Protein–RNA interactions for Protein: P09493

TPM1, Tropomyosin alpha-1 chain, humanhuman

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1P09493 SNORA70.20-201ENST00000516848 126 ntBASIC5.91□□□□□ -1.46
TPM1P09493 OR8G3P-201ENST00000533406 921 ntBASIC5.91□□□□□ -1.46
TPM1P09493 BTG1P1-201ENST00000540396 508 ntBASIC5.91□□□□□ -1.46
TPM1P09493 AC079905.1-201ENST00000549280 475 ntBASIC5.91□□□□□ -1.46
TPM1P09493 LINC02327-205ENST00000550990 472 ntTSL 3 BASIC5.91□□□□□ -1.46
TPM1P09493 OR11H3P-201ENST00000554547 982 ntBASIC5.91□□□□□ -1.46
TPM1P09493 AL845552.1-201ENST00000556820 323 ntBASIC5.91□□□□□ -1.46
TPM1P09493 USP3-AS1-202ENST00000559357 455 ntTSL 2 BASIC5.91□□□□□ -1.46
TPM1P09493 AC005479.3-201ENST00000602790 431 ntBASIC5.91□□□□□ -1.46
TPM1P09493 AL451049.1-201ENST00000608672 497 ntBASIC5.91□□□□□ -1.46
TPM1P09493 AC244196.4-201ENST00000611787 392 ntAPPRIS P1 BASIC5.91□□□□□ -1.46
TPM1P09493 AP005431.1-201ENST00000618479 319 ntBASIC5.91□□□□□ -1.46
TPM1P09493 AC135068.5-201ENST00000624197 983 ntBASIC5.91□□□□□ -1.46
TPM1P09493 AC099654.6-201ENST00000636487 512 ntBASIC5.91□□□□□ -1.46
TPM1P09493 RASSF6-204ENST00000395777 2735 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
TPM1P09493 XIST-204ENST00000429829 19275 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
TPM1P09493 CLUL1-213ENST00000620089 1947 ntTSL 5 BASIC5.91□□□□□ -1.46
TPM1P09493 ANXA1-202ENST00000376911 2209 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
TPM1P09493 NEPNP-201ENST00000404786 1371 ntBASIC5.91□□□□□ -1.46
TPM1P09493 SULT1C2-205ENST00000437390 1359 ntTSL 2 BASIC5.91□□□□□ -1.46
TPM1P09493 B3GALT2-201ENST00000367434 3274 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
TPM1P09493 ATPAF1-212ENST00000542495 1779 ntTSL 2 BASIC5.9□□□□□ -1.46
TPM1P09493 RGS4-202ENST00000367908 2606 ntTSL 2 BASIC5.9□□□□□ -1.46
TPM1P09493 MYO3A-202ENST00000376301 727 ntTSL 5 BASIC5.9□□□□□ -1.46
TPM1P09493 OR7E101P-201ENST00000400428 513 ntBASIC5.9□□□□□ -1.46
TPM1P09493 RPL10P10-201ENST00000403509 664 ntBASIC5.9□□□□□ -1.46
TPM1P09493 MIR1203-201ENST00000408812 85 ntBASIC5.9□□□□□ -1.46
TPM1P09493 HAO2-IT1-201ENST00000419144 311 ntTSL 5 BASIC5.9□□□□□ -1.46
TPM1P09493 FAM183DP-201ENST00000421987 399 ntBASIC5.9□□□□□ -1.46
TPM1P09493 AC113412.1-201ENST00000425840 504 ntBASIC5.9□□□□□ -1.46
TPM1P09493 NAP1L4P3-201ENST00000432820 1147 ntBASIC5.9□□□□□ -1.46
TPM1P09493 TBX18-AS1-202ENST00000441863 382 ntTSL 2 BASIC5.9□□□□□ -1.46
TPM1P09493 PCBP1-AS1-232ENST00000442040 1111 ntTSL 3 BASIC5.9□□□□□ -1.46
TPM1P09493 AC004870.2-201ENST00000445615 831 ntTSL 3 BASIC5.9□□□□□ -1.46
