Protein–RNA interactions for Protein: O95096

NKX2-2, Homeobox protein Nkx-2.2, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-2O95096 AC024933.1-201ENST00000608472 348 ntBASIC5.29□□□□□ -1.56
NKX2-2O95096 AP001033.2-201ENST00000609701 1003 ntBASIC5.29□□□□□ -1.56
NKX2-2O95096 AC090607.5-201ENST00000615692 224 ntBASIC5.29□□□□□ -1.56
NKX2-2O95096 Metazoa_SRP.43-201ENST00000616394 271 ntBASIC5.29□□□□□ -1.56
NKX2-2O95096 RSU1P2-204ENST00000619977 1240 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
NKX2-2O95096 AC095038.2-201ENST00000621464 1070 ntBASIC5.29□□□□□ -1.56
NKX2-2O95096 LINC01620-204ENST00000623295 700 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
NKX2-2O95096 AC079776.5-201ENST00000641920 211 ntBASIC5.29□□□□□ -1.56
NKX2-2O95096 MRE11-203ENST00000393241 2604 ntAPPRIS ALT1 TSL 5 BASIC5.29□□□□□ -1.56
NKX2-2O95096 SYCP2L-207ENST00000543878 2436 ntAPPRIS ALT2 TSL 5 BASIC5.29□□□□□ -1.56
NKX2-2O95096 GPR87-201ENST00000260843 1608 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
NKX2-2O95096 MTCO1P4-201ENST00000520516 1409 ntBASIC5.29□□□□□ -1.56
NKX2-2O95096 NFAT5-212ENST00000627621 5875 ntAPPRIS ALT1 TSL 2 BASIC5.29□□□□□ -1.56
NKX2-2O95096 MYBPC1-216ENST00000550270 3426 ntAPPRIS ALT2 TSL 5 BASIC5.29□□□□□ -1.56
NKX2-2O95096 MCM10-202ENST00000378714 4547 ntAPPRIS ALT2 TSL 1 (best) BASIC5.29□□□□□ -1.56
NKX2-2O95096 CBX5-201ENST00000209875 11528 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
NKX2-2O95096 TGIF1-204ENST00000400167 1352 ntTSL 3 BASIC5.29□□□□□ -1.56
NKX2-2O95096 TCF7L2-219ENST00000542695 4136 ntTSL 5 BASIC5.29□□□□□ -1.56
NKX2-2O95096 EEF1A1P33-201ENST00000554413 1362 ntBASIC5.29□□□□□ -1.56
NKX2-2O95096 AC138907.8-201ENST00000623981 2256 ntBASIC5.28□□□□□ -1.56
NKX2-2O95096 AL121950.1-201ENST00000624993 2077 ntBASIC5.28□□□□□ -1.56
NKX2-2O95096 SLMAP-208ENST00000449503 4027 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
NKX2-2O95096 IL1R1-204ENST00000409929 1858 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
NKX2-2O95096 VCAN-203ENST00000343200 9455 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
NKX2-2O95096 AL160286.3-201ENST00000569644 3294 ntTSL 2 BASIC5.28□□□□□ -1.56
NKX2-2O95096 TAF9-205ENST00000506736 1331 ntAPPRIS P2 TSL 1 (best) BASIC5.28□□□□□ -1.56
NKX2-2O95096 RBM41-201ENST00000372479 1662 ntAPPRIS P3 TSL 1 (best) BASIC5.28□□□□□ -1.56
NKX2-2O95096 ATXN7-208ENST00000484332 2741 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
NKX2-2O95096 LINC00707-201ENST00000436383 3070 ntTSL 2 BASIC5.28□□□□□ -1.56
NKX2-2O95096 SLC12A1-205ENST00000558405 3426 ntAPPRIS P3 TSL 1 (best) BASIC5.28□□□□□ -1.56
NKX2-2O95096 HYKK-206ENST00000569878 4097 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
