20A-205ENST00000508792 2935 ntTSL 2 BASIC6.35□□□□□ -1.39
COL6A2P12110 SLC26A3-201ENST00000340010 2863 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
COL6A2P12110 GTDC1-203ENST00000392867 2408 ntTSL 5 BASIC6.35□□□□□ -1.39
COL6A2P12110 ANGPT1-205ENST00000520052 1523 ntTSL 5 BASIC6.35□□□□□ -1.39
COL6A2P12110 RGSL1-201ENST00000294854 3696 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
COL6A2P12110 NAP1L1-227ENST00000618691 13505 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
COL6A2P12110 LIPF-203ENST00000394375 1470 ntTSL 2 BASIC6.34□□□□□ -1.39
COL6A2P12110 ZNF639-210ENST00000621687 1458 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
COL6A2P12110 EPS8-209ENST00000542903 1858 ntTSL 2 BASIC6.34□□□□□ -1.39
COL6A2P12110 THRB-203ENST00000396671 7506 ntAPPRIS P2 TSL 5 BASIC6.34□□□□□ -1.39
COL6A2P12110 ZNF532-201ENST00000336078 6696 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
COL6A2P12110 ZNF813-201ENST00000396403 6151 ntAPPRIS P1 TSL 3 BASIC6.34□□□□□ -1.39
COL6A2P12110 TOR1AIP1-202ENST00000435319 3397 ntAPPRIS ALT2 TSL 1 (best) BASIC6.34□□□□□ -1.39
COL6A2P12110 CHD6-202ENST00000373222 2477 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
COL6A2P12110 ERG-202ENST00000398897 4651 ntTSL 5 BASIC6.34□□□□□ -1.39
COL6A2P12110 FYB1-204ENST00000505428 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC6.34□□□□□ -1.39
COL6A2P12110 STK3-216ENST00000523601 3107 ntTSL 2 BASIC6.34□□□□□ -1.39
COL6A2P12110 RPL39P5-201ENST00000273411 449 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
COL6A2P12110 MT1A-201ENST00000290705 396 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
COL6A2P12110 OR4S2-201ENST00000312422 936 ntAPPRIS P1 BASIC6.34□□□□□ -1.39
COL6A2P12110 Y_RNA.77-201ENST00000362962 107 ntBASIC6.34□□□□□ -1.39
COL6A2P12110 RNA5SP27-201ENST00000363839 119 ntBASIC6.34□□□□□ -1.39
COL6A2P12110 RN7SKP191-201ENST00000364713 306 ntBASIC6.34□□□□□ -1.39
COL6A2P12110 NUDT19P3-201ENST00000404698 555 ntBASIC6.34□□□□□ -1.39
COL6A2P12110 RANP6-201ENST00000413691 644 ntBASIC6.34□□□□□ -1.39
COL6A2P12110 MRPS21P5-201ENST00000417885 231 ntBASIC6.34□□□□□ -1.39
COL6A2P12110 AC107057.1-201ENST00000425763 319 ntTSL 3 BASIC6.34□□□□□ -1.39
COL6A2P12110 AC234781.2-201ENST00000426370 994 ntBASIC6.34□□□□□ -1.39
COL6A2P12110 RAC1P8-201ENST00000427086 527 ntBASIC6.34□□□□□ -1.39
COL6A2P12110 AL354977.2-201ENST00000430387 728 ntTSL 3 BASIC6.34□□□□□ -1.39
COL6A2P12110 MTND1P32-201ENST00000433043 938 ntBASIC6.34□□□□□ -1.39
COL6A2P12110 AC098826.1-201ENST00000433943 471 ntBASIC6.34□□□□□ -1.39
COL6A2P12110 RPL3P11-201ENST00000434028 1146 ntBASIC6.34□□□□□ -1.39
COL6A2P12110 EMC3-AS1-205ENST00000438698 534 ntBASIC6.34□□□□□ -1.39
COL6A2P12110 DNAJC19P5-201ENST00000443295 316 ntBASIC6.34□□□□□ -1.39
COL6A2P12110 AC007327.1-201ENST00000447461 264 ntBASIC6.34□□□□□ -1.39
COL6A2P12110 AC009961.3-201ENST00000449832 765 ntBASIC6.34□□□□□ -1.39
COL6A2P12110 AC136489.1-203ENST00000450246 736 ntTSL 5 BASIC6.34□□□□□ -1.39
COL6A2P12110 PHKA2-AS1-202ENST00000452900 656 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
COL6A2P12110 TNS3-209ENST00000458317 1156 ntTSL 5 BASIC6.34□□□□□ -1.39
COL6A2P12110 AC004692.2-203ENST00000458590 497 ntTSL 4 BASIC6.34□□□□□ -1.39
COL6A2P12110 EIF4A2P4-201ENST00000458691 1196 ntBASIC6.34□□□□□ -1.39
COL6A2P12110 RN7SL221P-201ENST00000466190 281 ntBASIC6.34□□□□□ -1.39
COL6A2P12110 AC093752.1-212ENST00000500559 453 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
COL6A2P12110 AC114940.1-201ENST00000512162 1265 ntBASIC6.34□□□□□ -1.39