TPM1P09493 AL356421.2-201ENST00000446733 197 ntTSL 3 BASIC5.9□□□□□ -1.46
TPM1P09493 LINC01422-203ENST00000447149 509 ntTSL 4 BASIC5.9□□□□□ -1.46
TPM1P09493 AC016746.1-201ENST00000489557 831 ntTSL 2 BASIC5.9□□□□□ -1.46
TPM1P09493 HMMR-AS1-202ENST00000521666 800 ntTSL 2 BASIC5.9□□□□□ -1.46
TPM1P09493 AL133481.2-201ENST00000538322 367 ntTSL 2 BASIC5.9□□□□□ -1.46
TPM1P09493 BNIP3P1-201ENST00000547295 580 ntBASIC5.9□□□□□ -1.46
TPM1P09493 IGBP1P1-201ENST00000554337 1009 ntBASIC5.9□□□□□ -1.46
TPM1P09493 RN7SL435P-201ENST00000584418 282 ntBASIC5.9□□□□□ -1.46
TPM1P09493 AC097467.3-209ENST00000595760 615 ntTSL 5 BASIC5.9□□□□□ -1.46
TPM1P09493 RMDN2-AS1-203ENST00000601029 613 ntTSL 5 BASIC5.9□□□□□ -1.46
TPM1P09493 AP000769.2-201ENST00000602344 396 ntBASIC5.9□□□□□ -1.46
TPM1P09493 AL122125.1-201ENST00000616999 600 ntBASIC5.9□□□□□ -1.46
TPM1P09493 LINC01963-201ENST00000562038 3148 ntBASIC5.9□□□□□ -1.46
TPM1P09493 LINC00919-201ENST00000561513 1658 ntTSL 2 BASIC5.9□□□□□ -1.47
TPM1P09493 SLC4A10-203ENST00000415876 5578 ntTSL 1 (best) BASIC5.9□□□□□ -1.47
TPM1P09493 ZNF83-203ENST00000541777 3743 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
TPM1P09493 NUDT12-202ENST00000507423 1781 ntTSL 2 BASIC5.9□□□□□ -1.47
TPM1P09493 AP002001.1-201ENST00000526101 1759 ntTSL 1 (best) BASIC5.9□□□□□ -1.47
TPM1P09493 AC100778.3-201ENST00000580060 1750 ntBASIC5.9□□□□□ -1.47
TPM1P09493 SEC31A-201ENST00000264405 3447 ntTSL 2 BASIC5.9□□□□□ -1.47
TPM1P09493 ZNF181-203ENST00000459757 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC5.9□□□□□ -1.47
TPM1P09493 RANBP3L-201ENST00000296604 3104 ntAPPRIS P3 TSL 1 (best) BASIC5.9□□□□□ -1.47
TPM1P09493 CNTRL-205ENST00000373850 5824 ntTSL 2 BASIC5.89□□□□□ -1.47
TPM1P09493 FUT9-201ENST00000302103 12783 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
TPM1P09493 RABL3-201ENST00000273375 3883 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
TPM1P09493 SCN11A-203ENST00000456224 5262 ntAPPRIS ALT2 TSL 5 BASIC5.89□□□□□ -1.47
TPM1P09493 FILIP1-202ENST00000370020 4051 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
TPM1P09493 SCN3A-202ENST00000360093 9123 ntAPPRIS ALT1 TSL 5 BASIC5.89□□□□□ -1.47
TPM1P09493 MRPL35-202ENST00000337109 3727 ntAPPRIS P4 TSL 1 (best) BASIC5.89□□□□□ -1.47
TPM1P09493 INPP4B-220ENST00000513000 8831 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
TPM1P09493 OR5P2-201ENST00000329434 1069 ntAPPRIS P1 BASIC5.89□□□□□ -1.47
TPM1P09493 TMSB4XP2-201ENST00000335179 210 ntBASIC5.89□□□□□ -1.47