NKX2-2O95096 ARHGAP20-206ENST00000533353 6066 ntAPPRIS ALT2 TSL 1 (best) BASIC5.28□□□□□ -1.56
NKX2-2O95096 UGT2B26P-201ENST00000508672 1613 ntBASIC5.28□□□□□ -1.56
NKX2-2O95096 AC068775.1-202ENST00000538173 1602 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
NKX2-2O95096 CFHR2-201ENST00000367415 1059 ntAPPRIS P2 TSL 1 (best) BASIC5.28□□□□□ -1.56
NKX2-2O95096 BX248415.1-201ENST00000367421 1043 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
NKX2-2O95096 RPS3AP2-201ENST00000407190 754 ntBASIC5.28□□□□□ -1.56
NKX2-2O95096 AL391863.2-201ENST00000411838 681 ntTSL 2 BASIC5.28□□□□□ -1.56
NKX2-2O95096 AC245060.4-201ENST00000413293 1121 ntBASIC5.28□□□□□ -1.56
NKX2-2O95096 AL590806.1-201ENST00000415818 853 ntBASIC5.28□□□□□ -1.56
NKX2-2O95096 AC099654.1-202ENST00000415836 564 ntTSL 4 BASIC5.28□□□□□ -1.56
NKX2-2O95096 AC092570.3-201ENST00000420113 693 ntBASIC5.28□□□□□ -1.56
NKX2-2O95096 AL360093.1-201ENST00000420237 1126 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
NKX2-2O95096 BX470102.1-201ENST00000420695 531 ntTSL 2 BASIC5.28□□□□□ -1.56
NKX2-2O95096 OR10T1P-201ENST00000424327 947 ntBASIC5.28□□□□□ -1.56
NKX2-2O95096 RPL23AP4-201ENST00000427757 463 ntBASIC5.28□□□□□ -1.56
NKX2-2O95096 HSFY7P-201ENST00000432672 318 ntBASIC5.28□□□□□ -1.56
NKX2-2O95096 HSFY8P-201ENST00000437934 318 ntBASIC5.28□□□□□ -1.56
NKX2-2O95096 AC087501.1-201ENST00000445617 715 ntTSL 5 BASIC5.28□□□□□ -1.56
NKX2-2O95096 AP001604.1-201ENST00000447384 954 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
NKX2-2O95096 AP006222.1-205ENST00000450734 457 ntBASIC5.28□□□□□ -1.56
NKX2-2O95096 HSFY5P-201ENST00000453726 309 ntBASIC5.28□□□□□ -1.56
NKX2-2O95096 AC022215.1-201ENST00000481770 362 ntBASIC5.28□□□□□ -1.56
NKX2-2O95096 AC116562.1-201ENST00000485355 781 ntBASIC5.28□□□□□ -1.56
NKX2-2O95096 LINC00483-204ENST00000502517 940 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
NKX2-2O95096 AC108120.2-201ENST00000512973 294 ntBASIC5.28□□□□□ -1.56
NKX2-2O95096 AC098829.1-202ENST00000513384 537 ntTSL 3 BASIC5.28□□□□□ -1.56
NKX2-2O95096 GAPDHP62-201ENST00000515313 990 ntBASIC5.28□□□□□ -1.56
NKX2-2O95096 SNORA70.20-201ENST00000516848 126 ntBASIC5.28□□□□□ -1.56
NKX2-2O95096 RAD21-203ENST00000517749 1003 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
NKX2-2O95096 IGKV2-19-201ENST00000518132 283 ntBASIC5.28□□□□□ -1.56
NKX2-2O95096 PKIA-AS1-201ENST00000519242 995 ntTSL 5 BASIC5.28□□□□□ -1.56
NKX2-2O95096 MAL2-207ENST00000522828 603 ntTSL 3 BASIC5.28□□□□□ -1.56
NKX2-2O95096 MTND5P21-201ENST00000531961 522 ntBASIC5.28□□□□□ -1.56
NKX2-2O95096 NANOGNBP2-201ENST00000544753 553 ntBASIC5.28□□□□□ -1.56
NKX2-2O95096 AC137627.1-201ENST00000545761 289 ntBASIC5.28□□□□□ -1.56
