Protein–RNA interactions for Protein: O60663

LMX1B, LIM homeobox transcription factor 1-beta, humanhuman

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1BO60663 BX323845.3-201ENST00000428215 527 ntBASIC5.02□□□□□ -1.61
LMX1BO60663 GAPDHP75-201ENST00000433910 943 ntBASIC5.02□□□□□ -1.61
LMX1BO60663 AL442224.1-201ENST00000443771 391 ntTSL 2 BASIC5.02□□□□□ -1.61
LMX1BO60663 AC005772.1-201ENST00000446671 976 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
LMX1BO60663 MORF4L1P4-201ENST00000450245 976 ntBASIC5.02□□□□□ -1.61
LMX1BO60663 TTC26-205ENST00000474035 1193 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
LMX1BO60663 EIF3LP3-201ENST00000495197 822 ntBASIC5.02□□□□□ -1.61
LMX1BO60663 CCDC169-211ENST00000503173 837 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
LMX1BO60663 AC105384.2-201ENST00000508433 640 ntBASIC5.02□□□□□ -1.61
LMX1BO60663 AC093815.1-201ENST00000508637 280 ntBASIC5.02□□□□□ -1.61
LMX1BO60663 RNA5SP362-201ENST00000516048 118 ntBASIC5.02□□□□□ -1.61
LMX1BO60663 AC026407.1-201ENST00000518369 204 ntBASIC5.02□□□□□ -1.61
LMX1BO60663 IGKV2-18-201ENST00000522607 343 ntBASIC5.02□□□□□ -1.61
LMX1BO60663 PCNAP4-201ENST00000532690 730 ntBASIC5.02□□□□□ -1.61
LMX1BO60663 ARPP19-205ENST00000563566 568 ntTSL 4 BASIC5.02□□□□□ -1.61
LMX1BO60663 PWRN1-206ENST00000565512 433 ntTSL 2 BASIC5.02□□□□□ -1.61
LMX1BO60663 MIR1273E-201ENST00000581165 102 ntBASIC5.02□□□□□ -1.61
LMX1BO60663 AC105094.2-202ENST00000590968 566 ntTSL 2 BASIC5.02□□□□□ -1.61
LMX1BO60663 AL589674.2-201ENST00000604304 337 ntBASIC5.02□□□□□ -1.61
LMX1BO60663 AC145423.1-201ENST00000605712 336 ntBASIC5.02□□□□□ -1.61
LMX1BO60663 LINC02343-201ENST00000605909 573 ntTSL 4 BASIC5.02□□□□□ -1.61
LMX1BO60663 AP000864.1-201ENST00000609424 650 ntBASIC5.02□□□□□ -1.61
LMX1BO60663 MIR6809-201ENST00000612189 116 ntBASIC5.02□□□□□ -1.61
LMX1BO60663 AC009120.7-201ENST00000623452 780 ntBASIC5.02□□□□□ -1.61
LMX1BO60663 IGLV10-54-202ENST00000640991 351 ntTSL 5 BASIC5.02□□□□□ -1.61
LMX1BO60663 ZNF480-204ENST00000490272 2238 ntTSL 2 BASIC5.02□□□□□ -1.61
LMX1BO60663 GTDC1-201ENST00000241391 2356 ntTSL 2 BASIC5.02□□□□□ -1.61
LMX1BO60663 NSF-206ENST00000575068 2667 ntTSL 2 BASIC5.02□□□□□ -1.61
LMX1BO60663 SPARCL1-202ENST00000418378 2994 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
LMX1BO60663 GAPVD1-206ENST00000394104 6737 ntTSL 2 BASIC5.02□□□□□ -1.61
LMX1BO60663 ZNF345-215ENST00000614069 3103 ntAPPRIS P1 TSL 3 BASIC5.02□□□□□ -1.61
LMX1BO60663 UNC80-203ENST00000439458 13562 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
LMX1BO60663 ZNF682-201ENST00000358523 2161 ntTSL 2 BASIC5.02□□□□□ -1.61
