Protein–RNA interactions for Protein: O00409

FOXN3, Forkhead box protein N3, humanhuman

Predicted RBP Predictions only

Length 490 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3O00409 ATF2-212ENST00000426833 4132 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.41
FOXN3O00409 CASP1-208ENST00000527979 1521 ntTSL 5 BASIC6.21□□□□□ -1.42
FOXN3O00409 MTCO1P15-201ENST00000529569 1526 ntBASIC6.21□□□□□ -1.42
FOXN3O00409 FYB1-204ENST00000505428 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC6.21□□□□□ -1.42
FOXN3O00409 MAK-204ENST00000536370 3767 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
FOXN3O00409 ADGRF1-203ENST00000371253 5468 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
FOXN3O00409 MCMDC2-204ENST00000422365 5096 ntAPPRIS P1 TSL 2 BASIC6.21□□□□□ -1.42
FOXN3O00409 SLC4A4-202ENST00000340595 7640 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
FOXN3O00409 ELOC-201ENST00000284811 683 ntAPPRIS P1 TSL 3 BASIC6.21□□□□□ -1.42
FOXN3O00409 OR56A3-201ENST00000329564 948 ntAPPRIS P1 BASIC6.21□□□□□ -1.42
FOXN3O00409 TYRP1-201ENST00000381136 872 ntTSL 2 BASIC6.21□□□□□ -1.42
FOXN3O00409 RNU6-1000P-201ENST00000391066 106 ntBASIC6.21□□□□□ -1.42
FOXN3O00409 U3.23-201ENST00000391132 200 ntBASIC6.21□□□□□ -1.42
FOXN3O00409 AL590806.1-201ENST00000415818 853 ntBASIC6.21□□□□□ -1.42
FOXN3O00409 AL158050.1-201ENST00000416077 457 ntBASIC6.21□□□□□ -1.42
FOXN3O00409 PTP4A1P1-201ENST00000420539 515 ntBASIC6.21□□□□□ -1.42
FOXN3O00409 AL603910.1-201ENST00000423099 370 ntTSL 3 BASIC6.21□□□□□ -1.42
FOXN3O00409 BX119904.1-201ENST00000432026 348 ntBASIC6.21□□□□□ -1.42
FOXN3O00409 NDUFS5P5-201ENST00000437256 321 ntBASIC6.21□□□□□ -1.42
FOXN3O00409 AC110602.1-201ENST00000437414 318 ntBASIC6.21□□□□□ -1.42
FOXN3O00409 DNAJC19P5-201ENST00000443295 316 ntBASIC6.21□□□□□ -1.42
FOXN3O00409 AC006019.3-201ENST00000446335 698 ntTSL 3 BASIC6.21□□□□□ -1.42
FOXN3O00409 AC132807.1-201ENST00000449613 458 ntTSL 3 BASIC6.21□□□□□ -1.42
FOXN3O00409 AC092691.2-201ENST00000461787 803 ntBASIC6.21□□□□□ -1.42
FOXN3O00409 LINC02000-201ENST00000483245 640 ntTSL 2 BASIC6.21□□□□□ -1.42
FOXN3O00409 HAX1-208ENST00000483970 1151 ntTSL 2 BASIC6.21□□□□□ -1.42
FOXN3O00409 RN7SL57P-201ENST00000493687 290 ntBASIC6.21□□□□□ -1.42
FOXN3O00409 AC092666.1-203ENST00000495144 698 ntTSL 5 BASIC6.21□□□□□ -1.42
FOXN3O00409 AC105384.2-201ENST00000508433 640 ntBASIC6.21□□□□□ -1.42
FOXN3O00409 SCARNA18.1-201ENST00000516330 83 ntBASIC6.21□□□□□ -1.42
FOXN3O00409 RNA5SP438-201ENST00000516561 112 ntBASIC6.21□□□□□ -1.42
FOXN3O00409 MTCYBP19-201ENST00000517463 1124 ntBASIC6.21□□□□□ -1.42
