Protein–RNA interactions for Protein: P04114

APOB, Apolipoprotein B-100, humanhuman

Known RBP Predictions only

Length 4,563 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBP04114 CNOT7-201ENST00000361272 6913 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
APOBP04114 IQGAP2-204ENST00000502745 3404 ntTSL 2 BASIC3.16□□□□□ -1.9
APOBP04114 USMG5-203ENST00000369811 635 ntAPPRIS P1 TSL 2 BASIC3.16□□□□□ -1.9
APOBP04114 MIR589-201ENST00000385238 99 ntBASIC3.16□□□□□ -1.9
APOBP04114 RPL23AP59-201ENST00000399415 461 ntBASIC3.16□□□□□ -1.9
APOBP04114 SNORA11.2-201ENST00000408318 127 ntBASIC3.16□□□□□ -1.9
APOBP04114 RNF10P1-201ENST00000418589 369 ntBASIC3.16□□□□□ -1.9
APOBP04114 AL136084.2-202ENST00000433997 353 ntTSL 2 BASIC3.16□□□□□ -1.9
APOBP04114 LINC01423-202ENST00000436845 423 ntTSL 2 BASIC3.16□□□□□ -1.9
APOBP04114 RPL7P32-201ENST00000457119 744 ntBASIC3.16□□□□□ -1.9
APOBP04114 RN7SL814P-201ENST00000487715 300 ntBASIC3.16□□□□□ -1.9
APOBP04114 CD200R1-205ENST00000490004 778 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
APOBP04114 RNA5SP143-201ENST00000516936 115 ntBASIC3.16□□□□□ -1.9
APOBP04114 EQTN-204ENST00000537675 879 ntAPPRIS ALT2 TSL 1 (best) BASIC3.16□□□□□ -1.9
APOBP04114 AC015845.1-202ENST00000580184 242 ntTSL 3 BASIC3.16□□□□□ -1.9
APOBP04114 AC090948.1-201ENST00000607464 549 ntBASIC3.16□□□□□ -1.9
APOBP04114 ATP5A1P4-201ENST00000556888 1605 ntBASIC3.16□□□□□ -1.9
APOBP04114 CSMD1-202ENST00000400186 10938 ntAPPRIS ALT2 TSL 5 BASIC3.16□□□□□ -1.9
APOBP04114 CSMD1-217ENST00000602723 10938 ntAPPRIS ALT2 TSL 5 BASIC3.16□□□□□ -1.9
APOBP04114 ADAM22-205ENST00000398209 9144 ntAPPRIS P4 TSL 1 (best) BASIC3.16□□□□□ -1.9
APOBP04114 ZKSCAN1-201ENST00000324306 9418 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
APOBP04114 NR5A2-203ENST00000367362 5086 ntAPPRIS P3 TSL 1 (best) BASIC3.16□□□□□ -1.9
APOBP04114 MEF2A-201ENST00000338042 5464 ntAPPRIS ALT1 TSL 2 BASIC3.16□□□□□ -1.9
APOBP04114 AC090220.1-201ENST00000593078 1699 ntBASIC3.16□□□□□ -1.9
APOBP04114 ACSL5-204ENST00000393081 3380 ntAPPRIS P1 TSL 5 BASIC3.16□□□□□ -1.9
APOBP04114 AL627309.5-201ENST00000484859 4860 ntTSL 5 BASIC3.16□□□□□ -1.9
APOBP04114 NLGN4X-204ENST00000381095 5870 ntAPPRIS P2 TSL 1 (best) BASIC3.16□□□□□ -1.9
APOBP04114 C5orf34-201ENST00000306862 2507 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
APOBP04114 SLC12A6-204ENST00000397707 4194 ntTSL 1 (best) BASIC3.15□□□□□ -1.9
APOBP04114 CASP10-204ENST00000346817 3926 ntAPPRIS ALT2 TSL 5 BASIC3.15□□□□□ -1.9
APOBP04114 RN7SKP145-201ENST00000363291 303 ntBASIC3.15□□□□□ -1.9
APOBP04114 GTF2IP5-201ENST00000414608 731 ntBASIC3.15□□□□□ -1.9
