Protein–RNA interactions for Protein: P01909

HLA-DQA1, HLA class II histocompatibility antigen, DQ alpha 1 chain, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1P01909 LINC00320-204ENST00000437238 2004 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
HLA-DQA1P01909 DLG1-216ENST00000450955 2682 ntAPPRIS ALT1 TSL 5 BASIC4.06□□□□□ -1.76
HLA-DQA1P01909 OR9G4-201ENST00000302957 984 ntBASIC4.06□□□□□ -1.76
HLA-DQA1P01909 METTL5-202ENST00000308099 629 ntTSL 3 BASIC4.06□□□□□ -1.76
HLA-DQA1P01909 CLEC7A-203ENST00000310002 425 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
HLA-DQA1P01909 REP15-201ENST00000310791 1078 ntAPPRIS P1 BASIC4.06□□□□□ -1.76
HLA-DQA1P01909 OR4N2-201ENST00000315947 924 ntAPPRIS P1 BASIC4.06□□□□□ -1.76
HLA-DQA1P01909 SELENOWP1-201ENST00000322792 252 ntBASIC4.06□□□□□ -1.76
HLA-DQA1P01909 SPRR2D-201ENST00000360379 682 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
HLA-DQA1P01909 RN7SKP28-201ENST00000364770 305 ntBASIC4.06□□□□□ -1.76
HLA-DQA1P01909 RN7SKP153-201ENST00000365026 316 ntBASIC4.06□□□□□ -1.76
HLA-DQA1P01909 AC117402.1-202ENST00000383686 820 ntTSL 2 BASIC4.06□□□□□ -1.76
HLA-DQA1P01909 PPP1R7-203ENST00000401987 820 ntTSL 3 BASIC4.06□□□□□ -1.76
HLA-DQA1P01909 AC016739.1-201ENST00000405359 345 ntBASIC4.06□□□□□ -1.76
HLA-DQA1P01909 CBX1P3-201ENST00000413296 527 ntBASIC4.06□□□□□ -1.76
HLA-DQA1P01909 AL049712.1-201ENST00000418739 872 ntTSL 3 BASIC4.06□□□□□ -1.76
HLA-DQA1P01909 KIF4CP-201ENST00000422742 1279 ntBASIC4.06□□□□□ -1.76
HLA-DQA1P01909 GAPDHP59-201ENST00000435908 267 ntBASIC4.06□□□□□ -1.76
HLA-DQA1P01909 AL162386.2-201ENST00000442428 457 ntTSL 3 BASIC4.06□□□□□ -1.76
HLA-DQA1P01909 RPL6P30-201ENST00000443382 862 ntBASIC4.06□□□□□ -1.76
HLA-DQA1P01909 AL096855.1-202ENST00000444276 439 ntTSL 2 BASIC4.06□□□□□ -1.76
HLA-DQA1P01909 AC003991.1-205ENST00000447758 625 ntTSL 5 BASIC4.06□□□□□ -1.76
HLA-DQA1P01909 AL445466.1-201ENST00000448432 357 ntBASIC4.06□□□□□ -1.76
HLA-DQA1P01909 AC112206.1-201ENST00000468416 477 ntBASIC4.06□□□□□ -1.76
HLA-DQA1P01909 AC022795.1-201ENST00000473808 480 ntBASIC4.06□□□□□ -1.76
HLA-DQA1P01909 KDELR2-206ENST00000490996 655 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
HLA-DQA1P01909 RN7SL447P-201ENST00000494711 245 ntBASIC4.06□□□□□ -1.76
HLA-DQA1P01909 AC122718.2-201ENST00000505325 591 ntBASIC4.06□□□□□ -1.76
HLA-DQA1P01909 UCHL1-AS1-201ENST00000507190 592 ntTSL 4 BASIC4.06□□□□□ -1.76
HLA-DQA1P01909 AC008413.2-201ENST00000507398 342 ntTSL 3 BASIC4.06□□□□□ -1.76
HLA-DQA1P01909 RPL37-204ENST00000508493 553 ntAPPRIS ALT1 TSL 1 (best) BASIC4.06□□□□□ -1.76
HLA-DQA1P01909 B4GALNT2P1-201ENST00000508857 307 ntBASIC4.06□□□□□ -1.76
HLA-DQA1P01909 CENPK-210ENST00000510354 1124 ntTSL 5 BASIC4.06□□□□□ -1.76