COL6A2P12110 RN7SKP67-201ENST00000515905 235 ntBASIC6.34□□□□□ -1.39
COL6A2P12110 IGKV2-19-201ENST00000518132 283 ntBASIC6.34□□□□□ -1.39
COL6A2P12110 COX6C-205ENST00000520468 1098 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
COL6A2P12110 AC103831.1-201ENST00000522228 422 ntTSL 3 BASIC6.34□□□□□ -1.39
COL6A2P12110 AP003472.2-201ENST00000523554 639 ntTSL 3 BASIC6.34□□□□□ -1.39
COL6A2P12110 MTCO3P15-201ENST00000526563 574 ntBASIC6.34□□□□□ -1.39
COL6A2P12110 AL355075.1-201ENST00000528210 468 ntTSL 2 BASIC6.34□□□□□ -1.39
COL6A2P12110 AL137804.1-201ENST00000528872 576 ntTSL 3 BASIC6.34□□□□□ -1.39
COL6A2P12110 AP001972.1-201ENST00000529215 506 ntTSL 2 BASIC6.34□□□□□ -1.39
COL6A2P12110 C3orf14-207ENST00000542214 768 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
COL6A2P12110 AC068643.2-201ENST00000547418 852 ntTSL 5 BASIC6.34□□□□□ -1.39
COL6A2P12110 MYL2-203ENST00000548438 664 ntTSL 3 BASIC6.34□□□□□ -1.39
COL6A2P12110 AC023161.2-201ENST00000551218 780 ntBASIC6.34□□□□□ -1.39
COL6A2P12110 APAF1-211ENST00000552268 1143 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
COL6A2P12110 AC023310.2-201ENST00000553844 547 ntBASIC6.34□□□□□ -1.39
COL6A2P12110 AL356022.1-202ENST00000555433 379 ntTSL 2 BASIC6.34□□□□□ -1.39
COL6A2P12110 AL049869.2-201ENST00000556634 365 ntTSL 2 BASIC6.34□□□□□ -1.39
COL6A2P12110 AL096869.1-201ENST00000557622 559 ntTSL 4 BASIC6.34□□□□□ -1.39
COL6A2P12110 USP3-AS1-202ENST00000559357 455 ntTSL 2 BASIC6.34□□□□□ -1.39
COL6A2P12110 HNRNPA1P74-201ENST00000560782 835 ntBASIC6.34□□□□□ -1.39
COL6A2P12110 AC009120.3-201ENST00000563335 499 ntBASIC6.34□□□□□ -1.39
COL6A2P12110 AC012146.1-201ENST00000571138 462 ntTSL 2 BASIC6.34□□□□□ -1.39
COL6A2P12110 MIR7515HG-250ENST00000592565 856 ntTSL 5 BASIC6.34□□□□□ -1.39
COL6A2P12110 AC097467.3-208ENST00000593486 670 ntTSL 5 BASIC6.34□□□□□ -1.39
COL6A2P12110 AL512430.4-201ENST00000603085 613 ntBASIC6.34□□□□□ -1.39
COL6A2P12110 AC080078.2-201ENST00000603766 501 ntBASIC6.34□□□□□ -1.39
COL6A2P12110 SNORD96A-201ENST00000606577 79 ntBASIC6.34□□□□□ -1.39
COL6A2P12110 AC244196.4-201ENST00000611787 392 ntAPPRIS P1 BASIC6.34□□□□□ -1.39
COL6A2P12110 AC015574.1-202ENST00000616588 456 ntTSL 5 BASIC6.34□□□□□ -1.39
COL6A2P12110 AC079906.1-201ENST00000621214 815 ntTSL 3 BASIC6.34□□□□□ -1.39
COL6A2P12110 AC006453.3-201ENST00000635891 377 ntBASIC6.34□□□□□ -1.39
COL6A2P12110 AC007878.1-201ENST00000434786 1615 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
COL6A2P12110 BEND2-201ENST00000380030 1938 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
COL6A2P12110 METTL6-203ENST00000443029 4020 ntAPPRIS P1 TSL 5 BASIC6.34□□□□□ -1.39
COL6A2P12110 GYPA-212ENST00000616983 2538 ntAPPRIS ALT2 TSL 5 BASIC6.34□□□□□ -1.39
COL6A2P12110 NLGN1-202ENST00000401917 1827 ntTSL 5 BASIC6.34□□□□□ -1.4
COL6A2P12110 TPTE2P2-202ENST00000605924 2113 ntTSL 5 BASIC6.34□□□□□ -1.4
COL6A2P12110 AC087516.1-201ENST00000561236 2428 ntBASIC6.34□□□□□ -1.4
COL6A2P12110 NALCN-201ENST00000251127 6818 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
COL6A2P12110 AC005702.3-201ENST00000585345 1447 ntBASIC6.33□□□□□ -1.4
COL6A2P12110 GTF3C3-202ENST00000409364 1736 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
COL6A2P12110 RPL23AP82-206ENST00000480246 2987 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
COL6A2P12110 AC111188.2-201ENST00000529697 1387 ntBASIC6.33□□□□□ -1.4
COL6A2P12110 CDK1-202ENST00000373809 1613 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
COL6A2P12110 AC117409.1-201ENST00000470499 1310 ntBASIC6.33□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 89.7 ms