Protein–RNA interactions for Protein: P05538

HLA-DQB2, HLA class II histocompatibility antigen, DQ beta 2 chain, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2P05538 CFH-201ENST00000359637 1454 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
HLA-DQB2P05538 RALGAPA1P1-201ENST00000443361 6232 ntBASIC5.34□□□□□ -1.55
HLA-DQB2P05538 ITGAV-204ENST00000433736 3288 ntAPPRIS ALT2 TSL 2 BASIC5.34□□□□□ -1.55
HLA-DQB2P05538 RNF32-203ENST00000392741 2260 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
HLA-DQB2P05538 OR5AN1-203ENST00000641998 7647 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
HLA-DQB2P05538 MUC12-206ENST00000536621 16321 ntAPPRIS P2 TSL 5 BASIC5.34□□□□□ -1.55
HLA-DQB2P05538 SPATA4-201ENST00000280191 1169 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
HLA-DQB2P05538 LINC01317-201ENST00000366209 779 ntTSL 5 BASIC5.34□□□□□ -1.55
HLA-DQB2P05538 PRKACB-203ENST00000370684 869 ntTSL 5 BASIC5.34□□□□□ -1.55
HLA-DQB2P05538 OR51B6-201ENST00000380219 939 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
HLA-DQB2P05538 AC025946.1-201ENST00000413286 430 ntTSL 3 BASIC5.34□□□□□ -1.55
HLA-DQB2P05538 LINC01589-201ENST00000422971 548 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
HLA-DQB2P05538 AL359634.1-201ENST00000429807 1179 ntTSL 5 BASIC5.34□□□□□ -1.55
HLA-DQB2P05538 C21orf91-OT1-203ENST00000439392 497 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
HLA-DQB2P05538 KRTAP8-2P-201ENST00000440620 186 ntBASIC5.34□□□□□ -1.55
HLA-DQB2P05538 AC093801.1-201ENST00000504017 307 ntTSL 2 BASIC5.34□□□□□ -1.55
HLA-DQB2P05538 AC006427.1-201ENST00000514359 712 ntBASIC5.34□□□□□ -1.55
HLA-DQB2P05538 NSMCE2-210ENST00000522563 1037 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.55
HLA-DQB2P05538 AC018793.4-201ENST00000524542 585 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
HLA-DQB2P05538 AC027369.5-201ENST00000533838 755 ntBASIC5.34□□□□□ -1.55
HLA-DQB2P05538 ASB8-215ENST00000540782 659 ntTSL 3 BASIC5.34□□□□□ -1.55
HLA-DQB2P05538 KLRK1-204ENST00000540818 951 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
HLA-DQB2P05538 PCED1B-AS1-210ENST00000552975 378 ntTSL 2 BASIC5.34□□□□□ -1.55
HLA-DQB2P05538 LINC00687-203ENST00000558175 696 ntTSL 3 BASIC5.34□□□□□ -1.55
HLA-DQB2P05538 AC109460.2-201ENST00000569974 544 ntTSL 3 BASIC5.34□□□□□ -1.55
HLA-DQB2P05538 MTCYBP13-201ENST00000578634 1093 ntBASIC5.34□□□□□ -1.55
HLA-DQB2P05538 Z98949.1-202ENST00000600211 1282 ntTSL 5 BASIC5.34□□□□□ -1.55
HLA-DQB2P05538 AC022467.1-201ENST00000614738 749 ntBASIC5.34□□□□□ -1.55
HLA-DQB2P05538 MIR6729-201ENST00000618194 65 ntBASIC5.34□□□□□ -1.55
HLA-DQB2P05538 AC018793.1-201ENST00000638166 585 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
HLA-DQB2P05538 AC018793.2-201ENST00000639584 585 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