NKX2-2O95096 LINC02411-203ENST00000546180 959 ntTSL 4 BASIC5.28□□□□□ -1.56
NKX2-2O95096 AC084824.2-201ENST00000548906 345 ntBASIC5.28□□□□□ -1.56
NKX2-2O95096 AC023908.1-201ENST00000559899 567 ntTSL 4 BASIC5.28□□□□□ -1.56
NKX2-2O95096 AC036103.1-201ENST00000563846 823 ntTSL 5 BASIC5.28□□□□□ -1.56
NKX2-2O95096 AC092132.1-201ENST00000570859 352 ntTSL 3 BASIC5.28□□□□□ -1.56
NKX2-2O95096 AC090617.5-201ENST00000571815 528 ntTSL 3 BASIC5.28□□□□□ -1.56
NKX2-2O95096 THCAT158-201ENST00000575039 535 ntTSL 5 BASIC5.28□□□□□ -1.56
NKX2-2O95096 AP005120.1-202ENST00000584321 506 ntTSL 4 BASIC5.28□□□□□ -1.56
NKX2-2O95096 AL157938.2-205ENST00000586290 891 ntTSL 5 BASIC5.28□□□□□ -1.56
NKX2-2O95096 AC063977.5-201ENST00000601044 974 ntBASIC5.28□□□□□ -1.56
NKX2-2O95096 AC011473.1-201ENST00000601280 443 ntTSL 2 BASIC5.28□□□□□ -1.56
NKX2-2O95096 SAMD9L-209ENST00000610760 1221 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
NKX2-2O95096 AC015712.7-201ENST00000615211 635 ntBASIC5.28□□□□□ -1.56
NKX2-2O95096 AP000943.4-201ENST00000622912 357 ntBASIC5.28□□□□□ -1.56
NKX2-2O95096 AC015660.5-201ENST00000623238 564 ntBASIC5.28□□□□□ -1.56
NKX2-2O95096 PIGX-210ENST00000639143 831 ntAPPRIS ALT2 TSL 2 BASIC5.28□□□□□ -1.56
NKX2-2O95096 MSANTD2-204ENST00000526629 3086 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
NKX2-2O95096 ZNF195-201ENST00000005082 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC5.28□□□□□ -1.56
NKX2-2O95096 NEPNP-201ENST00000404786 1371 ntBASIC5.28□□□□□ -1.56
NKX2-2O95096 ZNF189-201ENST00000259395 3115 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
NKX2-2O95096 MAPK10-261ENST00000641050 3109 ntBASIC5.28□□□□□ -1.56
NKX2-2O95096 CNKSR2-202ENST00000379510 5315 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
NKX2-2O95096 SLCO1C1-208ENST00000545102 2868 ntTSL 2 BASIC5.27□□□□□ -1.57
NKX2-2O95096 AC004076.2-201ENST00000620532 3323 ntBASIC5.27□□□□□ -1.57
NKX2-2O95096 AC092070.2-203ENST00000598377 3644 ntBASIC5.27□□□□□ -1.57
NKX2-2O95096 MAK-204ENST00000536370 3767 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
NKX2-2O95096 AC006145.1-201ENST00000439234 2651 ntTSL 2 BASIC5.27□□□□□ -1.57
NKX2-2O95096 AL161901.1-201ENST00000624954 3425 ntBASIC5.27□□□□□ -1.57
NKX2-2O95096 PPIAL4G-201ENST00000419275 3856 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
NKX2-2O95096 FAS-203ENST00000355279 983 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
NKX2-2O95096 RNA5SP30-201ENST00000365552 115 ntBASIC5.27□□□□□ -1.57
NKX2-2O95096 STATH-202ENST00000381060 534 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
NKX2-2O95096 CHMP1B2P-201ENST00000399581 597 ntBASIC5.27□□□□□ -1.57
NKX2-2O95096 UQCRFS1P3-201ENST00000407697 385 ntBASIC5.27□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 127 ms