APOBP04114 AC097523.2-201ENST00000435551 652 ntBASIC3.15□□□□□ -1.9
APOBP04114 IGBP1P3-201ENST00000447449 1000 ntBASIC3.15□□□□□ -1.9
APOBP04114 Z95152.1-201ENST00000453556 656 ntBASIC3.15□□□□□ -1.9
APOBP04114 COX7A2-205ENST00000460985 357 ntTSL 2 BASIC3.15□□□□□ -1.9
APOBP04114 RERG-AS1-201ENST00000541243 337 ntTSL 2 BASIC3.15□□□□□ -1.9
APOBP04114 EIF1P5-201ENST00000585002 234 ntBASIC3.15□□□□□ -1.9
APOBP04114 DAB1-AS1-208ENST00000586465 748 ntTSL 5 BASIC3.15□□□□□ -1.9
APOBP04114 AC069200.1-201ENST00000609511 323 ntBASIC3.15□□□□□ -1.9
APOBP04114 ROBO2-201ENST00000332191 5437 ntAPPRIS ALT2 TSL 5 BASIC3.15□□□□□ -1.9
APOBP04114 USP50-205ENST00000616326 1419 ntAPPRIS ALT2 TSL 5 BASIC3.15□□□□□ -1.9
APOBP04114 NKAIN2-204ENST00000545433 3052 ntTSL 5 BASIC3.15□□□□□ -1.9
APOBP04114 Z99129.3-201ENST00000624363 6430 ntTSL 2 BASIC3.15□□□□□ -1.9
APOBP04114 AC019080.1-201ENST00000397057 5202 ntTSL 1 (best) BASIC3.15□□□□□ -1.9
APOBP04114 TULP4-202ENST00000367097 11295 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.9
APOBP04114 OR2F1-203ENST00000641412 4829 ntAPPRIS P1 BASIC3.15□□□□□ -1.9
APOBP04114 USP29-201ENST00000254181 3705 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.9
APOBP04114 DSG3-201ENST00000257189 5525 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.9
APOBP04114 OR4F5-202ENST00000641515 2618 ntAPPRIS P1 BASIC3.15□□□□□ -1.9
APOBP04114 SCAPER-202ENST00000324767 4707 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.9
APOBP04114 RNA5SP90-201ENST00000364801 99 ntBASIC3.15□□□□□ -1.9
APOBP04114 IGLV5-48-201ENST00000390293 369 ntAPPRIS P1 BASIC3.15□□□□□ -1.9
APOBP04114 RPS26P38-201ENST00000414476 348 ntBASIC3.15□□□□□ -1.9
APOBP04114 AC073465.2-201ENST00000440938 498 ntBASIC3.15□□□□□ -1.9
APOBP04114 RN7SL188P-201ENST00000469842 285 ntBASIC3.15□□□□□ -1.9
APOBP04114 AC092683.1-209ENST00000612970 1105 ntTSL 5 BASIC3.15□□□□□ -1.9
APOBP04114 ZYXP1-201ENST00000617638 118 ntBASIC3.15□□□□□ -1.9
APOBP04114 AC004836.1-201ENST00000623032 634 ntBASIC3.15□□□□□ -1.9
APOBP04114 MFSD8-220ENST00000641243 1422 ntBASIC3.15□□□□□ -1.9
APOBP04114 BRCA1-210ENST00000471181 5936 ntTSL 1 (best) BASIC3.15□□□□□ -1.9
APOBP04114 DOCK11P1-201ENST00000553480 5932 ntBASIC3.15□□□□□ -1.9
APOBP04114 ZNF559-ZNF177-201ENST00000434737 2340 ntAPPRIS ALT2 TSL 2 BASIC3.15□□□□□ -1.9
APOBP04114 SETBP1-201ENST00000282030 9899 ntAPPRIS P3 TSL 1 (best) BASIC3.15□□□□□ -1.91
APOBP04114 PIGN-217ENST00000591238 1622 ntTSL 5 BASIC3.15□□□□□ -1.91
APOBP04114 ZNF37A-202ENST00000361085 8738 ntAPPRIS P1 TSL 2 BASIC3.15□□□□□ -1.91
APOBP04114 GRIK2-203ENST00000369134 4185 ntTSL 5 BASIC3.15□□□□□ -1.91
APOBP04114 LINC00630-201ENST00000416381 2012 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
