Protein–RNA interactions for Protein: P01127

PDGFB, Platelet-derived growth factor subunit B, humanhuman

Predicted RBP Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFBP01127 AL391261.1-201ENST00000555712 1479 ntBASIC5.64□□□□□ -1.51
PDGFBP01127 CNOT1-202ENST00000441024 4999 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
PDGFBP01127 MDM4-217ENST00000621032 5592 ntTSL 2 BASIC5.64□□□□□ -1.51
PDGFBP01127 PGBD4-201ENST00000397766 6612 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
PDGFBP01127 RAB30-214ENST00000534141 3746 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
PDGFBP01127 ARIH1-201ENST00000379887 21681 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
PDGFBP01127 LMNTD1-207ENST00000539744 1729 ntAPPRIS ALT2 TSL 1 (best) BASIC5.63□□□□□ -1.51
PDGFBP01127 TTC39C-201ENST00000304621 2304 ntAPPRIS P3 TSL 1 (best) BASIC5.63□□□□□ -1.51
PDGFBP01127 OR52N1-202ENST00000641645 2545 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
PDGFBP01127 NR5A2-203ENST00000367362 5086 ntAPPRIS P3 TSL 1 (best) BASIC5.63□□□□□ -1.51
PDGFBP01127 RNU6-1331P-201ENST00000363658 106 ntBASIC5.63□□□□□ -1.51
PDGFBP01127 SAR1A-201ENST00000373236 437 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
PDGFBP01127 AL590139.1-201ENST00000416267 400 ntBASIC5.63□□□□□ -1.51
PDGFBP01127 AL034345.2-202ENST00000416948 830 ntTSL 2 BASIC5.63□□□□□ -1.51
PDGFBP01127 AC011287.2-201ENST00000456809 842 ntTSL 5 BASIC5.63□□□□□ -1.51
PDGFBP01127 ATP5J-207ENST00000457143 589 ntTSL 2 BASIC5.63□□□□□ -1.51
PDGFBP01127 DUTP1-201ENST00000493631 470 ntBASIC5.63□□□□□ -1.51
PDGFBP01127 DUBR-205ENST00000495228 411 ntTSL 2 BASIC5.63□□□□□ -1.51
PDGFBP01127 AP000926.3-201ENST00000497201 299 ntBASIC5.63□□□□□ -1.51
PDGFBP01127 AC138965.1-202ENST00000502354 547 ntTSL 5 BASIC5.63□□□□□ -1.51
PDGFBP01127 AC140125.3-201ENST00000505248 547 ntTSL 4 BASIC5.63□□□□□ -1.51
PDGFBP01127 AC113398.2-201ENST00000507630 558 ntBASIC5.63□□□□□ -1.51
PDGFBP01127 ZBED3-AS1-209ENST00000512213 681 ntTSL 3 BASIC5.63□□□□□ -1.51
PDGFBP01127 TRAV30-201ENST00000557168 337 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
PDGFBP01127 OR4H6P-201ENST00000563771 921 ntBASIC5.63□□□□□ -1.51
PDGFBP01127 AC067852.5-201ENST00000589299 310 ntBASIC5.63□□□□□ -1.51
PDGFBP01127 AC027334.1-201ENST00000603257 310 ntBASIC5.63□□□□□ -1.51
PDGFBP01127 AC024589.2-201ENST00000605642 1294 ntBASIC5.63□□□□□ -1.51
PDGFBP01127 SAMD9L-209ENST00000610760 1221 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
PDGFBP01127 CCL4L2-215ENST00000620055 537 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
PDGFBP01127 CCL4L2-217ENST00000620250 667 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
PDGFBP01127 CCL4-203ENST00000621626 552 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