TPM1P09493 IFNA10-201ENST00000357374 963 ntAPPRIS P1 BASIC5.89□□□□□ -1.47
TPM1P09493 RNA5SP273-201ENST00000362484 113 ntBASIC5.89□□□□□ -1.47
TPM1P09493 LEMD1-203ENST00000367152 741 ntTSL 2 BASIC5.89□□□□□ -1.47
TPM1P09493 TRAJ4-201ENST00000390533 63 ntAPPRIS P1 BASIC5.89□□□□□ -1.47
TPM1P09493 AC124944.2-201ENST00000429866 1242 ntBASIC5.89□□□□□ -1.47
TPM1P09493 LINC01828-201ENST00000445514 531 ntTSL 4 BASIC5.89□□□□□ -1.47
TPM1P09493 TIMM8BP2-201ENST00000445940 251 ntBASIC5.89□□□□□ -1.47
TPM1P09493 TAS2R39-201ENST00000446620 1017 ntAPPRIS P1 BASIC5.89□□□□□ -1.47
TPM1P09493 AL034380.1-201ENST00000448791 306 ntTSL 3 BASIC5.89□□□□□ -1.47
TPM1P09493 AL035443.1-201ENST00000456631 304 ntTSL 3 BASIC5.89□□□□□ -1.47
TPM1P09493 CREM-220ENST00000463314 964 ntTSL 2 BASIC5.89□□□□□ -1.47
TPM1P09493 AC092754.1-201ENST00000472975 479 ntBASIC5.89□□□□□ -1.47
TPM1P09493 ENSA-211ENST00000503345 793 ntTSL 3 BASIC5.89□□□□□ -1.47
TPM1P09493 AC112184.1-201ENST00000505179 312 ntBASIC5.89□□□□□ -1.47
TPM1P09493 AC021151.1-201ENST00000506933 183 ntTSL 3 BASIC5.89□□□□□ -1.47
TPM1P09493 MTND6P2-201ENST00000512226 524 ntBASIC5.89□□□□□ -1.47
TPM1P09493 OR5H7P-201ENST00000514084 930 ntBASIC5.89□□□□□ -1.47
TPM1P09493 AC027117.1-201ENST00000520646 667 ntTSL 5 BASIC5.89□□□□□ -1.47
TPM1P09493 MRPS16P1-201ENST00000523462 412 ntBASIC5.89□□□□□ -1.47
TPM1P09493 C5orf58-205ENST00000524171 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC5.89□□□□□ -1.47
TPM1P09493 AC103843.1-201ENST00000527318 682 ntTSL 4 BASIC5.89□□□□□ -1.47
TPM1P09493 TRDN-205ENST00000546248 1179 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
TPM1P09493 AC233702.9-201ENST00000581528 203 ntBASIC5.89□□□□□ -1.47
TPM1P09493 AC024563.1-201ENST00000601860 618 ntTSL 2 BASIC5.89□□□□□ -1.47
TPM1P09493 AC091769.2-201ENST00000605385 479 ntTSL 4 BASIC5.89□□□□□ -1.47
TPM1P09493 OR8G7P-201ENST00000616658 848 ntBASIC5.89□□□□□ -1.47
TPM1P09493 AL391425.1-202ENST00000617518 774 ntTSL 5 BASIC5.89□□□□□ -1.47
TPM1P09493 AP001962.1-201ENST00000624114 559 ntBASIC5.89□□□□□ -1.47
TPM1P09493 AP003400.3-201ENST00000624904 346 ntBASIC5.89□□□□□ -1.47
TPM1P09493 AC134980.1-214ENST00000638815 687 ntTSL 5 BASIC5.89□□□□□ -1.47
TPM1P09493 PLCH1-AS1-201ENST00000475196 1308 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
TPM1P09493 ZNF418-205ENST00000595830 3543 ntAPPRIS P3 TSL 1 (best) BASIC5.89□□□□□ -1.47
TPM1P09493 MARCH1-202ENST00000339875 2476 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
TPM1P09493 AC004817.4-201ENST00000602396 3625 ntBASIC5.89□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 71.1 ms