LMX1BO60663 IKZF2-201ENST00000342002 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC5.02□□□□□ -1.61
LMX1BO60663 AL161912.4-201ENST00000623889 2468 ntBASIC5.02□□□□□ -1.61
LMX1BO60663 KCNH5-201ENST00000322893 11290 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
LMX1BO60663 PDE4D-216ENST00000507116 3350 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
LMX1BO60663 AC099654.3-201ENST00000447087 1546 ntBASIC5.02□□□□□ -1.61
LMX1BO60663 AC020656.2-201ENST00000613291 5309 ntBASIC5.02□□□□□ -1.61
LMX1BO60663 PLS3-201ENST00000289290 2277 ntTSL 2 BASIC5.02□□□□□ -1.61
LMX1BO60663 ZNF214-204ENST00000536068 2562 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
LMX1BO60663 AL355488.2-201ENST00000609909 2850 ntBASIC5.02□□□□□ -1.61
LMX1BO60663 ZNF492-201ENST00000456783 4245 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
LMX1BO60663 GNG2-212ENST00000556752 3424 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
LMX1BO60663 AC006600.2-201ENST00000624834 2506 ntBASIC5.01□□□□□ -1.61
LMX1BO60663 RAP1GDS1-202ENST00000339360 2092 ntAPPRIS ALT1 TSL 1 (best) BASIC5.01□□□□□ -1.61
LMX1BO60663 AC027088.4-201ENST00000611559 1947 ntBASIC5.01□□□□□ -1.61
LMX1BO60663 ADGB-205ENST00000397944 5325 ntAPPRIS P5 TSL 5 BASIC5.01□□□□□ -1.61
LMX1BO60663 PSG4-201ENST00000244295 1629 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
LMX1BO60663 KSR2-201ENST00000339824 17726 ntAPPRIS P1 TSL 5 BASIC5.01□□□□□ -1.61
LMX1BO60663 AL358975.1-203ENST00000413352 2932 ntTSL 3 BASIC5.01□□□□□ -1.61
LMX1BO60663 FHL5-201ENST00000326771 2031 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
LMX1BO60663 PDE10A-203ENST00000539869 4401 ntAPPRIS ALT2 TSL 1 (best) BASIC5.01□□□□□ -1.61
LMX1BO60663 AL158152.1-201ENST00000602652 1435 ntBASIC5.01□□□□□ -1.61
LMX1BO60663 REP15-201ENST00000310791 1078 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
LMX1BO60663 SSX5-202ENST00000347757 1261 ntAPPRIS ALT2 TSL 5 BASIC5.01□□□□□ -1.61
LMX1BO60663 AL353751.1-201ENST00000354541 495 ntTSL 3 BASIC5.01□□□□□ -1.61
LMX1BO60663 MIR375-201ENST00000362103 64 ntBASIC5.01□□□□□ -1.61
LMX1BO60663 CXorf66-201ENST00000370540 1281 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
LMX1BO60663 PPCS-201ENST00000372556 984 ntTSL 2 BASIC5.01□□□□□ -1.61
LMX1BO60663 SSX5-203ENST00000376923 1208 ntAPPRIS ALT2 TSL 5 BASIC5.01□□□□□ -1.61
LMX1BO60663 OR2A25-201ENST00000408898 1014 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
LMX1BO60663 FIGN-202ENST00000409634 746 ntTSL 5 BASIC5.01□□□□□ -1.61
LMX1BO60663 KCNJ13-202ENST00000409779 1099 ntTSL 2 BASIC5.01□□□□□ -1.61