APOBP04114 LIMA1-215ENST00000552823 3254 ntAPPRIS ALT2 TSL 2 BASIC3.15□□□□□ -1.91
APOBP04114 NUP37-201ENST00000251074 1203 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
APOBP04114 RN7SKP280-201ENST00000364196 304 ntBASIC3.15□□□□□ -1.91
APOBP04114 RNA5SP397-201ENST00000391323 118 ntBASIC3.15□□□□□ -1.91
APOBP04114 DEFB115-201ENST00000400552 267 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
APOBP04114 AC006065.1-201ENST00000422539 802 ntBASIC3.15□□□□□ -1.91
APOBP04114 AL354824.1-201ENST00000424931 349 ntTSL 3 BASIC3.15□□□□□ -1.91
APOBP04114 YWHAZP2-201ENST00000440317 728 ntBASIC3.15□□□□□ -1.91
APOBP04114 AC041039.1-201ENST00000485656 536 ntBASIC3.15□□□□□ -1.91
APOBP04114 AC010230.1-201ENST00000514115 443 ntTSL 3 BASIC3.15□□□□□ -1.91
APOBP04114 RPL7P50-201ENST00000600588 727 ntBASIC3.15□□□□□ -1.91
APOBP04114 AL139041.1-201ENST00000605480 610 ntBASIC3.15□□□□□ -1.91
APOBP04114 SPINK5-202ENST00000359874 3656 ntAPPRIS ALT2 TSL 1 (best) BASIC3.15□□□□□ -1.91
APOBP04114 ART4-201ENST00000228936 5129 ntAPPRIS P2 TSL 1 (best) BASIC3.15□□□□□ -1.91
APOBP04114 BLZF1-203ENST00000367808 2749 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
APOBP04114 LRRC53-201ENST00000294635 3859 ntAPPRIS P1 TSL 5 BASIC3.15□□□□□ -1.91
APOBP04114 RUNX1T1-250ENST00000614812 7483 ntAPPRIS P3 TSL 5 BASIC3.15□□□□□ -1.91
APOBP04114 NCOR1-204ENST00000395851 7950 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
APOBP04114 SMC2-202ENST00000374787 4266 ntAPPRIS P1 TSL 2 BASIC3.15□□□□□ -1.91
APOBP04114 FRMPD4-202ENST00000616992 7916 ntAPPRIS ALT2 TSL 5 BASIC3.15□□□□□ -1.91
APOBP04114 HSDL2-201ENST00000398803 2983 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
APOBP04114 YTHDC1-207ENST00000579690 2983 ntAPPRIS ALT2 TSL 5 BASIC3.15□□□□□ -1.91
APOBP04114 AC007114.2-201ENST00000576014 4281 ntBASIC3.15□□□□□ -1.91
APOBP04114 IL13RA2-201ENST00000243213 1371 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
APOBP04114 NRG3-202ENST00000372142 3136 ntAPPRIS ALT2 TSL 1 (best) BASIC3.15□□□□□ -1.91
APOBP04114 FREM2-201ENST00000280481 16070 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
APOBP04114 RAPGEF4-213ENST00000535187 3707 ntTSL 2 BASIC3.15□□□□□ -1.91
APOBP04114 GAPT-202ENST00000396776 3016 ntAPPRIS P1 TSL 2 BASIC3.15□□□□□ -1.91
APOBP04114 OTUD7B-202ENST00000581312 8872 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
APOBP04114 SNORA70H-201ENST00000383910 135 ntBASIC3.15□□□□□ -1.91
APOBP04114 SNORA70J-201ENST00000384182 135 ntBASIC3.15□□□□□ -1.91
APOBP04114 RPL6P5-201ENST00000445678 828 ntBASIC3.15□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 89.9 ms