FOXN3O00409 WASHC5-AS1-201ENST00000519140 587 ntTSL 4 BASIC6.21□□□□□ -1.42
FOXN3O00409 POLR2K-203ENST00000522439 543 ntTSL 2 BASIC6.21□□□□□ -1.42
FOXN3O00409 AC109635.6-201ENST00000525487 1113 ntBASIC6.21□□□□□ -1.42
FOXN3O00409 AP001978.1-201ENST00000526851 834 ntTSL 2 BASIC6.21□□□□□ -1.42
FOXN3O00409 AC087888.1-201ENST00000550884 1254 ntBASIC6.21□□□□□ -1.42
FOXN3O00409 AF230666.2-201ENST00000602328 725 ntBASIC6.21□□□□□ -1.42
FOXN3O00409 AL670729.3-201ENST00000602345 574 ntTSL 4 BASIC6.21□□□□□ -1.42
FOXN3O00409 AC084373.1-201ENST00000603311 235 ntBASIC6.21□□□□□ -1.42
FOXN3O00409 AC079880.2-201ENST00000603790 1213 ntBASIC6.21□□□□□ -1.42
FOXN3O00409 AC112503.2-201ENST00000609005 552 ntBASIC6.21□□□□□ -1.42
FOXN3O00409 Z95327.3-201ENST00000610385 572 ntBASIC6.21□□□□□ -1.42
FOXN3O00409 AC022400.9-201ENST00000623633 273 ntBASIC6.21□□□□□ -1.42
FOXN3O00409 AC073592.6-201ENST00000624271 415 ntBASIC6.21□□□□□ -1.42
FOXN3O00409 AC084816.1-212ENST00000625240 1114 ntTSL 5 BASIC6.21□□□□□ -1.42
FOXN3O00409 LINC00506-201ENST00000628435 525 ntTSL 4 BASIC6.21□□□□□ -1.42
FOXN3O00409 OR8A1-204ENST00000642111 1145 ntBASIC6.21□□□□□ -1.42
FOXN3O00409 CHST9-203ENST00000618847 11388 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
FOXN3O00409 AC089984.1-201ENST00000552780 1431 ntTSL 3 BASIC6.21□□□□□ -1.42
FOXN3O00409 AC004076.2-201ENST00000620532 3323 ntBASIC6.21□□□□□ -1.42
FOXN3O00409 ANKRD31-203ENST00000506364 6207 ntAPPRIS ALT2 TSL 5 BASIC6.21□□□□□ -1.42
FOXN3O00409 CCR5-201ENST00000292303 3450 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
FOXN3O00409 AL121594.3-201ENST00000557565 3857 ntAPPRIS P1 TSL 2 BASIC6.21□□□□□ -1.42
FOXN3O00409 GRIK2-203ENST00000369134 4185 ntTSL 5 BASIC6.21□□□□□ -1.42
FOXN3O00409 LEPR-208ENST00000616738 5081 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
FOXN3O00409 AC232271.1-201ENST00000602455 2715 ntBASIC6.2□□□□□ -1.42
FOXN3O00409 PTPRD-214ENST00000540109 6210 ntAPPRIS P1 TSL 5 BASIC6.2□□□□□ -1.42
FOXN3O00409 RNMT-201ENST00000262173 6051 ntAPPRIS P1 TSL 2 BASIC6.2□□□□□ -1.42
FOXN3O00409 AC015799.1-201ENST00000622996 3122 ntBASIC6.2□□□□□ -1.42
FOXN3O00409 ZNF850-202ENST00000591344 7714 ntAPPRIS P3 TSL 1 (best) BASIC6.2□□□□□ -1.42
FOXN3O00409 AL158152.1-201ENST00000602652 1435 ntBASIC6.2□□□□□ -1.42
FOXN3O00409 BPY2-201ENST00000331070 1206 ntAPPRIS P5 TSL 1 (best) BASIC6.2□□□□□ -1.42
FOXN3O00409 RNA5SP477-201ENST00000362639 119 ntBASIC6.2□□□□□ -1.42
FOXN3O00409 RNU6-249P-201ENST00000363016 102 ntBASIC6.2□□□□□ -1.42
FOXN3O00409 RNA5SP500-201ENST00000364486 119 ntBASIC6.2□□□□□ -1.42