LMX1BO60663 RN7SKP279-201ENST00000411383 298 ntBASIC5.01□□□□□ -1.61
LMX1BO60663 OR2AT2P-201ENST00000413438 905 ntBASIC5.01□□□□□ -1.61
LMX1BO60663 BX284656.2-201ENST00000414483 498 ntTSL 2 BASIC5.01□□□□□ -1.61
LMX1BO60663 LINC01945-201ENST00000419784 840 ntTSL 2 BASIC5.01□□□□□ -1.61
LMX1BO60663 AL390243.1-201ENST00000422038 708 ntTSL 2 BASIC5.01□□□□□ -1.61
LMX1BO60663 Z80107.1-201ENST00000436830 412 ntBASIC5.01□□□□□ -1.61
LMX1BO60663 AC007327.2-201ENST00000440788 457 ntTSL 3 BASIC5.01□□□□□ -1.61
LMX1BO60663 AP000281.1-201ENST00000444036 316 ntBASIC5.01□□□□□ -1.61
LMX1BO60663 AC022387.1-201ENST00000444770 794 ntTSL 3 BASIC5.01□□□□□ -1.61
LMX1BO60663 RNU1-88P-201ENST00000459274 128 ntBASIC5.01□□□□□ -1.61
LMX1BO60663 DUTP1-201ENST00000493631 470 ntBASIC5.01□□□□□ -1.61
LMX1BO60663 LINC00632-202ENST00000498732 746 ntTSL 3 BASIC5.01□□□□□ -1.61
LMX1BO60663 AC111000.6-201ENST00000514471 709 ntBASIC5.01□□□□□ -1.61
LMX1BO60663 SNORA70.20-201ENST00000516848 126 ntBASIC5.01□□□□□ -1.61
LMX1BO60663 AC023632.5-201ENST00000521010 491 ntTSL 3 BASIC5.01□□□□□ -1.61
LMX1BO60663 IGLVIV-66-1-201ENST00000521832 460 ntBASIC5.01□□□□□ -1.61
LMX1BO60663 YWHAZ-220ENST00000522819 875 ntTSL 3 BASIC5.01□□□□□ -1.61
LMX1BO60663 LINC01033-204ENST00000523194 715 ntTSL 2 BASIC5.01□□□□□ -1.61
LMX1BO60663 OR8Q1P-201ENST00000526467 655 ntBASIC5.01□□□□□ -1.61
LMX1BO60663 LDHC-205ENST00000537486 583 ntTSL 5 BASIC5.01□□□□□ -1.61
LMX1BO60663 MGAT4C-206ENST00000552435 550 ntTSL 4 BASIC5.01□□□□□ -1.61
LMX1BO60663 AC087286.2-201ENST00000558980 660 ntTSL 3 BASIC5.01□□□□□ -1.61
LMX1BO60663 AC010547.6-201ENST00000571789 193 ntBASIC5.01□□□□□ -1.61
LMX1BO60663 AC022031.2-203ENST00000587346 565 ntTSL 4 BASIC5.01□□□□□ -1.61
LMX1BO60663 FAM27E4-201ENST00000605259 342 ntBASIC5.01□□□□□ -1.61
LMX1BO60663 AL136131.3-201ENST00000607600 188 ntBASIC5.01□□□□□ -1.61
LMX1BO60663 AC211433.2-201ENST00000608433 387 ntBASIC5.01□□□□□ -1.61
LMX1BO60663 AC015712.7-201ENST00000615211 635 ntBASIC5.01□□□□□ -1.61
LMX1BO60663 Metazoa_SRP.179-201ENST00000619020 241 ntBASIC5.01□□□□□ -1.61
LMX1BO60663 AL035661.1-201ENST00000620459 1144 ntBASIC5.01□□□□□ -1.61
LMX1BO60663 OR2L8-201ENST00000623922 939 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
LMX1BO60663 AL691477.1-201ENST00000624398 162 ntBASIC5.01□□□□□ -1.61
LMX1BO60663 AC010608.3-201ENST00000625048 527 ntBASIC5.01□□□□□ -1.61
LMX1BO60663 AC245187.2-201ENST00000631520 475 ntTSL 3 BASIC5.01□□□□□ -1.61
LMX1BO60663 MIR193BHG-214ENST00000641765 509 ntBASIC5.01□□□□□ -1.61
LMX1BO60663 CACNB4-243ENST00000637217 8188 ntTSL 5 BASIC5.01□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 67.9 ms