HLA-DQB2P05538 AC018793.3-201ENST00000640805 585 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
HLA-DQB2P05538 BPIFC-201ENST00000300399 1980 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
HLA-DQB2P05538 DST-205ENST00000370765 8999 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
HLA-DQB2P05538 GART-205ENST00000381839 3469 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
HLA-DQB2P05538 SFT2D2-201ENST00000271375 11040 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
HLA-DQB2P05538 AIMP1-202ENST00000394701 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC5.34□□□□□ -1.55
HLA-DQB2P05538 LYVE1-201ENST00000256178 3273 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
HLA-DQB2P05538 COL14A1-209ENST00000537875 3119 ntTSL 5 BASIC5.34□□□□□ -1.56
HLA-DQB2P05538 AL359538.1-201ENST00000453498 1710 ntTSL 1 (best) BASIC5.34□□□□□ -1.56
HLA-DQB2P05538 SRSF11-201ENST00000370949 3034 ntTSL 1 (best) BASIC5.34□□□□□ -1.56
HLA-DQB2P05538 ZNF571-201ENST00000328550 4113 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
HLA-DQB2P05538 CASP1-208ENST00000527979 1521 ntTSL 5 BASIC5.33□□□□□ -1.56
HLA-DQB2P05538 OAZ3-204ENST00000479764 3789 ntTSL 5 BASIC5.33□□□□□ -1.56
HLA-DQB2P05538 ADAMDEC1-204ENST00000522298 2044 ntAPPRIS ALT2 TSL 2 BASIC5.33□□□□□ -1.56
HLA-DQB2P05538 TRPM3-209ENST00000377110 12258 ntAPPRIS ALT1 TSL 1 (best) BASIC5.33□□□□□ -1.56
HLA-DQB2P05538 GABRG2-228ENST00000640985 3086 ntTSL 5 BASIC5.33□□□□□ -1.56
HLA-DQB2P05538 FAM26D-201ENST00000368596 1353 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
HLA-DQB2P05538 NPM1-202ENST00000351986 1237 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
HLA-DQB2P05538 AC005294.1-201ENST00000355509 281 ntBASIC5.33□□□□□ -1.56
HLA-DQB2P05538 U3.3-201ENST00000362986 216 ntBASIC5.33□□□□□ -1.56
HLA-DQB2P05538 RPL12P9-201ENST00000412942 488 ntBASIC5.33□□□□□ -1.56
HLA-DQB2P05538 LINC01740-201ENST00000423842 332 ntTSL 2 BASIC5.33□□□□□ -1.56
HLA-DQB2P05538 PQLC2L-202ENST00000426338 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC5.33□□□□□ -1.56
HLA-DQB2P05538 AL592431.1-201ENST00000451090 317 ntTSL 3 BASIC5.33□□□□□ -1.56
HLA-DQB2P05538 CBX1P2-201ENST00000453841 458 ntBASIC5.33□□□□□ -1.56
HLA-DQB2P05538 DNAJB5P1-201ENST00000454004 806 ntBASIC5.33□□□□□ -1.56
HLA-DQB2P05538 CR383656.1-201ENST00000484916 377 ntBASIC5.33□□□□□ -1.56
HLA-DQB2P05538 SLC9A9-AS2-201ENST00000490153 327 ntTSL 5 BASIC5.33□□□□□ -1.56
HLA-DQB2P05538 AC024558.1-201ENST00000505008 528 ntBASIC5.33□□□□□ -1.56
HLA-DQB2P05538 LINC01339-201ENST00000505712 440 ntTSL 2 BASIC5.33□□□□□ -1.56
HLA-DQB2P05538 ZCCHC10-210ENST00000513848 876 ntAPPRIS ALT2 TSL 2 BASIC5.33□□□□□ -1.56
HLA-DQB2P05538 AC002563.1-201ENST00000535109 451 ntTSL 3 BASIC5.33□□□□□ -1.56
HLA-DQB2P05538 AL049779.2-201ENST00000553847 315 ntBASIC5.33□□□□□ -1.56
HLA-DQB2P05538 PDCD6IPP2-207ENST00000566321 1069 ntBASIC5.33□□□□□ -1.56