HLA-DQA1P01909 APOBEC3AP1-201ENST00000511396 287 ntBASIC4.06□□□□□ -1.76
HLA-DQA1P01909 AC008957.1-202ENST00000512329 681 ntTSL 3 BASIC4.06□□□□□ -1.76
HLA-DQA1P01909 AC105031.1-201ENST00000518550 476 ntBASIC4.06□□□□□ -1.76
HLA-DQA1P01909 AC069208.1-201ENST00000540811 676 ntTSL 4 BASIC4.06□□□□□ -1.76
HLA-DQA1P01909 GPRC5D-AS1-208ENST00000545914 566 ntTSL 3 BASIC4.06□□□□□ -1.76
HLA-DQA1P01909 TRDN-205ENST00000546248 1179 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
HLA-DQA1P01909 LINC02392-201ENST00000548172 537 ntTSL 4 BASIC4.06□□□□□ -1.76
HLA-DQA1P01909 LINC01580-202ENST00000555364 661 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
HLA-DQA1P01909 AC091078.2-201ENST00000557145 559 ntBASIC4.06□□□□□ -1.76
HLA-DQA1P01909 AC084782.2-201ENST00000561934 839 ntTSL 3 BASIC4.06□□□□□ -1.76
HLA-DQA1P01909 LINC02563-201ENST00000579474 277 ntTSL 3 BASIC4.06□□□□□ -1.76
HLA-DQA1P01909 AC004596.1-201ENST00000586560 528 ntTSL 3 BASIC4.06□□□□□ -1.76
HLA-DQA1P01909 APOC2-205ENST00000592257 444 ntTSL 3 BASIC4.06□□□□□ -1.76
HLA-DQA1P01909 IGFL2-AS1-206ENST00000601263 446 ntTSL 3 BASIC4.06□□□□□ -1.76
HLA-DQA1P01909 AL353811.1-202ENST00000602614 618 ntTSL 3 BASIC4.06□□□□□ -1.76
HLA-DQA1P01909 MIR6889-201ENST00000613185 59 ntBASIC4.06□□□□□ -1.76
HLA-DQA1P01909 AC025574.2-201ENST00000615621 514 ntBASIC4.06□□□□□ -1.76
HLA-DQA1P01909 AL356752.1-201ENST00000615844 593 ntBASIC4.06□□□□□ -1.76
HLA-DQA1P01909 MIR8069-1-201ENST00000616627 86 ntBASIC4.06□□□□□ -1.76
HLA-DQA1P01909 MIR6721-201ENST00000617181 87 ntBASIC4.06□□□□□ -1.76
HLA-DQA1P01909 MIR8069-2-201ENST00000621412 86 ntBASIC4.06□□□□□ -1.76
HLA-DQA1P01909 OR52B4-201ENST00000624801 1124 ntAPPRIS P1 BASIC4.06□□□□□ -1.76
HLA-DQA1P01909 LINC02342-201ENST00000627910 461 ntTSL 5 BASIC4.06□□□□□ -1.76
HLA-DQA1P01909 OR2AK2-202ENST00000641852 1008 ntAPPRIS P2 BASIC4.06□□□□□ -1.76
HLA-DQA1P01909 SLC4A10-203ENST00000415876 5578 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
HLA-DQA1P01909 DNAH8-201ENST00000327475 14360 ntAPPRIS P2 TSL 5 BASIC4.06□□□□□ -1.76
HLA-DQA1P01909 DCN-201ENST00000052754 7156 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
HLA-DQA1P01909 EIF4E3-202ENST00000389826 6083 ntTSL 5 BASIC4.06□□□□□ -1.76
HLA-DQA1P01909 TRAPPC13-201ENST00000231526 2715 ntAPPRIS ALT1 TSL 5 BASIC4.06□□□□□ -1.76
HLA-DQA1P01909 MT-RNR2-201ENST00000387347 1559 ntBASIC4.06□□□□□ -1.76
HLA-DQA1P01909 B3GNT5-201ENST00000326505 4123 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
HLA-DQA1P01909 MED23-203ENST00000368058 4576 ntTSL 5 BASIC4.05□□□□□ -1.76
HLA-DQA1P01909 KCNJ1-206ENST00000440599 2539 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