PDGFBP01127 ALB-214ENST00000509063 1911 ntTSL 5 BASIC5.63□□□□□ -1.51
PDGFBP01127 AL117378.2-201ENST00000622916 1337 ntBASIC5.63□□□□□ -1.51
PDGFBP01127 ALKBH8-205ENST00000428149 4079 ntAPPRIS P3 TSL 1 (best) BASIC5.63□□□□□ -1.51
PDGFBP01127 FAM26D-201ENST00000368596 1353 ntAPPRIS P1 TSL 5 BASIC5.63□□□□□ -1.51
PDGFBP01127 AL360014.1-201ENST00000562922 2084 ntTSL 3 BASIC5.63□□□□□ -1.51
PDGFBP01127 ZNF780A-204ENST00000455521 3600 ntAPPRIS ALT2 TSL 5 BASIC5.63□□□□□ -1.51
PDGFBP01127 TLK2-214ENST00000582809 3608 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
PDGFBP01127 SPATA17-201ENST00000366933 5818 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
PDGFBP01127 OBSCN-201ENST00000284548 20432 ntTSL 2 BASIC5.63□□□□□ -1.51
PDGFBP01127 MDGA2-201ENST00000357362 2965 ntTSL 5 BASIC5.63□□□□□ -1.51
PDGFBP01127 PATE1-201ENST00000305738 1527 ntAPPRIS P2 TSL 1 (best) BASIC5.63□□□□□ -1.51
PDGFBP01127 LNPK-212ENST00000544803 7647 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
PDGFBP01127 TNKS-206ENST00000518281 3897 ntTSL 2 BASIC5.63□□□□□ -1.51
PDGFBP01127 FLJ12825-201ENST00000515617 3942 ntTSL 2 BASIC5.63□□□□□ -1.51
PDGFBP01127 RUBCNL-205ENST00000389908 3956 ntAPPRIS P3 TSL 2 BASIC5.63□□□□□ -1.51
PDGFBP01127 INTS6P1-201ENST00000504674 2530 ntBASIC5.63□□□□□ -1.51
PDGFBP01127 ATP2C1-203ENST00000422190 3386 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
PDGFBP01127 MRC1-201ENST00000569591 5198 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
PDGFBP01127 LINC02397-201ENST00000504409 10626 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
PDGFBP01127 ALKBH3-AS1-201ENST00000499194 1906 ntTSL 2 BASIC5.62□□□□□ -1.51
PDGFBP01127 AJ009632.2-208ENST00000635525 4123 ntTSL 5 BASIC5.62□□□□□ -1.51
PDGFBP01127 NOL8-214ENST00000535387 3390 ntAPPRIS ALT2 TSL 5 BASIC5.62□□□□□ -1.51
PDGFBP01127 ZNF699-203ENST00000591998 3358 ntAPPRIS P1 TSL 5 BASIC5.62□□□□□ -1.51
PDGFBP01127 GNG2-212ENST00000556752 3424 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
PDGFBP01127 CHD6-202ENST00000373222 2477 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
PDGFBP01127 MGP-201ENST00000228938 694 ntTSL 3 BASIC5.62□□□□□ -1.51
PDGFBP01127 RPL32P3-201ENST00000359025 275 ntBASIC5.62□□□□□ -1.51
PDGFBP01127 LY6G5C-210ENST00000383237 674 ntAPPRIS P2 TSL 1 (best) BASIC5.62□□□□□ -1.51
PDGFBP01127 RNU6-398P-201ENST00000384143 109 ntBASIC5.62□□□□□ -1.51
PDGFBP01127 MIR551A-201ENST00000385042 96 ntBASIC5.62□□□□□ -1.51
PDGFBP01127 DEFB113-201ENST00000398718 249 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
PDGFBP01127 DNAJA1P4-201ENST00000406473 1166 ntBASIC5.62□□□□□ -1.51
PDGFBP01127 KCNJ13-202ENST00000409779 1099 ntTSL 2 BASIC5.62□□□□□ -1.51