HLA-DQB2P05538 MIR4489-201ENST00000578869 62 ntBASIC5.33□□□□□ -1.56
HLA-DQB2P05538 GMFG-202ENST00000594700 397 ntTSL 2 BASIC5.33□□□□□ -1.56
HLA-DQB2P05538 Z98949.1-220ENST00000609809 804 ntTSL 5 BASIC5.33□□□□□ -1.56
HLA-DQB2P05538 AL353770.4-201ENST00000614936 468 ntTSL 5 BASIC5.33□□□□□ -1.56
HLA-DQB2P05538 AL590491.2-203ENST00000614969 468 ntTSL 4 BASIC5.33□□□□□ -1.56
HLA-DQB2P05538 OR8S1-202ENST00000641651 939 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
HLA-DQB2P05538 SMNDC1-202ENST00000369603 4341 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
HLA-DQB2P05538 IFNG-AS1-202ENST00000538665 1791 ntTSL 2 BASIC5.33□□□□□ -1.56
HLA-DQB2P05538 DCDC1-203ENST00000406071 4758 ntAPPRIS P2 TSL 5 BASIC5.33□□□□□ -1.56
HLA-DQB2P05538 AC023632.6-201ENST00000624338 2177 ntBASIC5.33□□□□□ -1.56
HLA-DQB2P05538 TJP1-209ENST00000545208 5007 ntAPPRIS ALT2 TSL 5 BASIC5.33□□□□□ -1.56
HLA-DQB2P05538 CTAGE5-207ENST00000396165 3071 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
HLA-DQB2P05538 ZNF850-203ENST00000614887 7625 ntAPPRIS ALT2 TSL 1 (best) BASIC5.33□□□□□ -1.56
HLA-DQB2P05538 VPS13C-204ENST00000395898 11012 ntAPPRIS ALT2 TSL 1 (best) BASIC5.33□□□□□ -1.56
HLA-DQB2P05538 LGALS8-220ENST00000526634 1852 ntAPPRIS ALT2 TSL 5 BASIC5.32□□□□□ -1.56
HLA-DQB2P05538 MTX3-204ENST00000617335 6155 ntTSL 2 BASIC5.32□□□□□ -1.56
HLA-DQB2P05538 GRIK2-203ENST00000369134 4185 ntTSL 5 BASIC5.32□□□□□ -1.56
HLA-DQB2P05538 SGIP1-203ENST00000371037 7768 ntAPPRIS P3 TSL 1 (best) BASIC5.32□□□□□ -1.56
HLA-DQB2P05538 RN7SKP269-201ENST00000365545 319 ntBASIC5.32□□□□□ -1.56
HLA-DQB2P05538 DYDC1-202ENST00000372204 750 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
HLA-DQB2P05538 RCAN3-201ENST00000374393 382 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
HLA-DQB2P05538 SNORA5.1-201ENST00000384275 131 ntBASIC5.32□□□□□ -1.56
HLA-DQB2P05538 AC009506.2-201ENST00000420635 840 ntBASIC5.32□□□□□ -1.56
HLA-DQB2P05538 EI24P4-201ENST00000423683 1078 ntBASIC5.32□□□□□ -1.56
HLA-DQB2P05538 AC093655.2-201ENST00000425735 631 ntBASIC5.32□□□□□ -1.56
HLA-DQB2P05538 VAV3-AS1-201ENST00000438318 619 ntTSL 2 BASIC5.32□□□□□ -1.56
HLA-DQB2P05538 AC092637.1-201ENST00000444745 510 ntTSL 5 BASIC5.32□□□□□ -1.56
HLA-DQB2P05538 AL589703.1-201ENST00000456032 256 ntTSL 5 BASIC5.32□□□□□ -1.56
HLA-DQB2P05538 RN7SL189P-201ENST00000468631 289 ntBASIC5.32□□□□□ -1.56
HLA-DQB2P05538 COPS8P2-201ENST00000473228 627 ntBASIC5.32□□□□□ -1.56
HLA-DQB2P05538 AC016651.1-201ENST00000502680 822 ntTSL 3 BASIC5.32□□□□□ -1.56
HLA-DQB2P05538 RPS4XP20-201ENST00000505751 772 ntBASIC5.32□□□□□ -1.56
HLA-DQB2P05538 AC098976.1-201ENST00000513014 541 ntBASIC5.32□□□□□ -1.56
HLA-DQB2P05538 EIF3KP3-201ENST00000514461 639 ntBASIC5.32□□□□□ -1.56
HLA-DQB2P05538 HNF1A-AS1-203ENST00000537361 659 ntTSL 3 BASIC5.32□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 97.6 ms