FOXN3O00409 BPY2C-201ENST00000382287 1206 ntAPPRIS P5 TSL 1 (best) BASIC6.2□□□□□ -1.42
FOXN3O00409 BPY2B-201ENST00000382392 1206 ntAPPRIS P5 TSL 1 (best) BASIC6.2□□□□□ -1.42
FOXN3O00409 TRAJ25-201ENST00000390512 60 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
FOXN3O00409 RPL31-206ENST00000409650 770 ntAPPRIS ALT1 TSL 2 BASIC6.2□□□□□ -1.42
FOXN3O00409 RN7SKP17-201ENST00000411242 351 ntBASIC6.2□□□□□ -1.42
FOXN3O00409 MRPL53P1-201ENST00000414323 319 ntBASIC6.2□□□□□ -1.42
FOXN3O00409 AC063965.1-201ENST00000416679 499 ntTSL 3 BASIC6.2□□□□□ -1.42
FOXN3O00409 RPS26P13-201ENST00000419030 330 ntBASIC6.2□□□□□ -1.42
FOXN3O00409 AL360093.1-201ENST00000420237 1126 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
FOXN3O00409 AL606495.1-201ENST00000422100 813 ntBASIC6.2□□□□□ -1.42
FOXN3O00409 VN1R42P-201ENST00000424651 344 ntBASIC6.2□□□□□ -1.42
FOXN3O00409 AC011242.1-201ENST00000433596 1158 ntBASIC6.2□□□□□ -1.42
FOXN3O00409 AC242426.1-201ENST00000435270 960 ntBASIC6.2□□□□□ -1.42
FOXN3O00409 AL157827.1-201ENST00000447622 132 ntBASIC6.2□□□□□ -1.42
FOXN3O00409 TMEM247-203ENST00000449601 741 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
FOXN3O00409 Z83838.1-202ENST00000456225 839 ntBASIC6.2□□□□□ -1.42
FOXN3O00409 AK6-203ENST00000502819 743 ntTSL 5 BASIC6.2□□□□□ -1.42
FOXN3O00409 AC104078.2-201ENST00000504344 541 ntTSL 5 BASIC6.2□□□□□ -1.42
FOXN3O00409 LINC02432-203ENST00000511213 719 ntTSL 2 BASIC6.2□□□□□ -1.42
FOXN3O00409 AC011405.1-204ENST00000512875 731 ntTSL 5 BASIC6.2□□□□□ -1.42
FOXN3O00409 OR5H7P-201ENST00000514084 930 ntBASIC6.2□□□□□ -1.42
FOXN3O00409 RNU5A-7P-201ENST00000515979 116 ntBASIC6.2□□□□□ -1.42
FOXN3O00409 AC139365.2-201ENST00000517972 253 ntBASIC6.2□□□□□ -1.42
FOXN3O00409 AC091185.1-201ENST00000523840 528 ntTSL 3 BASIC6.2□□□□□ -1.42
FOXN3O00409 AC027369.2-201ENST00000528030 440 ntBASIC6.2□□□□□ -1.42
FOXN3O00409 AC002056.2-201ENST00000532913 284 ntTSL 5 BASIC6.2□□□□□ -1.42
FOXN3O00409 AC087286.2-201ENST00000558980 660 ntTSL 3 BASIC6.2□□□□□ -1.42
FOXN3O00409 AC005695.2-201ENST00000579641 259 ntTSL 3 BASIC6.2□□□□□ -1.42
FOXN3O00409 HIRAP1-201ENST00000605318 787 ntBASIC6.2□□□□□ -1.42
FOXN3O00409 LINC02343-201ENST00000605909 573 ntTSL 4 BASIC6.2□□□□□ -1.42
FOXN3O00409 AL035661.1-201ENST00000620459 1144 ntBASIC6.2□□□□□ -1.42
FOXN3O00409 AC068880.4-201ENST00000623082 495 ntBASIC6.2□□□□□ -1.42
FOXN3O00409 AC099654.8-201ENST00000637757 681 ntBASIC6.2□□□□□ -1.42
FOXN3O00409 AL445984.1-201ENST00000637834 659 ntBASIC6.2□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 72.6 ms