HLA-DQA1P01909 C2CD6-202ENST00000439140 5512 ntAPPRIS ALT2 TSL 1 (best) BASIC4.05□□□□□ -1.76
HLA-DQA1P01909 RBPJP2-201ENST00000618187 1444 ntBASIC4.05□□□□□ -1.76
HLA-DQA1P01909 CEP120-203ENST00000328236 4710 ntAPPRIS P1 TSL 5 BASIC4.05□□□□□ -1.76
HLA-DQA1P01909 IKZF3-213ENST00000439167 1879 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
HLA-DQA1P01909 GABRA1-218ENST00000637827 1838 ntAPPRIS P1 TSL 5 BASIC4.05□□□□□ -1.76
HLA-DQA1P01909 P2RY14-202ENST00000424796 1780 ntAPPRIS P1 TSL 2 BASIC4.05□□□□□ -1.76
HLA-DQA1P01909 WEE2-201ENST00000397541 3061 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
HLA-DQA1P01909 SYT14-206ENST00000537238 5208 ntAPPRIS ALT2 TSL 5 BASIC4.05□□□□□ -1.76
HLA-DQA1P01909 OR5A1-202ENST00000641045 8612 ntAPPRIS P1 BASIC4.05□□□□□ -1.76
HLA-DQA1P01909 MYO3A-202ENST00000376301 727 ntTSL 5 BASIC4.05□□□□□ -1.76
HLA-DQA1P01909 GCNT1P4-201ENST00000404096 329 ntBASIC4.05□□□□□ -1.76
HLA-DQA1P01909 RN7SKP199-201ENST00000410325 305 ntBASIC4.05□□□□□ -1.76
HLA-DQA1P01909 AL109610.1-201ENST00000414598 431 ntTSL 3 BASIC4.05□□□□□ -1.76
HLA-DQA1P01909 AC087380.1-202ENST00000415970 1163 ntTSL 2 BASIC4.05□□□□□ -1.76
HLA-DQA1P01909 AL512353.1-202ENST00000416809 627 ntTSL 3 BASIC4.05□□□□□ -1.76
HLA-DQA1P01909 AC114803.1-201ENST00000417355 311 ntTSL 3 BASIC4.05□□□□□ -1.76
HLA-DQA1P01909 AC023347.1-202ENST00000419223 440 ntTSL 5 BASIC4.05□□□□□ -1.76
HLA-DQA1P01909 AF064858.3-201ENST00000419664 509 ntTSL 5 BASIC4.05□□□□□ -1.76
HLA-DQA1P01909 AC104170.2-201ENST00000424246 678 ntTSL 3 BASIC4.05□□□□□ -1.76
HLA-DQA1P01909 AL391704.3-201ENST00000425365 831 ntTSL 3 BASIC4.05□□□□□ -1.76
HLA-DQA1P01909 TRGV7-201ENST00000427089 353 ntBASIC4.05□□□□□ -1.76
HLA-DQA1P01909 AC074011.1-201ENST00000431376 581 ntTSL 4 BASIC4.05□□□□□ -1.76
HLA-DQA1P01909 AL353804.1-201ENST00000444482 451 ntTSL 5 BASIC4.05□□□□□ -1.76
HLA-DQA1P01909 AL590004.3-202ENST00000445883 451 ntBASIC4.05□□□□□ -1.76
HLA-DQA1P01909 TIMM8BP2-201ENST00000445940 251 ntBASIC4.05□□□□□ -1.76
HLA-DQA1P01909 BTF3P6-201ENST00000448054 499 ntBASIC4.05□□□□□ -1.76
HLA-DQA1P01909 MTND6P5-201ENST00000448266 512 ntBASIC4.05□□□□□ -1.76
HLA-DQA1P01909 WDR11-AS1-201ENST00000451706 1108 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
HLA-DQA1P01909 AC118758.1-202ENST00000454719 225 ntBASIC4.05□□□□□ -1.76
HLA-DQA1P01909 LINC01436-201ENST00000457157 1048 ntTSL 2 BASIC4.05□□□□□ -1.76
HLA-DQA1P01909 AC019084.1-201ENST00000457337 432 ntBASIC4.05□□□□□ -1.76
HLA-DQA1P01909 AC011225.1-201ENST00000457751 369 ntBASIC4.05□□□□□ -1.76
HLA-DQA1P01909 AC104849.1-201ENST00000462623 405 ntBASIC4.05□□□□□ -1.76
HLA-DQA1P01909 AC021006.1-201ENST00000489849 553 ntBASIC4.05□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 91.7 ms