PDGFBP01127 LINC01614-201ENST00000415479 648 ntTSL 2 BASIC5.62□□□□□ -1.51
PDGFBP01127 RPL23AP18-201ENST00000416139 468 ntBASIC5.62□□□□□ -1.51
PDGFBP01127 P2RY10P2-201ENST00000416730 913 ntBASIC5.62□□□□□ -1.51
PDGFBP01127 AL590723.1-201ENST00000426030 629 ntTSL 5 BASIC5.62□□□□□ -1.51
PDGFBP01127 FTLP19-201ENST00000433300 394 ntBASIC5.62□□□□□ -1.51
PDGFBP01127 AC008072.1-201ENST00000434254 824 ntBASIC5.62□□□□□ -1.51
PDGFBP01127 LINC01645-201ENST00000451341 491 ntTSL 3 BASIC5.62□□□□□ -1.51
PDGFBP01127 RNU1-88P-201ENST00000459274 128 ntBASIC5.62□□□□□ -1.51
PDGFBP01127 AC098583.1-201ENST00000480875 255 ntBASIC5.62□□□□□ -1.51
PDGFBP01127 OR7H2P-201ENST00000513483 306 ntBASIC5.62□□□□□ -1.51
PDGFBP01127 WASHC5-AS1-201ENST00000519140 587 ntTSL 4 BASIC5.62□□□□□ -1.51
PDGFBP01127 C1GALT1P3-201ENST00000522049 819 ntBASIC5.62□□□□□ -1.51
PDGFBP01127 AL078612.2-201ENST00000525133 646 ntTSL 3 BASIC5.62□□□□□ -1.51
PDGFBP01127 AP001267.3-204ENST00000528578 423 ntTSL 3 BASIC5.62□□□□□ -1.51
PDGFBP01127 LINS1-207ENST00000560133 1196 ntTSL 2 BASIC5.62□□□□□ -1.51
PDGFBP01127 AC104687.2-201ENST00000604442 342 ntBASIC5.62□□□□□ -1.51
PDGFBP01127 AC012414.7-202ENST00000622705 1090 ntBASIC5.62□□□□□ -1.51
PDGFBP01127 OR5H15-202ENST00000641450 1229 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
PDGFBP01127 AC123767.1-201ENST00000519537 1439 ntTSL 5 BASIC5.62□□□□□ -1.51
PDGFBP01127 OSBPL9-203ENST00000428468 2893 ntAPPRIS P3 TSL 1 (best) BASIC5.62□□□□□ -1.51
PDGFBP01127 WDR72-203ENST00000557913 5900 ntAPPRIS ALT1 TSL 5 BASIC5.62□□□□□ -1.51
PDGFBP01127 ITCH-201ENST00000262650 3089 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
PDGFBP01127 TCF4-284ENST00000637169 7553 ntTSL 5 BASIC5.62□□□□□ -1.51
PDGFBP01127 ZNF273-204ENST00000476120 2000 ntAPPRIS P1 TSL 3 BASIC5.62□□□□□ -1.51
PDGFBP01127 DNAH3-201ENST00000261383 12394 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
PDGFBP01127 GTDC1-220ENST00000618778 2317 ntTSL 5 BASIC5.62□□□□□ -1.51
PDGFBP01127 SLAMF6-202ENST00000368057 2712 ntAPPRIS ALT2 TSL 1 (best) BASIC5.61□□□□□ -1.51
PDGFBP01127 MAGI2-222ENST00000636039 5671 ntTSL 5 BASIC5.61□□□□□ -1.51
PDGFBP01127 BX664718.1-201ENST00000439824 3224 ntTSL 2 BASIC5.61□□□□□ -1.51
PDGFBP01127 C16orf87-202ENST00000394806 6640 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
PDGFBP01127 OR2AT4-202ENST00000641504 8661 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
PDGFBP01127 OR10A6-204ENST00000642108 6104 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
PDGFBP01127 PRKDC-202ENST00000338368 12784 ntAPPRIS ALT2 TSL 1 (best) BASIC5.61□□□□□ -1.51
PDGFBP01127 CYP3A43-201ENST00000222382 1515 ntAPPRIS P4 TSL 1 (best) BASIC5.61□□□□□ -1.51
PDGFBP01127 SPINK7-201ENST00000274565 557 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 104.2 ms